7 |
9.272e-06 |
0.004211 |
pa1571 |
N/A |
-18.24 |
0.000884 |
168 -- 194 |
96 -- 121 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________167_________________________195\n_____________|___________________________|\n5'-CGG...UCCCU______CC___AAA_____________CGGGC...AGA-3'\n______________AGACUG__GAU___CCUGAUGAGGAGA\n______________|:||:|__|||___|||||||||||||\n______________UUUGGC__CUA___GGACUACUCCUCU\n3'-UUU...CAGUU______A____AUC_____________AUUAG...GUU-5'\n_____________|___________________________|\n_____________122_________________________95\n |
188 -- 194 |
96 -- 102 |
-30.1565 kcal/mol |
6.37386 kcal/mol |
5.54718 kcal/mol |
167 195@LB@ | |@LB@5'-CGG...UCCCU CC AAA CGGGC...AGA-3'@LB@ AGACUG GAU CCUGAUGAGGAGA@LB@ |:||:| ||| |||||||||||||@LB@ UUUGGC CUA GGACUACUCCUCU@LB@3'-UUU...CAGUU A AUC AUUAG...GUU-5'@LB@ | |@LB@ 122 95@LB@@LB@@LB@Energy -18.24 kcal/mol@LB@Hybridization Energy -30.1565 kcal/mol@LB@Unfolding Energy - mRNA 6.37386 kcal/mol@LB@Unfolding Energy - sRNA 5.54718 kcal/mol@LB@@LB@Position - mRNA 168 -- 194@LB@Position - sRNA 96 -- 121@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 96 -- 102@LB@ |
33 |
8.454e-05 |
0.01177 |
pa3481 |
N/A |
-18.00 |
0.001084 |
15 -- 90 |
50 -- 121 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________14_________________________________________________________________________________91\n_____________|__________________________________________________________________________________|\n5'-GUC...GAAUG______________G_A_________GCG_____UAACGAG___CU_______U__GGACAUGGGU________________GAGCU...AGG-3'\n______________GAACCGU___UGGC_U___GGGGAGG____CUGG_______GAU__UGCGUGG_UC__________UCGGCUUAUCGGCUGA\n______________:||||||___|:||_|___|:||||:____|||:_______||:__|||||||_||__________||:|||||:|||||||\n______________UUUGGCA___AUCG_A___CUCCUCU____GACU_______CUG__ACGCACC_AG__________AGUCGAAUGGCCGACU\n3'-UUU...CAGUU_______CUA____G_CUA_______AUUA____UCUCAGG____________C__AG________________________AGAGC...GUU-5'\n_____________|__________________________________________________________________________________|\n_____________122________________________________________________________________________________49\n |
84 -- 90 |
50 -- 56 |
-67.3131 kcal/mol |
26.9383 kcal/mol |
22.3832 kcal/mol |
14 91@LB@ | |@LB@5'-GUC...GAAUG G A GCG UAACGAG CU U GGACAUGGGU GAGCU...AGG-3'@LB@ GAACCGU UGGC U GGGGAGG CUGG GAU UGCGUGG UC UCGGCUUAUCGGCUGA@LB@ :|||||| |:|| | |:||||: |||: ||: ||||||| || ||:|||||:|||||||@LB@ UUUGGCA AUCG A CUCCUCU GACU CUG ACGCACC AG AGUCGAAUGGCCGACU@LB@3'-UUU...CAGUU CUA G CUA AUUA UCUCAGG C AG AGAGC...GUU-5'@LB@ | |@LB@ 122 49@LB@@LB@@LB@Energy -18.00 kcal/mol@LB@Hybridization Energy -67.3131 kcal/mol@LB@Unfolding Energy - mRNA 26.9383 kcal/mol@LB@Unfolding Energy - sRNA 22.3832 kcal/mol@LB@@LB@Position - mRNA 15 -- 90@LB@Position - sRNA 50 -- 121@LB@Position Seed - mRNA 84 -- 90@LB@Position Seed - sRNA 50 -- 56@LB@ |
16 |
3.003e-05 |
0.008352 |
pa2689 |
N/A |
-17.00 |
0.002414 |
189 -- 205 |
100 -- 117 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________188________________206\n_____________|__________________|\n5'-CGG...CAUAA__A__A____________AACCU...UGG-3'\n______________CG_GA__AGCCUGAUGAG\n______________||_||__|||||||||||\n______________GC_CU__UCGGACUACUC\n3'-UUU...UUUUG__A__AA___________CUCUA...GUU-5'\n_____________|__________________|\n_____________118________________99\n |
199 -- 205 |
100 -- 106 |
-22.2469 kcal/mol |
3.0121 kcal/mol |
2.23711 kcal/mol |
188 206@LB@ | |@LB@5'-CGG...CAUAA A A AACCU...UGG-3'@LB@ CG GA AGCCUGAUGAG@LB@ || || |||||||||||@LB@ GC CU UCGGACUACUC@LB@3'-UUU...UUUUG A AA CUCUA...GUU-5'@LB@ | |@LB@ 118 99@LB@@LB@@LB@Energy -17.00 kcal/mol@LB@Hybridization Energy -22.2469 kcal/mol@LB@Unfolding Energy - mRNA 3.0121 kcal/mol@LB@Unfolding Energy - sRNA 2.23711 kcal/mol@LB@@LB@Position - mRNA 189 -- 205@LB@Position - sRNA 100 -- 117@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 100 -- 106@LB@ |
87 |
0.001101 |
0.05816 |
pa1343 |
N/A |
-16.83 |
0.002748 |
192 -- 238 |
44 -- 87 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________191______________________________________________239\n_____________|________________________________________________|\n5'-UCG...CGCCU_______CCA____CUA_____AUCC_____C_______C_UG_____CGCAC...CCC-3'\n______________GGAGUCC___UGCG____UCUC____UCAGC_UGCUGGC_G__CUCGC\n______________:||||||___||||____||||____|||||_|:|:|||_|__|||||\n______________UCUCAGG___ACGC____AGAG____AGUCG_AUGGCCG_C__GAGCG\n3'-UUU...AGACU_______CUG____ACCC_____________A_______A_UA_____CUGGU...GUU-5'\n_____________|________________________________________________|\n_____________88_______________________________________________43\n |
192 -- 198 |
81 -- 87 |
-49.5275 kcal/mol |
13.8321 kcal/mol |
18.8647 kcal/mol |
191 239@LB@ | |@LB@5'-UCG...CGCCU CCA CUA AUCC C C UG CGCAC...CCC-3'@LB@ GGAGUCC UGCG UCUC UCAGC UGCUGGC G CUCGC@LB@ :|||||| |||| |||| ||||| |:|:||| | |||||@LB@ UCUCAGG ACGC AGAG AGUCG AUGGCCG C GAGCG@LB@3'-UUU...AGACU CUG ACCC A A UA CUGGU...GUU-5'@LB@ | |@LB@ 88 43@LB@@LB@@LB@Energy -16.83 kcal/mol@LB@Hybridization Energy -49.5275 kcal/mol@LB@Unfolding Energy - mRNA 13.8321 kcal/mol@LB@Unfolding Energy - sRNA 18.8647 kcal/mol@LB@@LB@Position - mRNA 192 -- 238@LB@Position - sRNA 44 -- 87@LB@Position Seed - mRNA 192 -- 198@LB@Position Seed - sRNA 81 -- 87@LB@ |
197 |
0.005405 |
0.1261 |
pa2580 |
N/A |
-16.79 |
0.002834 |
13 -- 30 |
70 -- 88 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________12__________________31\n_____________|___________________|\n5'-GUG...UCAUC___________________GGCGC...ACC-3'\n______________GAGGG_CUGGCUGCGUGGG\n______________:||:|_|:|:|||||||||\n______________UUCUC_GGCUGACGCACCC\n3'-UUU...UAGAC_____A_____________AGAGA...GUU-5'\n_____________|___________________|\n_____________89__________________69\n |
24 -- 30 |
70 -- 76 |
-30.7983 kcal/mol |
8.14478 kcal/mol |
5.86376 kcal/mol |
12 31@LB@ | |@LB@5'-GUG...UCAUC GGCGC...ACC-3'@LB@ GAGGG CUGGCUGCGUGGG@LB@ :||:| |:|:|||||||||@LB@ UUCUC GGCUGACGCACCC@LB@3'-UUU...UAGAC A AGAGA...GUU-5'@LB@ | |@LB@ 89 69@LB@@LB@@LB@Energy -16.79 kcal/mol@LB@Hybridization Energy -30.7983 kcal/mol@LB@Unfolding Energy - mRNA 8.14478 kcal/mol@LB@Unfolding Energy - sRNA 5.86376 kcal/mol@LB@@LB@Position - mRNA 13 -- 30@LB@Position - sRNA 70 -- 88@LB@Position Seed - mRNA 24 -- 30@LB@Position Seed - sRNA 70 -- 76@LB@ |
70 |
0.0007568 |
0.0493 |
pa3767 |
N/A |
-16.77 |
0.002880 |
160 -- 178 |
98 -- 122 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________159_______________________179\n_____________|_________________________|\n5'-CAU...AUAUG_________________________CCAUC...GCG-3'\n______________GAGACCG______GCCUGAUGGGGA\n______________:|:||||______||||||||:|||\n______________UUUUGGC______CGGACUACUCCU\n3'-UUU...CCAGU_______ACUAAU____________CUAUU...GUU-5'\n_____________|_________________________|\n_____________123_______________________97\n |
172 -- 178 |
98 -- 104 |
-28.0357 kcal/mol |
9.01481 kcal/mol |
2.25226 kcal/mol |
159 179@LB@ | |@LB@5'-CAU...AUAUG CCAUC...GCG-3'@LB@ GAGACCG GCCUGAUGGGGA@LB@ :|:|||| ||||||||:|||@LB@ UUUUGGC CGGACUACUCCU@LB@3'-UUU...CCAGU ACUAAU CUAUU...GUU-5'@LB@ | |@LB@ 123 97@LB@@LB@@LB@Energy -16.77 kcal/mol@LB@Hybridization Energy -28.0357 kcal/mol@LB@Unfolding Energy - mRNA 9.01481 kcal/mol@LB@Unfolding Energy - sRNA 2.25226 kcal/mol@LB@@LB@Position - mRNA 160 -- 178@LB@Position - sRNA 98 -- 122@LB@Position Seed - mRNA 172 -- 178@LB@Position Seed - sRNA 98 -- 104@LB@ |
73 |
0.0008061 |
0.04991 |
pa0112 |
N/A |
-16.64 |
0.003170 |
93 -- 149 |
38 -- 90 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________92__________________________________________________________150\n_____________|___________________________________________________________|\n5'-CGG...GCUGC______AC__G_A________CUCAAG________A____________GG_________CGCGG...CCC-3'\n______________UGAAGG__GU_C_ACUGC_UG______CUCUC_GC_UAUCGGUUGAUC__CGUGGCCGG\n______________|||||:__||_|_|||||_||______|||||_||_||:|||:|||||__||:|:||:|\n______________ACUUCU__CA_G_UGACG_AC______GAGAG_CG_AUGGCCGACUAG__GCGCUGGUC\n3'-UUU...AUUAG__________G_C_____C__CCA________U__A____________A__________AACUC...GUU-5'\n_____________|___________________________________________________________|\n_____________91__________________________________________________________37\n |
141 -- 147 |
40 -- 46 |
-57.3106 kcal/mol |
21.635 kcal/mol |
19.0336 kcal/mol |
92 150@LB@ | |@LB@5'-CGG...GCUGC AC G A CUCAAG A GG CGCGG...CCC-3'@LB@ UGAAGG GU C ACUGC UG CUCUC GC UAUCGGUUGAUC CGUGGCCGG@LB@ |||||: || | ||||| || ||||| || ||:|||:||||| ||:|:||:|@LB@ ACUUCU CA G UGACG AC GAGAG CG AUGGCCGACUAG GCGCUGGUC@LB@3'-UUU...AUUAG G C C CCA U A A AACUC...GUU-5'@LB@ | |@LB@ 91 37@LB@@LB@@LB@Energy -16.64 kcal/mol@LB@Hybridization Energy -57.3106 kcal/mol@LB@Unfolding Energy - mRNA 21.635 kcal/mol@LB@Unfolding Energy - sRNA 19.0336 kcal/mol@LB@@LB@Position - mRNA 93 -- 149@LB@Position - sRNA 38 -- 90@LB@Position Seed - mRNA 141 -- 147@LB@Position Seed - sRNA 40 -- 46@LB@ |
55 |
0.0004353 |
0.03637 |
pa0086 |
N/A |
-16.64 |
0.003171 |
21 -- 37 |
100 -- 117 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________20_________________38\n_____________|__________________|\n5'-GGC...CAGAA____CA____________CCGGC...ACG-3'\n______________CGUG___GGCCUGAUGAG\n______________||||___:||||||||||\n______________GCAC___UCGGACUACUC\n3'-UUU...UUUUG____UAA___________CUCUA...GUU-5'\n_____________|__________________|\n_____________118________________99\n |
31 -- 37 |
100 -- 106 |
-24.5052 kcal/mol |
5.62761 kcal/mol |
2.23711 kcal/mol |
20 38@LB@ | |@LB@5'-GGC...CAGAA CA CCGGC...ACG-3'@LB@ CGUG GGCCUGAUGAG@LB@ |||| :||||||||||@LB@ GCAC UCGGACUACUC@LB@3'-UUU...UUUUG UAA CUCUA...GUU-5'@LB@ | |@LB@ 118 99@LB@@LB@@LB@Energy -16.64 kcal/mol@LB@Hybridization Energy -24.5052 kcal/mol@LB@Unfolding Energy - mRNA 5.62761 kcal/mol@LB@Unfolding Energy - sRNA 2.23711 kcal/mol@LB@@LB@Position - mRNA 21 -- 37@LB@Position - sRNA 100 -- 117@LB@Position Seed - mRNA 31 -- 37@LB@Position Seed - sRNA 100 -- 106@LB@ |
22 |
5.562e-05 |
0.01105 |
pa2264 |
N/A |
-16.58 |
0.003334 |
170 -- 193 |
98 -- 122 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________169_______________________194\n_____________|_________________________|\n5'-CCU...AAGAC___________GAU__A________CCCCA...AUG-3'\n______________GAAACCGUGAU___CC_GA_GAGGA\n______________:||||||||||___||_||_|||||\n______________UUUUGGCACUA___GG_CU_CUCCU\n3'-UUU...CCAGU___________AUC__A__A_____CUAUU...GUU-5'\n_____________|_________________________|\n_____________123_______________________97\n |
174 -- 180 |
112 -- 118 |
-25.8581 kcal/mol |
7.03089 kcal/mol |
2.25226 kcal/mol |
169 194@LB@ | |@LB@5'-CCU...AAGAC GAU A CCCCA...AUG-3'@LB@ GAAACCGUGAU CC GA GAGGA@LB@ :|||||||||| || || |||||@LB@ UUUUGGCACUA GG CU CUCCU@LB@3'-UUU...CCAGU AUC A A CUAUU...GUU-5'@LB@ | |@LB@ 123 97@LB@@LB@@LB@Energy -16.58 kcal/mol@LB@Hybridization Energy -25.8581 kcal/mol@LB@Unfolding Energy - mRNA 7.03089 kcal/mol@LB@Unfolding Energy - sRNA 2.25226 kcal/mol@LB@@LB@Position - mRNA 170 -- 193@LB@Position - sRNA 98 -- 122@LB@Position Seed - mRNA 174 -- 180@LB@Position Seed - sRNA 112 -- 118@LB@ |
187 |
0.004933 |
0.1213 |
pa0613 |
N/A |
-16.40 |
0.003821 |
197 -- 220 |
101 -- 120 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________196______________________221\n_____________|________________________|\n5'-GAC...GACAC_________CAA____AUC_____AAUGC...CCA-3'\n______________GACCGUGAU___AGCC___GAUGA\n______________:||||||||___||||___|||||\n______________UUGGCACUA___UCGG___CUACU\n3'-UUU...AGUUU_________A______A_______CCUCU...GUU-5'\n_____________|________________________|\n_____________121______________________100\n |
199 -- 205 |
112 -- 118 |
-24.1405 kcal/mol |
5.50451 kcal/mol |
2.2437 kcal/mol |
196 221@LB@ | |@LB@5'-GAC...GACAC CAA AUC AAUGC...CCA-3'@LB@ GACCGUGAU AGCC GAUGA@LB@ :|||||||| |||| |||||@LB@ UUGGCACUA UCGG CUACU@LB@3'-UUU...AGUUU A A CCUCU...GUU-5'@LB@ | |@LB@ 121 100@LB@@LB@@LB@Energy -16.40 kcal/mol@LB@Hybridization Energy -24.1405 kcal/mol@LB@Unfolding Energy - mRNA 5.50451 kcal/mol@LB@Unfolding Energy - sRNA 2.2437 kcal/mol@LB@@LB@Position - mRNA 197 -- 220@LB@Position - sRNA 101 -- 120@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 112 -- 118@LB@ |