39 |
0.00159 |
0.1292 |
b1637 |
tyrS |
-8.51 |
0.043578 |
178 -- 203 |
5 -- 27 |
tyrosyl-tRNA synthetase |
|
_____________177________________________204\n_____________|__________________________|\n5'-CAU...UGCAG_________A__U_______U_____GCAAG...CGA-3'\n______________UCGUUAUAU_CA_GGAGAUU_UGAUG\n______________||||||:|:_||_|||:||:_|||||\n______________AGCAAUGUG_GU_CCUUUAG_ACUAC\n3'-UUU...UUUUA__________________________ACAA-5'\n_____________|__________________________|\n_____________28_________________________4\n |
191 -- 197 |
10 -- 16 |
-22.7194 kcal/mol |
5.60368 kcal/mol |
8.60118 kcal/mol |
177 204@LB@ | |@LB@5'-CAU...UGCAG A U U GCAAG...CGA-3'@LB@ UCGUUAUAU CA GGAGAUU UGAUG@LB@ ||||||:|: || |||:||: |||||@LB@ AGCAAUGUG GU CCUUUAG ACUAC@LB@3'-UUU...UUUUA ACAA-5'@LB@ | |@LB@ 28 4@LB@@LB@@LB@Energy -8.51 kcal/mol@LB@Hybridization Energy -22.7194 kcal/mol@LB@Unfolding Energy - mRNA 5.60368 kcal/mol@LB@Unfolding Energy - sRNA 8.60118 kcal/mol@LB@@LB@Position - mRNA 178 -- 203@LB@Position - sRNA 5 -- 27@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 10 -- 16@LB@ |
63 |
0.003338 |
0.1645 |
b2671 |
ygaC |
-8.88 |
0.034356 |
231 -- 246 |
25 -- 40 |
uncharacterized protein |
|
_____________230______________247\n_____________|________________|\n5'-UAU...CGCGC____________G___GUUUU...AAA-3'\n______________GUACUUGAAAAA_UCG\n______________|:||||:|||||_|||\n______________CGUGAAUUUUUU_AGC\n3'-UUU...UUCUU____________A___AAUGU...CAA-5'\n_____________|________________|\n_____________41_______________24\n |
231 -- 237 |
34 -- 40 |
-15.9773 kcal/mol |
5.44668 kcal/mol |
1.64821 kcal/mol |
230 247@LB@ | |@LB@5'-UAU...CGCGC G GUUUU...AAA-3'@LB@ GUACUUGAAAAA UCG@LB@ |:||||:||||| |||@LB@ CGUGAAUUUUUU AGC@LB@3'-UUU...UUCUU A AAUGU...CAA-5'@LB@ | |@LB@ 41 24@LB@@LB@@LB@Energy -8.88 kcal/mol@LB@Hybridization Energy -15.9773 kcal/mol@LB@Unfolding Energy - mRNA 5.44668 kcal/mol@LB@Unfolding Energy - sRNA 1.64821 kcal/mol@LB@@LB@Position - mRNA 231 -- 246@LB@Position - sRNA 25 -- 40@LB@Position Seed - mRNA 231 -- 237@LB@Position Seed - sRNA 34 -- 40@LB@ |
145 |
0.01456 |
0.3231 |
b1529 |
marC |
-5.50 |
0.250589 |
206 -- 227 |
39 -- 59 |
UPF0056 family inner membrane protein |
|
_____________205____________________228\n_____________|______________________|\n5'-UGG...AUGUU__________A______UU___CUGGG...GCA-3'\n______________AGAUUUGUUU_AAGCAA__GGC\n______________|:|:|||:||_||||||__:||\n______________UUUGAACGAA_UUCGUU__UCG\n3'-UUU...CCUAC_________________CU___UGAAU...CAA-5'\n_____________|______________________|\n_____________60_____________________38\n |
207 -- 213 |
52 -- 58 |
-17.1508 kcal/mol |
5.49588 kcal/mol |
6.15149 kcal/mol |
205 228@LB@ | |@LB@5'-UGG...AUGUU A UU CUGGG...GCA-3'@LB@ AGAUUUGUUU AAGCAA GGC@LB@ |:|:|||:|| |||||| :||@LB@ UUUGAACGAA UUCGUU UCG@LB@3'-UUU...CCUAC CU UGAAU...CAA-5'@LB@ | |@LB@ 60 38@LB@@LB@@LB@Energy -5.50 kcal/mol@LB@Hybridization Energy -17.1508 kcal/mol@LB@Unfolding Energy - mRNA 5.49588 kcal/mol@LB@Unfolding Energy - sRNA 6.15149 kcal/mol@LB@@LB@Position - mRNA 206 -- 227@LB@Position - sRNA 39 -- 59@LB@Position Seed - mRNA 207 -- 213@LB@Position Seed - sRNA 52 -- 58@LB@ |
25 |
0.0007384 |
0.09021 |
b3434 |
yhgN |
-11.94 |
0.004015 |
159 -- 197 |
7 -- 41 |
UPF0056 family inner membrane protein |
|
_____________158_____________________________________198\n_____________|_______________________________________|\n5'-UUU...UUGUU_____GC_______CCG__GCAAU_______________GUUAU...CGA-3'\n______________AGCAC__AGAAAGU___CG_____UAUCAGGGAAUUUGA\n______________|||||__|:|||:|___||_____:|:||||:|||:|||\n______________UCGUG__UUUUUUA___GC_____GUGGUCCUUUAGACU\n3'-UUU...GUUCU_____AA_______A____AAU_________________ACACAA-5'\n_____________|_______________________________________|\n_____________42______________________________________6\n |
188 -- 194 |
10 -- 16 |
-30.001 kcal/mol |
8.83552 kcal/mol |
9.22092 kcal/mol |
158 198@LB@ | |@LB@5'-UUU...UUGUU GC CCG GCAAU GUUAU...CGA-3'@LB@ AGCAC AGAAAGU CG UAUCAGGGAAUUUGA@LB@ ||||| |:|||:| || :|:||||:|||:|||@LB@ UCGUG UUUUUUA GC GUGGUCCUUUAGACU@LB@3'-UUU...GUUCU AA A AAU ACACAA-5'@LB@ | |@LB@ 42 6@LB@@LB@@LB@Energy -11.94 kcal/mol@LB@Hybridization Energy -30.001 kcal/mol@LB@Unfolding Energy - mRNA 8.83552 kcal/mol@LB@Unfolding Energy - sRNA 9.22092 kcal/mol@LB@@LB@Position - mRNA 159 -- 197@LB@Position - sRNA 7 -- 41@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 10 -- 16@LB@ |
117 |
0.009786 |
0.2694 |
b1706 |
ydiU |
-6.16 |
0.177349 |
6 -- 27 |
36 -- 55 |
UPF0061 family protein |
|
_____________5______________________28\n_____________|______________________|\n______5'-UGCAA____AUCAUU____________GAUAC...AUA-3'\n______________UUGC______GCGGGAGGCAUU\n______________||||______||::||:|||:|\n______________AACG______CGUUCUUCGUGA\n3'-UUU...CUUUG____AAUU______________AUUUU...CAA-5'\n_____________|______________________|\n_____________56_____________________35\n |
21 -- 27 |
36 -- 42 |
-19.2761 kcal/mol |
6.93839 kcal/mol |
6.17795 kcal/mol |
5 28@LB@ | |@LB@ 5'-UGCAA AUCAUU GAUAC...AUA-3'@LB@ UUGC GCGGGAGGCAUU@LB@ |||| ||::||:|||:|@LB@ AACG CGUUCUUCGUGA@LB@3'-UUU...CUUUG AAUU AUUUU...CAA-5'@LB@ | |@LB@ 56 35@LB@@LB@@LB@Energy -6.16 kcal/mol@LB@Hybridization Energy -19.2761 kcal/mol@LB@Unfolding Energy - mRNA 6.93839 kcal/mol@LB@Unfolding Energy - sRNA 6.17795 kcal/mol@LB@@LB@Position - mRNA 6 -- 27@LB@Position - sRNA 36 -- 55@LB@Position Seed - mRNA 21 -- 27@LB@Position Seed - sRNA 36 -- 42@LB@ |
177 |
0.02045 |
0.3721 |
b3148 |
yraN |
-6.85 |
0.120614 |
263 -- 276 |
37 -- 54 |
UPF0102 family protein |
|
_____________262________________277\n_____________|__________________|\n5'-GGU...GGCGA__________________AAGCG...GCA-3'\n______________UGC____GUGGGAAGCAC\n______________|||____|:::|||||||\n______________ACG____CGUUCUUCGUG\n3'-UUU...UUUGA___AAUU___________AAUUU...CAA-5'\n_____________|__________________|\n_____________55_________________36\n |
270 -- 276 |
37 -- 43 |
-17.1481 kcal/mol |
4.14332 kcal/mol |
6.1584 kcal/mol |
262 277@LB@ | |@LB@5'-GGU...GGCGA AAGCG...GCA-3'@LB@ UGC GUGGGAAGCAC@LB@ ||| |:::|||||||@LB@ ACG CGUUCUUCGUG@LB@3'-UUU...UUUGA AAUU AAUUU...CAA-5'@LB@ | |@LB@ 55 36@LB@@LB@@LB@Energy -6.85 kcal/mol@LB@Hybridization Energy -17.1481 kcal/mol@LB@Unfolding Energy - mRNA 4.14332 kcal/mol@LB@Unfolding Energy - sRNA 6.1584 kcal/mol@LB@@LB@Position - mRNA 263 -- 276@LB@Position - sRNA 37 -- 54@LB@Position Seed - mRNA 270 -- 276@LB@Position Seed - sRNA 37 -- 43@LB@ |
122 |
0.01076 |
0.2828 |
b1908 |
yecA |
-7.65 |
0.074805 |
79 -- 96 |
18 -- 40 |
UPF0149 family protein |
|
_____________78_______________________97\n_____________|________________________|\n5'-UAC...UGCCU__A_____________________CUCCU...UGG-3'\n______________GC_ACUUG______UCGUUACACC\n______________||_||||:______||||||||||\n______________CG_UGAAU______AGCAAUGUGG\n3'-UUU...UUCUU________UUUUUA__________UCCUU...CAA-5'\n_____________|________________________|\n_____________41_______________________17\n |
90 -- 96 |
18 -- 24 |
-19.1188 kcal/mol |
2.30438 kcal/mol |
9.1639 kcal/mol |
78 97@LB@ | |@LB@5'-UAC...UGCCU A CUCCU...UGG-3'@LB@ GC ACUUG UCGUUACACC@LB@ || ||||: ||||||||||@LB@ CG UGAAU AGCAAUGUGG@LB@3'-UUU...UUCUU UUUUUA UCCUU...CAA-5'@LB@ | |@LB@ 41 17@LB@@LB@@LB@Energy -7.65 kcal/mol@LB@Hybridization Energy -19.1188 kcal/mol@LB@Unfolding Energy - mRNA 2.30438 kcal/mol@LB@Unfolding Energy - sRNA 9.1639 kcal/mol@LB@@LB@Position - mRNA 79 -- 96@LB@Position - sRNA 18 -- 40@LB@Position Seed - mRNA 90 -- 96@LB@Position Seed - sRNA 18 -- 24@LB@ |
43 |
0.001794 |
0.1344 |
b0631 |
ybeD |
-7.18 |
0.099343 |
171 -- 193 |
16 -- 40 |
UPF0250 family protein |
|
_____________170________________________194\n_____________|__________________________|\n5'-GCU...GAGUU__U______UUA______________AGCUG...AAG-3'\n______________GC_AUUUAA______CGUUACGCCGG\n______________||_|:||||______||||||:||:|\n______________CG_UGAAUU______GCAAUGUGGUC\n3'-UUU...UUCUU_________UUUUAA___________CUUUA...CAA-5'\n_____________|__________________________|\n_____________41_________________________15\n |
187 -- 193 |
16 -- 22 |
-19.4847 kcal/mol |
3.10673 kcal/mol |
9.1996 kcal/mol |
170 194@LB@ | |@LB@5'-GCU...GAGUU U UUA AGCUG...AAG-3'@LB@ GC AUUUAA CGUUACGCCGG@LB@ || |:|||| ||||||:||:|@LB@ CG UGAAUU GCAAUGUGGUC@LB@3'-UUU...UUCUU UUUUAA CUUUA...CAA-5'@LB@ | |@LB@ 41 15@LB@@LB@@LB@Energy -7.18 kcal/mol@LB@Hybridization Energy -19.4847 kcal/mol@LB@Unfolding Energy - mRNA 3.10673 kcal/mol@LB@Unfolding Energy - sRNA 9.1996 kcal/mol@LB@@LB@Position - mRNA 171 -- 193@LB@Position - sRNA 16 -- 40@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 16 -- 22@LB@ |
171 |
0.01957 |
0.3668 |
b2498 |
upp |
-5.84 |
0.210430 |
244 -- 265 |
42 -- 61 |
uracil phosphoribosyltransferase |
|
_____________243____________________266\n_____________|______________________|\n5'-GGC...CAAGC_______GA___G_________UAUCA...CCG-3'\n______________UGGGACU__UGC_UGAGCAAGA\n______________||::|||__|||_|:|||||||\n______________ACUUUGA__ACG_AUUCGUUCU\n3'-UUU...GCCCU____________A_________UCGUG...CAA-5'\n_____________|______________________|\n_____________62_____________________41\n |
259 -- 265 |
42 -- 48 |
-21.1169 kcal/mol |
8.03919 kcal/mol |
7.23689 kcal/mol |
243 266@LB@ | |@LB@5'-GGC...CAAGC GA G UAUCA...CCG-3'@LB@ UGGGACU UGC UGAGCAAGA@LB@ ||::||| ||| |:|||||||@LB@ ACUUUGA ACG AUUCGUUCU@LB@3'-UUU...GCCCU A UCGUG...CAA-5'@LB@ | |@LB@ 62 41@LB@@LB@@LB@Energy -5.84 kcal/mol@LB@Hybridization Energy -21.1169 kcal/mol@LB@Unfolding Energy - mRNA 8.03919 kcal/mol@LB@Unfolding Energy - sRNA 7.23689 kcal/mol@LB@@LB@Position - mRNA 244 -- 265@LB@Position - sRNA 42 -- 61@LB@Position Seed - mRNA 259 -- 265@LB@Position Seed - sRNA 42 -- 48@LB@ |
55 |
0.002761 |
0.1597 |
b0238 |
gpt |
-5.76 |
0.219641 |
15 -- 42 |
30 -- 59 |
xanthine phosphoribosyltransferase; xanthine-guanine phosphoribosyltransferase |
|
_____________14_____________________________43\n_____________|______________________________|\n5'-AUG...ACACA____AG____________UAUG________UACCA...UUG-3'\n______________AGAC__GCUU__GCGAGA____UUUGAGAA\n______________|:||__||||__||:|||____:||:|:||\n______________UUUG__CGAA__CGUUCU____GAAUUUUU\n3'-UUU...CCUAC____AA____UU______UCGU________UAAGC...CAA-5'\n_____________|______________________________|\n_____________60_____________________________29\n |
36 -- 42 |
30 -- 36 |
-17.3334 kcal/mol |
5.3037 kcal/mol |
6.27042 kcal/mol |
14 43@LB@ | |@LB@5'-AUG...ACACA AG UAUG UACCA...UUG-3'@LB@ AGAC GCUU GCGAGA UUUGAGAA@LB@ |:|| |||| ||:||| :||:|:||@LB@ UUUG CGAA CGUUCU GAAUUUUU@LB@3'-UUU...CCUAC AA UU UCGU UAAGC...CAA-5'@LB@ | |@LB@ 60 29@LB@@LB@@LB@Energy -5.76 kcal/mol@LB@Hybridization Energy -17.3334 kcal/mol@LB@Unfolding Energy - mRNA 5.3037 kcal/mol@LB@Unfolding Energy - sRNA 6.27042 kcal/mol@LB@@LB@Position - mRNA 15 -- 42@LB@Position - sRNA 30 -- 59@LB@Position Seed - mRNA 36 -- 42@LB@Position Seed - sRNA 30 -- 36@LB@ |