89 |
0.006302 |
0.2266 |
b3208 |
mtgA |
-4.90 |
0.336213 |
28 -- 47 |
28 -- 47 |
biosynthetic peptidoglycan transglycosylase |
|
_____________27____________________48\n_____________|_____________________|\n5'-UUG...AUACC____________GG_______GGGCG...UGU-3'\n______________GC_AGAAGUGCU__AAGAGAU\n______________||_|||||::||__||:|:||\n______________CG_UCUUCGUGA__UUUUUUA\n3'-UUU...GAAUU__U_________A________AGCAA...CAA-5'\n_____________|_____________________|\n_____________48____________________27\n |
32 -- 38 |
36 -- 42 |
-15.6239 kcal/mol |
4.50128 kcal/mol |
6.22212 kcal/mol |
27 48@LB@ | |@LB@5'-UUG...AUACC GG GGGCG...UGU-3'@LB@ GC AGAAGUGCU AAGAGAU@LB@ || |||||::|| ||:|:||@LB@ CG UCUUCGUGA UUUUUUA@LB@3'-UUU...GAAUU U A AGCAA...CAA-5'@LB@ | |@LB@ 48 27@LB@@LB@@LB@Energy -4.90 kcal/mol@LB@Hybridization Energy -15.6239 kcal/mol@LB@Unfolding Energy - mRNA 4.50128 kcal/mol@LB@Unfolding Energy - sRNA 6.22212 kcal/mol@LB@@LB@Position - mRNA 28 -- 47@LB@Position - sRNA 28 -- 47@LB@Position Seed - mRNA 32 -- 38@LB@Position Seed - sRNA 36 -- 42@LB@ |
192 |
0.02295 |
0.3851 |
b1282 |
yciH |
-4.88 |
0.338940 |
8 -- 32 |
15 -- 33 |
initiation factor function partial mimic SUI1 family |
|
_____________7_________________________33\n_____________|_________________________|\n____5'-UUCGGUC________AAACUG___________CAUUC...UGC-3'\n______________AGGAGUUC______GUUACGCCGGG\n______________|::|:|||______|||||:||:||\n______________UUUUUAAG______CAAUGUGGUCC\n3'-UUU...UGAAU_________________________UUUAG...CAA-5'\n_____________|_________________________|\n_____________34________________________14\n |
9 -- 15 |
26 -- 32 |
-19.9664 kcal/mol |
6.44674 kcal/mol |
8.63649 kcal/mol |
7 33@LB@ | |@LB@ 5'-UUCGGUC AAACUG CAUUC...UGC-3'@LB@ AGGAGUUC GUUACGCCGGG@LB@ |::|:||| |||||:||:||@LB@ UUUUUAAG CAAUGUGGUCC@LB@3'-UUU...UGAAU UUUAG...CAA-5'@LB@ | |@LB@ 34 14@LB@@LB@@LB@Energy -4.88 kcal/mol@LB@Hybridization Energy -19.9664 kcal/mol@LB@Unfolding Energy - mRNA 6.44674 kcal/mol@LB@Unfolding Energy - sRNA 8.63649 kcal/mol@LB@@LB@Position - mRNA 8 -- 32@LB@Position - sRNA 15 -- 33@LB@Position Seed - mRNA 9 -- 15@LB@Position Seed - sRNA 26 -- 32@LB@ |
199 |
0.02405 |
0.3893 |
b2412 |
zipA |
-4.86 |
0.342002 |
121 -- 136 |
25 -- 40 |
FtsZ stabilizer |
|
_____________120______________137\n_____________|________________|\n5'-CAG...CACUU__________UAA___GCAAA...CUU-3'\n______________GCACUUGAGG___UCG\n______________||||||:|::___|||\n______________CGUGAAUUUU___AGC\n3'-UUU...UUCUU__________UUA___AAUGU...CAA-5'\n_____________|________________|\n_____________41_______________24\n |
124 -- 130 |
31 -- 37 |
-13.2366 kcal/mol |
6.7246 kcal/mol |
1.64821 kcal/mol |
120 137@LB@ | |@LB@5'-CAG...CACUU UAA GCAAA...CUU-3'@LB@ GCACUUGAGG UCG@LB@ ||||||:|:: |||@LB@ CGUGAAUUUU AGC@LB@3'-UUU...UUCUU UUA AAUGU...CAA-5'@LB@ | |@LB@ 41 24@LB@@LB@@LB@Energy -4.86 kcal/mol@LB@Hybridization Energy -13.2366 kcal/mol@LB@Unfolding Energy - mRNA 6.7246 kcal/mol@LB@Unfolding Energy - sRNA 1.64821 kcal/mol@LB@@LB@Position - mRNA 121 -- 136@LB@Position - sRNA 25 -- 40@LB@Position Seed - mRNA 124 -- 130@LB@Position Seed - sRNA 31 -- 37@LB@ |
133 |
0.0127 |
0.3077 |
b2452 |
eutH |
-4.80 |
0.352106 |
186 -- 194 |
38 -- 46 |
ethanolamine transporter |
|
_____________185_______195\n_____________|_________|\n5'-UUG...ACUAA_________AAGGC...UCC-3'\n______________CAGGGAGUA\n______________||:|:||:|\n______________GUUCUUCGU\n3'-UUU...AAUUC_________GAAUU...CAA-5'\n_____________|_________|\n_____________47________37\n |
188 -- 194 |
38 -- 44 |
-8.62764 kcal/mol |
1.2009 kcal/mol |
2.62609 kcal/mol |
185 195@LB@ | |@LB@5'-UUG...ACUAA AAGGC...UCC-3'@LB@ CAGGGAGUA@LB@ ||:|:||:|@LB@ GUUCUUCGU@LB@3'-UUU...AAUUC GAAUU...CAA-5'@LB@ | |@LB@ 47 37@LB@@LB@@LB@Energy -4.80 kcal/mol@LB@Hybridization Energy -8.62764 kcal/mol@LB@Unfolding Energy - mRNA 1.2009 kcal/mol@LB@Unfolding Energy - sRNA 2.62609 kcal/mol@LB@@LB@Position - mRNA 186 -- 194@LB@Position - sRNA 38 -- 46@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 38 -- 44@LB@ |
155 |
0.01672 |
0.3455 |
b1686 |
menI |
-4.77 |
0.356790 |
227 -- 235 |
36 -- 44 |
1 4-dihydroxy-2-naphthoyl-CoA hydrolase |
|
_____________226_______236\n_____________|_________|\n5'-GGC...ACCCU_________GAAUG...AUG-3'\n______________GGAAGCACU\n______________:||||||||\n______________UCUUCGUGA\n3'-UUU...UUCGU_________AUUUU...CAA-5'\n_____________|_________|\n_____________45________35\n |
229 -- 235 |
36 -- 42 |
-13.4239 kcal/mol |
4.1512 kcal/mol |
4.5009 kcal/mol |
226 236@LB@ | |@LB@5'-GGC...ACCCU GAAUG...AUG-3'@LB@ GGAAGCACU@LB@ :||||||||@LB@ UCUUCGUGA@LB@3'-UUU...UUCGU AUUUU...CAA-5'@LB@ | |@LB@ 45 35@LB@@LB@@LB@Energy -4.77 kcal/mol@LB@Hybridization Energy -13.4239 kcal/mol@LB@Unfolding Energy - mRNA 4.1512 kcal/mol@LB@Unfolding Energy - sRNA 4.5009 kcal/mol@LB@@LB@Position - mRNA 227 -- 235@LB@Position - sRNA 36 -- 44@LB@Position Seed - mRNA 229 -- 235@LB@Position Seed - sRNA 36 -- 42@LB@ |
180 |
0.02111 |
0.3768 |
b2753 |
iap |
-4.77 |
0.357003 |
164 -- 179 |
25 -- 40 |
aminopeptidase in alkaline phosphatase isozyme conversion |
|
_____________163______________180\n_____________|________________|\n5'-UAG...CUAUG___G_A__________CAUGG...CUA-3'\n______________GCG_U_AAAAAAUUUG\n______________||:_|_||||||||:|\n______________CGU_A_UUUUUUAAGC\n3'-UUU...UUCUU___G_A__________AAUGU...CAA-5'\n_____________|________________|\n_____________41_______________24\n |
170 -- 176 |
28 -- 34 |
-8.71545 kcal/mol |
2.29678 kcal/mol |
1.64821 kcal/mol |
163 180@LB@ | |@LB@5'-UAG...CUAUG G A CAUGG...CUA-3'@LB@ GCG U AAAAAAUUUG@LB@ ||: | ||||||||:|@LB@ CGU A UUUUUUAAGC@LB@3'-UUU...UUCUU G A AAUGU...CAA-5'@LB@ | |@LB@ 41 24@LB@@LB@@LB@Energy -4.77 kcal/mol@LB@Hybridization Energy -8.71545 kcal/mol@LB@Unfolding Energy - mRNA 2.29678 kcal/mol@LB@Unfolding Energy - sRNA 1.64821 kcal/mol@LB@@LB@Position - mRNA 164 -- 179@LB@Position - sRNA 25 -- 40@LB@Position Seed - mRNA 170 -- 176@LB@Position Seed - sRNA 28 -- 34@LB@ |
147 |
0.01475 |
0.3231 |
b0084 |
ftsI |
-4.75 |
0.360226 |
157 -- 172 |
24 -- 39 |
transpeptidase involved in septal peptidoglycan synthesis; penicillin-binding protein 3 |
|
_____________156_______________173\n_____________|_________________|\n5'-GUU...UCCGU___A________A____AGUGC...UGG-3'\n______________CAC__AGAAAAU_UCGU\n______________|||__|:|||||_||||\n______________GUG__UUUUUUA_AGCA\n3'-UUU...UCUUC___AA____________AUGUG...CAA-5'\n_____________|_________________|\n_____________40________________23\n |
161 -- 167 |
28 -- 34 |
-7.76704 kcal/mol |
1.36905 kcal/mol |
1.64726 kcal/mol |
156 173@LB@ | |@LB@5'-GUU...UCCGU A A AGUGC...UGG-3'@LB@ CAC AGAAAAU UCGU@LB@ ||| |:||||| ||||@LB@ GUG UUUUUUA AGCA@LB@3'-UUU...UCUUC AA AUGUG...CAA-5'@LB@ | |@LB@ 40 23@LB@@LB@@LB@Energy -4.75 kcal/mol@LB@Hybridization Energy -7.76704 kcal/mol@LB@Unfolding Energy - mRNA 1.36905 kcal/mol@LB@Unfolding Energy - sRNA 1.64726 kcal/mol@LB@@LB@Position - mRNA 157 -- 172@LB@Position - sRNA 24 -- 39@LB@Position Seed - mRNA 161 -- 167@LB@Position Seed - sRNA 28 -- 34@LB@ |
104 |
0.008606 |
0.2665 |
b0956 |
matP |
-4.56 |
0.392859 |
215 -- 228 |
25 -- 38 |
Ter macrodomain organizer matS-binding protein |
|
_____________214____________229\n_____________|______________|\n5'-UUU...CAACA_________UC___AAAGC...AAG-3'\n______________ACUUGAAAA__UUG\n______________||||:||||__|:|\n______________UGAAUUUUU__AGC\n3'-UUU...CUUCG_________UA___AAUGU...CAA-5'\n_____________|______________|\n_____________39_____________24\n |
216 -- 222 |
31 -- 37 |
-8.38693 kcal/mol |
2.39574 kcal/mol |
1.4343 kcal/mol |
214 229@LB@ | |@LB@5'-UUU...CAACA UC AAAGC...AAG-3'@LB@ ACUUGAAAA UUG@LB@ ||||:|||| |:|@LB@ UGAAUUUUU AGC@LB@3'-UUU...CUUCG UA AAUGU...CAA-5'@LB@ | |@LB@ 39 24@LB@@LB@@LB@Energy -4.56 kcal/mol@LB@Hybridization Energy -8.38693 kcal/mol@LB@Unfolding Energy - mRNA 2.39574 kcal/mol@LB@Unfolding Energy - sRNA 1.4343 kcal/mol@LB@@LB@Position - mRNA 215 -- 228@LB@Position - sRNA 25 -- 38@LB@Position Seed - mRNA 216 -- 222@LB@Position Seed - sRNA 31 -- 37@LB@ |
154 |
0.01606 |
0.3359 |
b2587 |
kgtP |
-4.55 |
0.394910 |
6 -- 12 |
52 -- 58 |
alpha-ketoglutarate transporter |
|
_____________5_______13\n_____________|_______|\n______5'-UCCCC_______CCACU...UCG-3'\n______________AACUUGC\n______________|||||||\n______________UUGAACG\n3'-UUU...CUACU_______AAUUC...CAA-5'\n_____________|_______|\n_____________59______51\n |
6 -- 12 |
52 -- 58 |
-7.82918 kcal/mol |
0.15004 kcal/mol |
3.13411 kcal/mol |
5 13@LB@ | |@LB@ 5'-UCCCC CCACU...UCG-3'@LB@ AACUUGC@LB@ |||||||@LB@ UUGAACG@LB@3'-UUU...CUACU AAUUC...CAA-5'@LB@ | |@LB@ 59 51@LB@@LB@@LB@Energy -4.55 kcal/mol@LB@Hybridization Energy -7.82918 kcal/mol@LB@Unfolding Energy - mRNA 0.15004 kcal/mol@LB@Unfolding Energy - sRNA 3.13411 kcal/mol@LB@@LB@Position - mRNA 6 -- 12@LB@Position - sRNA 52 -- 58@LB@Position Seed - mRNA 6 -- 12@LB@Position Seed - sRNA 52 -- 58@LB@ |
37 |
0.00139 |
0.121 |
b2222 |
atoA |
-4.53 |
0.397320 |
265 -- 276 |
25 -- 38 |
acetyl-CoA:acetoacetyl-CoA transferase beta subunit |
|
_____________264____________277\n_____________|______________|\n5'-CGC...CGUUA______________GUUUA...AUU-3'\n______________ACUUAGGGA__UCG\n______________|||||:::|__|||\n______________UGAAUUUUU__AGC\n3'-UUU...CUUCG_________UA___AAUGU...CAA-5'\n_____________|______________|\n_____________39_____________24\n |
266 -- 272 |
31 -- 37 |
-7.73128 kcal/mol |
1.76584 kcal/mol |
1.4343 kcal/mol |
264 277@LB@ | |@LB@5'-CGC...CGUUA GUUUA...AUU-3'@LB@ ACUUAGGGA UCG@LB@ |||||:::| |||@LB@ UGAAUUUUU AGC@LB@3'-UUU...CUUCG UA AAUGU...CAA-5'@LB@ | |@LB@ 39 24@LB@@LB@@LB@Energy -4.53 kcal/mol@LB@Hybridization Energy -7.73128 kcal/mol@LB@Unfolding Energy - mRNA 1.76584 kcal/mol@LB@Unfolding Energy - sRNA 1.4343 kcal/mol@LB@@LB@Position - mRNA 265 -- 276@LB@Position - sRNA 25 -- 38@LB@Position Seed - mRNA 266 -- 272@LB@Position Seed - sRNA 31 -- 37@LB@ |