66 |
0.001146 |
0.05856 |
b1657 |
ydhP |
-3.95 |
0.782289 |
131 -- 139 |
49 -- 57 |
putative MFS transporter inner membrane protein |
|
_____________130_______140\n_____________|_________|\n5'-UCG...UUUUU_G_______UGUCA...GCG-3'\n______________U_UGAUUGC\n______________|_:||||:|\n______________A_GCUAAUG\n3'-AUU...GGUUU_G_______CACUU...AUG-5'\n_____________|_________|\n_____________58________48\n |
133 -- 139 |
49 -- 55 |
-6.30818 kcal/mol |
2.04371 kcal/mol |
0.318327 kcal/mol |
130 140@LB@ | |@LB@5'-UCG...UUUUU G UGUCA...GCG-3'@LB@ U UGAUUGC@LB@ | :||||:|@LB@ A GCUAAUG@LB@3'-AUU...GGUUU G CACUU...AUG-5'@LB@ | |@LB@ 58 48@LB@@LB@@LB@Energy -3.95 kcal/mol@LB@Hybridization Energy -6.30818 kcal/mol@LB@Unfolding Energy - mRNA 2.04371 kcal/mol@LB@Unfolding Energy - sRNA 0.318327 kcal/mol@LB@@LB@Position - mRNA 131 -- 139@LB@Position - sRNA 49 -- 57@LB@Position Seed - mRNA 133 -- 139@LB@Position Seed - sRNA 49 -- 55@LB@ |
123 |
0.004171 |
0.1178 |
b2989 |
yghU |
-8.31 |
0.130595 |
46 -- 54 |
49 -- 57 |
putative S-transferase |
|
_____________45________55\n_____________|_________|\n5'-UUA...UGUGC_________CUGCU...CGC-3'\n______________UCUGAUUAC\n______________||:||||||\n______________AGGCUAAUG\n3'-AUU...GGUUU_________CACUU...AUG-5'\n_____________|_________|\n_____________58________48\n |
48 -- 54 |
49 -- 55 |
-9.38135 kcal/mol |
0.766517 kcal/mol |
0.318327 kcal/mol |
45 55@LB@ | |@LB@5'-UUA...UGUGC CUGCU...CGC-3'@LB@ UCUGAUUAC@LB@ ||:||||||@LB@ AGGCUAAUG@LB@3'-AUU...GGUUU CACUU...AUG-5'@LB@ | |@LB@ 58 48@LB@@LB@@LB@Energy -8.31 kcal/mol@LB@Hybridization Energy -9.38135 kcal/mol@LB@Unfolding Energy - mRNA 0.766517 kcal/mol@LB@Unfolding Energy - sRNA 0.318327 kcal/mol@LB@@LB@Position - mRNA 46 -- 54@LB@Position - sRNA 49 -- 57@LB@Position Seed - mRNA 48 -- 54@LB@Position Seed - sRNA 49 -- 55@LB@ |
168 |
0.006917 |
0.1448 |
b3070 |
yqjH |
-8.25 |
0.134865 |
172 -- 181 |
49 -- 58 |
putative siderophore interacting protein |
|
_____________171________182\n_____________|__________|\n5'-ACU...GAUAU__________CAUCA...AGC-3'\n______________AUCUGAUUAC\n______________|||:||||||\n______________UAGGCUAAUG\n3'-AUU...CGGUU__________CACUU...AUG-5'\n_____________|__________|\n_____________59_________48\n |
175 -- 181 |
49 -- 55 |
-10.8722 kcal/mol |
2.31397 kcal/mol |
0.318367 kcal/mol |
171 182@LB@ | |@LB@5'-ACU...GAUAU CAUCA...AGC-3'@LB@ AUCUGAUUAC@LB@ |||:||||||@LB@ UAGGCUAAUG@LB@3'-AUU...CGGUU CACUU...AUG-5'@LB@ | |@LB@ 59 48@LB@@LB@@LB@Energy -8.25 kcal/mol@LB@Hybridization Energy -10.8722 kcal/mol@LB@Unfolding Energy - mRNA 2.31397 kcal/mol@LB@Unfolding Energy - sRNA 0.318367 kcal/mol@LB@@LB@Position - mRNA 172 -- 181@LB@Position - sRNA 49 -- 58@LB@Position Seed - mRNA 175 -- 181@LB@Position Seed - sRNA 49 -- 55@LB@ |
183 |
0.007903 |
0.1519 |
b2725 |
hycA |
-8.51 |
0.115738 |
229 -- 236 |
49 -- 56 |
regulator of the transcriptional regulator FhlA |
|
_____________228______237\n_____________|________|\n5'-UUA...GAAAG________AUCGC...AGG-3'\n______________CCGAUUAC\n______________||||||||\n______________GGCUAAUG\n3'-AUU...GUUUA________CACUU...AUG-5'\n_____________|________|\n_____________57_______48\n |
230 -- 236 |
49 -- 55 |
-10.9203 kcal/mol |
2.09518 kcal/mol |
0.317884 kcal/mol |
228 237@LB@ | |@LB@5'-UUA...GAAAG AUCGC...AGG-3'@LB@ CCGAUUAC@LB@ ||||||||@LB@ GGCUAAUG@LB@3'-AUU...GUUUA CACUU...AUG-5'@LB@ | |@LB@ 57 48@LB@@LB@@LB@Energy -8.51 kcal/mol@LB@Hybridization Energy -10.9203 kcal/mol@LB@Unfolding Energy - mRNA 2.09518 kcal/mol@LB@Unfolding Energy - sRNA 0.317884 kcal/mol@LB@@LB@Position - mRNA 229 -- 236@LB@Position - sRNA 49 -- 56@LB@Position Seed - mRNA 230 -- 236@LB@Position Seed - sRNA 49 -- 55@LB@ |
153 |
0.006198 |
0.1406 |
b3459 |
panM |
-8.50 |
0.116540 |
144 -- 151 |
50 -- 57 |
PanD autocleavage accelerator panothenate synthesis |
|
_____________143______152\n_____________|________|\n5'-AAA...AAGCC________AAUUA...UUG-3'\n______________UCCGAUUA\n______________||||||||\n______________AGGCUAAU\n3'-AUU...GGUUU________GCACU...AUG-5'\n_____________|________|\n_____________58_______49\n |
145 -- 151 |
50 -- 56 |
-10.246 kcal/mol |
1.44461 kcal/mol |
0.317388 kcal/mol |
143 152@LB@ | |@LB@5'-AAA...AAGCC AAUUA...UUG-3'@LB@ UCCGAUUA@LB@ ||||||||@LB@ AGGCUAAU@LB@3'-AUU...GGUUU GCACU...AUG-5'@LB@ | |@LB@ 58 49@LB@@LB@@LB@Energy -8.50 kcal/mol@LB@Hybridization Energy -10.246 kcal/mol@LB@Unfolding Energy - mRNA 1.44461 kcal/mol@LB@Unfolding Energy - sRNA 0.317388 kcal/mol@LB@@LB@Position - mRNA 144 -- 151@LB@Position - sRNA 50 -- 57@LB@Position Seed - mRNA 145 -- 151@LB@Position Seed - sRNA 50 -- 56@LB@ |
73 |
0.001217 |
0.05856 |
b1702 |
ppsA |
-8.47 |
0.118779 |
124 -- 132 |
50 -- 58 |
phosphoenolpyruvate synthase |
|
_____________123_______133\n_____________|_________|\n5'-UAU...UUUUC_________AAUAU...AAA-3'\n______________AUCCGGUUA\n______________|||||:|||\n______________UAGGCUAAU\n3'-AUU...CGGUU_________GCACU...AUG-5'\n_____________|_________|\n_____________59________49\n |
126 -- 132 |
50 -- 56 |
-10.3571 kcal/mol |
1.58803 kcal/mol |
0.317553 kcal/mol |
123 133@LB@ | |@LB@5'-UAU...UUUUC AAUAU...AAA-3'@LB@ AUCCGGUUA@LB@ |||||:|||@LB@ UAGGCUAAU@LB@3'-AUU...CGGUU GCACU...AUG-5'@LB@ | |@LB@ 59 49@LB@@LB@@LB@Energy -8.47 kcal/mol@LB@Hybridization Energy -10.3571 kcal/mol@LB@Unfolding Energy - mRNA 1.58803 kcal/mol@LB@Unfolding Energy - sRNA 0.317553 kcal/mol@LB@@LB@Position - mRNA 124 -- 132@LB@Position - sRNA 50 -- 58@LB@Position Seed - mRNA 126 -- 132@LB@Position Seed - sRNA 50 -- 56@LB@ |
174 |
0.007262 |
0.1466 |
b0473 |
htpG |
-8.02 |
0.153160 |
10 -- 17 |
50 -- 57 |
protein refolding molecular co-chaperone Hsp90 Hsp70-dependent; heat-shock protein; ATPase |
|
_____________9________18\n_____________|________|\n5'-UCA...GGCGU________GCGGC...GUG-3'\n______________UCCGGUUG\n______________||||:||:\n______________AGGCUAAU\n3'-AUU...GGUUU________GCACU...AUG-5'\n_____________|________|\n_____________58_______49\n |
11 -- 17 |
50 -- 56 |
-9.07782 kcal/mol |
0.753256 kcal/mol |
0.317388 kcal/mol |
9 18@LB@ | |@LB@5'-UCA...GGCGU GCGGC...GUG-3'@LB@ UCCGGUUG@LB@ ||||:||:@LB@ AGGCUAAU@LB@3'-AUU...GGUUU GCACU...AUG-5'@LB@ | |@LB@ 58 49@LB@@LB@@LB@Energy -8.02 kcal/mol@LB@Hybridization Energy -9.07782 kcal/mol@LB@Unfolding Energy - mRNA 0.753256 kcal/mol@LB@Unfolding Energy - sRNA 0.317388 kcal/mol@LB@@LB@Position - mRNA 10 -- 17@LB@Position - sRNA 50 -- 57@LB@Position Seed - mRNA 11 -- 17@LB@Position Seed - sRNA 50 -- 56@LB@ |
143 |
0.005218 |
0.1284 |
b1922 |
fliA |
-8.86 |
0.094137 |
133 -- 141 |
50 -- 58 |
RNA polymerase sigma 28 (sigma F) factor |
|
_____________132_______142\n_____________|_________|\n5'-AGG...UAAUC_________AAAAC...UUC-3'\n______________GUCCGAUUA\n______________:||||||||\n______________UAGGCUAAU\n3'-AUU...CGGUU_________GCACU...AUG-5'\n_____________|_________|\n_____________59________49\n |
135 -- 141 |
50 -- 56 |
-11.3914 kcal/mol |
2.23267 kcal/mol |
0.317553 kcal/mol |
132 142@LB@ | |@LB@5'-AGG...UAAUC AAAAC...UUC-3'@LB@ GUCCGAUUA@LB@ :||||||||@LB@ UAGGCUAAU@LB@3'-AUU...CGGUU GCACU...AUG-5'@LB@ | |@LB@ 59 49@LB@@LB@@LB@Energy -8.86 kcal/mol@LB@Hybridization Energy -11.3914 kcal/mol@LB@Unfolding Energy - mRNA 2.23267 kcal/mol@LB@Unfolding Energy - sRNA 0.317553 kcal/mol@LB@@LB@Position - mRNA 133 -- 141@LB@Position - sRNA 50 -- 58@LB@Position Seed - mRNA 135 -- 141@LB@Position Seed - sRNA 50 -- 56@LB@ |
148 |
0.00596 |
0.1406 |
b3426 |
glpD |
-7.81 |
0.172743 |
213 -- 222 |
50 -- 59 |
sn-glycerol-3-phosphate dehydrogenase aerobic FAD/NAD(P)-binding |
|
_____________212________223\n_____________|__________|\n5'-AAC...CCAAA__________UGAUA...AGG-3'\n______________GAUCUGAUUG\n______________:|||:||||:\n______________UUAGGCUAAU\n3'-AUU...UCGGU__________GCACU...AUG-5'\n_____________|__________|\n_____________60_________49\n |
216 -- 222 |
50 -- 56 |
-9.79708 kcal/mol |
1.6903 kcal/mol |
0.31771 kcal/mol |
212 223@LB@ | |@LB@5'-AAC...CCAAA UGAUA...AGG-3'@LB@ GAUCUGAUUG@LB@ :|||:||||:@LB@ UUAGGCUAAU@LB@3'-AUU...UCGGU GCACU...AUG-5'@LB@ | |@LB@ 60 49@LB@@LB@@LB@Energy -7.81 kcal/mol@LB@Hybridization Energy -9.79708 kcal/mol@LB@Unfolding Energy - mRNA 1.6903 kcal/mol@LB@Unfolding Energy - sRNA 0.31771 kcal/mol@LB@@LB@Position - mRNA 213 -- 222@LB@Position - sRNA 50 -- 59@LB@Position Seed - mRNA 216 -- 222@LB@Position Seed - sRNA 50 -- 56@LB@ |
194 |
0.008663 |
0.1558 |
b0213 |
yafS |
-5.39 |
0.521143 |
17 -- 34 |
51 -- 73 |
putative S-adenosyl-L-methionine-dependent methyltransferase |
|
_____________16______________________35\n_____________|_______________________|\n5'-UGG...GGUGA_______________________GCCAG...UCA-3'\n______________GAAAUAU__GGCC___UCCGGUU\n______________:||||||__:|||___||||:||\n______________UUUUAUA__UCGG___AGGCUAA\n3'-AUU...GCCGA_______AG____UUU_______UGCAC...AUG-5'\n_____________|_______________________|\n_____________74______________________50\n |
28 -- 34 |
51 -- 57 |
-15.2768 kcal/mol |
3.69768 kcal/mol |
6.213 kcal/mol |
16 35@LB@ | |@LB@5'-UGG...GGUGA GCCAG...UCA-3'@LB@ GAAAUAU GGCC UCCGGUU@LB@ :|||||| :||| ||||:||@LB@ UUUUAUA UCGG AGGCUAA@LB@3'-AUU...GCCGA AG UUU UGCAC...AUG-5'@LB@ | |@LB@ 74 50@LB@@LB@@LB@Energy -5.39 kcal/mol@LB@Hybridization Energy -15.2768 kcal/mol@LB@Unfolding Energy - mRNA 3.69768 kcal/mol@LB@Unfolding Energy - sRNA 6.213 kcal/mol@LB@@LB@Position - mRNA 17 -- 34@LB@Position - sRNA 51 -- 73@LB@Position Seed - mRNA 28 -- 34@LB@Position Seed - sRNA 51 -- 57@LB@ |