161 |
0.03295 |
0.6177 |
b1630 |
rsxD |
-5.86 |
0.265655 |
34 -- 42 |
49 -- 57 |
SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex |
|
_____________33________43\n_____________|_________|\n5'-AGC...AGCUG_________CGGCU...CAG-3'\n______________CCGUCGAAG\n______________|||||:|||\n______________GGCAGUUUC\n3'-UUU...AACCG_________UCCUU...ACA-5'\n_____________|_________|\n_____________58________48\n |
36 -- 42 |
49 -- 55 |
-12.0908 kcal/mol |
3.50131 kcal/mol |
2.72876 kcal/mol |
33 43@LB@ | |@LB@5'-AGC...AGCUG CGGCU...CAG-3'@LB@ CCGUCGAAG@LB@ |||||:|||@LB@ GGCAGUUUC@LB@3'-UUU...AACCG UCCUU...ACA-5'@LB@ | |@LB@ 58 48@LB@@LB@@LB@Energy -5.86 kcal/mol@LB@Hybridization Energy -12.0908 kcal/mol@LB@Unfolding Energy - mRNA 3.50131 kcal/mol@LB@Unfolding Energy - sRNA 2.72876 kcal/mol@LB@@LB@Position - mRNA 34 -- 42@LB@Position - sRNA 49 -- 57@LB@Position Seed - mRNA 36 -- 42@LB@Position Seed - sRNA 49 -- 55@LB@ |
162 |
0.03332 |
0.6177 |
b3304 |
rplR |
-8.58 |
0.079933 |
170 -- 177 |
46 -- 53 |
50S ribosomal subunit protein L18 |
|
_____________169______178\n_____________|________|\n5'-AUC...CGUAC________CUAAG...GUC-3'\n______________CAAAGAGG\n______________||||||||\n______________GUUUCUCC\n3'-UUU...GGGCA________UUAAA...ACA-5'\n_____________|________|\n_____________54_______45\n |
171 -- 177 |
46 -- 52 |
-11.2869 kcal/mol |
1.80103 kcal/mol |
0.910679 kcal/mol |
169 178@LB@ | |@LB@5'-AUC...CGUAC CUAAG...GUC-3'@LB@ CAAAGAGG@LB@ ||||||||@LB@ GUUUCUCC@LB@3'-UUU...GGGCA UUAAA...ACA-5'@LB@ | |@LB@ 54 45@LB@@LB@@LB@Energy -8.58 kcal/mol@LB@Hybridization Energy -11.2869 kcal/mol@LB@Unfolding Energy - mRNA 1.80103 kcal/mol@LB@Unfolding Energy - sRNA 0.910679 kcal/mol@LB@@LB@Position - mRNA 170 -- 177@LB@Position - sRNA 46 -- 53@LB@Position Seed - mRNA 171 -- 177@LB@Position Seed - sRNA 46 -- 52@LB@ |
163 |
0.03345 |
0.6177 |
b1235 |
rssB |
-5.20 |
0.346272 |
186 -- 195 |
44 -- 55 |
PcnB-degradosome interaction factor; response regulator |
|
_____________185__________196\n_____________|____________|\n5'-AAU...AGCCA____________AGAAC...CAA-3'\n______________GUC__AGGGGAG\n______________|||__||:|||:\n______________CAG__UCUCCUU\n3'-UUU...CCGGG___UU_______AAAGU...ACA-5'\n_____________|____________|\n_____________56___________43\n |
189 -- 195 |
44 -- 50 |
-10.1709 kcal/mol |
4.02871 kcal/mol |
0.941432 kcal/mol |
185 196@LB@ | |@LB@5'-AAU...AGCCA AGAAC...CAA-3'@LB@ GUC AGGGGAG@LB@ ||| ||:|||:@LB@ CAG UCUCCUU@LB@3'-UUU...CCGGG UU AAAGU...ACA-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -5.20 kcal/mol@LB@Hybridization Energy -10.1709 kcal/mol@LB@Unfolding Energy - mRNA 4.02871 kcal/mol@LB@Unfolding Energy - sRNA 0.941432 kcal/mol@LB@@LB@Position - mRNA 186 -- 195@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 44 -- 50@LB@ |
164 |
0.03346 |
0.6177 |
b1449 |
curA |
-5.87 |
0.264423 |
114 -- 122 |
45 -- 53 |
curcumin/dihydrocurcumin reductase NADPH-dependent |
|
_____________113_______123\n_____________|_________|\n5'-CGG...UGUUG_________UGUGA...UCG-3'\n______________CAGAGGGGA\n______________||:||:|||\n______________GUUUCUCCU\n3'-UUU...GGGCA_________UAAAG...ACA-5'\n_____________|_________|\n_____________54________44\n |
116 -- 122 |
45 -- 51 |
-11.6619 kcal/mol |
4.87234 kcal/mol |
0.917553 kcal/mol |
113 123@LB@ | |@LB@5'-CGG...UGUUG UGUGA...UCG-3'@LB@ CAGAGGGGA@LB@ ||:||:|||@LB@ GUUUCUCCU@LB@3'-UUU...GGGCA UAAAG...ACA-5'@LB@ | |@LB@ 54 44@LB@@LB@@LB@Energy -5.87 kcal/mol@LB@Hybridization Energy -11.6619 kcal/mol@LB@Unfolding Energy - mRNA 4.87234 kcal/mol@LB@Unfolding Energy - sRNA 0.917553 kcal/mol@LB@@LB@Position - mRNA 114 -- 122@LB@Position - sRNA 45 -- 53@LB@Position Seed - mRNA 116 -- 122@LB@Position Seed - sRNA 45 -- 51@LB@ |
165 |
0.0337 |
0.6177 |
b3983 |
rplK |
-8.80 |
0.071896 |
189 -- 197 |
41 -- 49 |
50S ribosomal subunit protein L11 |
|
_____________188_______198\n_____________|_________|\n5'-ACC...AACUU_________AUAAU...UAA-3'\n______________GAGGAAUUU\n______________|||||||||\n______________CUCCUUAAA\n3'-UUU...AGUUU_________GUAAA...ACA-5'\n_____________|_________|\n_____________50________40\n |
191 -- 197 |
41 -- 47 |
-11.4231 kcal/mol |
1.76644 kcal/mol |
0.852225 kcal/mol |
188 198@LB@ | |@LB@5'-ACC...AACUU AUAAU...UAA-3'@LB@ GAGGAAUUU@LB@ |||||||||@LB@ CUCCUUAAA@LB@3'-UUU...AGUUU GUAAA...ACA-5'@LB@ | |@LB@ 50 40@LB@@LB@@LB@Energy -8.80 kcal/mol@LB@Hybridization Energy -11.4231 kcal/mol@LB@Unfolding Energy - mRNA 1.76644 kcal/mol@LB@Unfolding Energy - sRNA 0.852225 kcal/mol@LB@@LB@Position - mRNA 189 -- 197@LB@Position - sRNA 41 -- 49@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 41 -- 47@LB@ |
166 |
0.03384 |
0.6177 |
b4035 |
malK |
-4.35 |
0.473183 |
186 -- 196 |
44 -- 53 |
maltose ABC transportor ATPase |
|
_____________185_________197\n_____________|___________|\n5'-CGC...UGUUA_______A___GGGCA...UGU-3'\n______________CAAAGGG_GAA\n______________|||||:|_|||\n______________GUUUCUC_CUU\n3'-UUU...GGGCA___________AAAGU...ACA-5'\n_____________|___________|\n_____________54__________43\n |
186 -- 192 |
47 -- 53 |
-9.12531 kcal/mol |
3.84302 kcal/mol |
0.927997 kcal/mol |
185 197@LB@ | |@LB@5'-CGC...UGUUA A GGGCA...UGU-3'@LB@ CAAAGGG GAA@LB@ |||||:| |||@LB@ GUUUCUC CUU@LB@3'-UUU...GGGCA AAAGU...ACA-5'@LB@ | |@LB@ 54 43@LB@@LB@@LB@Energy -4.35 kcal/mol@LB@Hybridization Energy -9.12531 kcal/mol@LB@Unfolding Energy - mRNA 3.84302 kcal/mol@LB@Unfolding Energy - sRNA 0.927997 kcal/mol@LB@@LB@Position - mRNA 186 -- 196@LB@Position - sRNA 44 -- 53@LB@Position Seed - mRNA 186 -- 192@LB@Position Seed - sRNA 47 -- 53@LB@ |
167 |
0.03387 |
0.6177 |
b3980 |
tufB |
-7.70 |
0.119070 |
183 -- 194 |
44 -- 55 |
translation elongation factor EF-Tu 2 |
b3339 |
_____________182__________195\n_____________|____________|\n5'-UCC...UCCGU___UU_______CAAUC...CUA-3'\n______________GUC__AGAGGGA\n______________|||__|||||:|\n______________CAG__UCUCCUU\n3'-UUU...CCGGG___UU_______AAAGU...ACA-5'\n_____________|____________|\n_____________56___________43\n |
188 -- 194 |
44 -- 50 |
-14.3886 kcal/mol |
5.74361 kcal/mol |
0.941432 kcal/mol |
182 195@LB@ | |@LB@5'-UCC...UCCGU UU CAAUC...CUA-3'@LB@ GUC AGAGGGA@LB@ ||| |||||:|@LB@ CAG UCUCCUU@LB@3'-UUU...CCGGG UU AAAGU...ACA-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -7.70 kcal/mol@LB@Hybridization Energy -14.3886 kcal/mol@LB@Unfolding Energy - mRNA 5.74361 kcal/mol@LB@Unfolding Energy - sRNA 0.941432 kcal/mol@LB@@LB@Position - mRNA 183 -- 194@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 44 -- 50@LB@ |
168 |
0.03398 |
0.6177 |
b0321 |
yahG |
-8.56 |
0.080369 |
183 -- 192 |
44 -- 53 |
DUF1116 family protein |
b4572 |
_____________182________193\n_____________|__________|\n5'-AUC...AUCUG__________GAAGC...AAC-3'\n______________CAAAGGGGAG\n______________|||||:|||:\n______________GUUUCUCCUU\n3'-UUU...GGGCA__________AAAGU...ACA-5'\n_____________|__________|\n_____________54_________43\n |
186 -- 192 |
44 -- 50 |
-12.9704 kcal/mol |
3.47901 kcal/mol |
0.927997 kcal/mol |
182 193@LB@ | |@LB@5'-AUC...AUCUG GAAGC...AAC-3'@LB@ CAAAGGGGAG@LB@ |||||:|||:@LB@ GUUUCUCCUU@LB@3'-UUU...GGGCA AAAGU...ACA-5'@LB@ | |@LB@ 54 43@LB@@LB@@LB@Energy -8.56 kcal/mol@LB@Hybridization Energy -12.9704 kcal/mol@LB@Unfolding Energy - mRNA 3.47901 kcal/mol@LB@Unfolding Energy - sRNA 0.927997 kcal/mol@LB@@LB@Position - mRNA 183 -- 192@LB@Position - sRNA 44 -- 53@LB@Position Seed - mRNA 186 -- 192@LB@Position Seed - sRNA 44 -- 50@LB@ |
169 |
0.03425 |
0.6177 |
b0336 |
codB |
-12.15 |
0.014930 |
188 -- 202 |
38 -- 52 |
cytosine transporter |
|
_____________187_____________203\n_____________|_______________|\n5'-CCA...GCAAA_______________GUCGC...UUU-3'\n______________AAGGGGGAAUUUCGU\n______________||:|:||||||||:|\n______________UUUCUCCUUAAAGUA\n3'-UUU...GGCAG_______________AAAAA...ACA-5'\n_____________|_______________|\n_____________53______________37\n |
196 -- 202 |
38 -- 44 |
-18.3448 kcal/mol |
5.13025 kcal/mol |
1.0693 kcal/mol |
187 203@LB@ | |@LB@5'-CCA...GCAAA GUCGC...UUU-3'@LB@ AAGGGGGAAUUUCGU@LB@ ||:|:||||||||:|@LB@ UUUCUCCUUAAAGUA@LB@3'-UUU...GGCAG AAAAA...ACA-5'@LB@ | |@LB@ 53 37@LB@@LB@@LB@Energy -12.15 kcal/mol@LB@Hybridization Energy -18.3448 kcal/mol@LB@Unfolding Energy - mRNA 5.13025 kcal/mol@LB@Unfolding Energy - sRNA 1.0693 kcal/mol@LB@@LB@Position - mRNA 188 -- 202@LB@Position - sRNA 38 -- 52@LB@Position Seed - mRNA 196 -- 202@LB@Position Seed - sRNA 38 -- 44@LB@ |
170 |
0.03452 |
0.6177 |
b0792 |
ybhR |
-7.08 |
0.157577 |
208 -- 236 |
47 -- 69 |
putative ABC transporter permease |
|
_____________207____________________________237\n_____________|______________________________|\n5'-CAG...GUUUC______UA___ACGUUAA____________UUGCA...AGG-3'\n______________AUCGCU__UGG_______UCCG_CAAAGAG\n______________||||||__|||_______:|||_|||||||\n______________UAGCGA__ACC_______GGGC_GUUUCUC\n3'-UUU...GGUUA______UA______________A_______CUUAA...ACA-5'\n_____________|______________________________|\n_____________70_____________________________46\n |
230 -- 236 |
47 -- 53 |
-23.2437 kcal/mol |
4.95079 kcal/mol |
11.2154 kcal/mol |
207 237@LB@ | |@LB@5'-CAG...GUUUC UA ACGUUAA UUGCA...AGG-3'@LB@ AUCGCU UGG UCCG CAAAGAG@LB@ |||||| ||| :||| |||||||@LB@ UAGCGA ACC GGGC GUUUCUC@LB@3'-UUU...GGUUA UA A CUUAA...ACA-5'@LB@ | |@LB@ 70 46@LB@@LB@@LB@Energy -7.08 kcal/mol@LB@Hybridization Energy -23.2437 kcal/mol@LB@Unfolding Energy - mRNA 4.95079 kcal/mol@LB@Unfolding Energy - sRNA 11.2154 kcal/mol@LB@@LB@Position - mRNA 208 -- 236@LB@Position - sRNA 47 -- 69@LB@Position Seed - mRNA 230 -- 236@LB@Position Seed - sRNA 47 -- 53@LB@ |