56 |
0.01109 |
0.5385 |
b0425 |
panE |
-9.95 |
0.107741 |
273 -- 289 |
74 -- 89 |
2-dehydropantoate reductase NADPH-specific |
|
_____________272_______________290\n_____________|_________________|\n5'-AUC...GUCAU________G_GC_____GCGCG...CGC-3'\n______________GAAGUUCA_G__UGGCU\n______________:|||||||_|__|||||\n______________UUUCAAGU_C__ACCGA\n3'-CGC...GGCGU________G_A______AAUCA...AAG-5'\n_____________|_________________|\n_____________90________________73\n |
274 -- 280 |
82 -- 88 |
-18.2046 kcal/mol |
7.73441 kcal/mol |
0.517373 kcal/mol |
272 290@LB@ | |@LB@5'-AUC...GUCAU G GC GCGCG...CGC-3'@LB@ GAAGUUCA G UGGCU@LB@ :||||||| | |||||@LB@ UUUCAAGU C ACCGA@LB@3'-CGC...GGCGU G A AAUCA...AAG-5'@LB@ | |@LB@ 90 73@LB@@LB@@LB@Energy -9.95 kcal/mol@LB@Hybridization Energy -18.2046 kcal/mol@LB@Unfolding Energy - mRNA 7.73441 kcal/mol@LB@Unfolding Energy - sRNA 0.517373 kcal/mol@LB@@LB@Position - mRNA 273 -- 289@LB@Position - sRNA 74 -- 89@LB@Position Seed - mRNA 274 -- 280@LB@Position Seed - sRNA 82 -- 88@LB@ |
48 |
0.009918 |
0.5385 |
b0641 |
lptE |
-9.88 |
0.110832 |
177 -- 184 |
74 -- 81 |
LPS assembly OM complex LptDE lipoprotein component |
|
_____________176______185\n_____________|________|\n5'-ACG...CUGGU________AAGCG...UGA-3'\n______________CGUUGGCU\n______________||||||||\n______________GCAACCGA\n3'-CGC...CAAGU________AAUCA...AAG-5'\n_____________|________|\n_____________82_______73\n |
178 -- 184 |
74 -- 80 |
-13.2047 kcal/mol |
2.99134 kcal/mol |
0.332056 kcal/mol |
176 185@LB@ | |@LB@5'-ACG...CUGGU AAGCG...UGA-3'@LB@ CGUUGGCU@LB@ ||||||||@LB@ GCAACCGA@LB@3'-CGC...CAAGU AAUCA...AAG-5'@LB@ | |@LB@ 82 73@LB@@LB@@LB@Energy -9.88 kcal/mol@LB@Hybridization Energy -13.2047 kcal/mol@LB@Unfolding Energy - mRNA 2.99134 kcal/mol@LB@Unfolding Energy - sRNA 0.332056 kcal/mol@LB@@LB@Position - mRNA 177 -- 184@LB@Position - sRNA 74 -- 81@LB@Position Seed - mRNA 178 -- 184@LB@Position Seed - sRNA 74 -- 80@LB@ |
184 |
0.03259 |
0.5559 |
b0811 |
glnH |
-9.61 |
0.123139 |
215 -- 230 |
74 -- 90 |
glutamine transporter subunit |
|
_____________214________________231\n_____________|__________________|\n5'-AUC...GUAUU_______U__________GCACU...CCG-3'\n______________AAAAGUU_CAC__UGGCU\n______________|||||||_|||__|||||\n______________UUUUCAA_GUG__ACCGA\n3'-CGC...AGGCG___________CA_____AAUCA...AAG-5'\n_____________|__________________|\n_____________91_________________73\n |
215 -- 221 |
84 -- 90 |
-14.2101 kcal/mol |
4.07847 kcal/mol |
0.517587 kcal/mol |
214 231@LB@ | |@LB@5'-AUC...GUAUU U GCACU...CCG-3'@LB@ AAAAGUU CAC UGGCU@LB@ ||||||| ||| |||||@LB@ UUUUCAA GUG ACCGA@LB@3'-CGC...AGGCG CA AAUCA...AAG-5'@LB@ | |@LB@ 91 73@LB@@LB@@LB@Energy -9.61 kcal/mol@LB@Hybridization Energy -14.2101 kcal/mol@LB@Unfolding Energy - mRNA 4.07847 kcal/mol@LB@Unfolding Energy - sRNA 0.517587 kcal/mol@LB@@LB@Position - mRNA 215 -- 230@LB@Position - sRNA 74 -- 90@LB@Position Seed - mRNA 215 -- 221@LB@Position Seed - sRNA 84 -- 90@LB@ |
96 |
0.0164 |
0.5385 |
b2670 |
alaE |
-9.59 |
0.124335 |
245 -- 257 |
74 -- 86 |
alanine exporter alanine-inducible stress-responsive |
|
_____________244___________258\n_____________|_____________|\n5'-CGG...GAUAC_______A_____GUUUA...UCU-3'\n______________GUUCGCG_UGGUU\n______________||||:||_|||:|\n______________CAAGUGC_ACCGA\n3'-CGC...GUUUU_______A_____AAUCA...AAG-5'\n_____________|_____________|\n_____________87____________73\n |
245 -- 251 |
80 -- 86 |
-15.4589 kcal/mol |
5.35611 kcal/mol |
0.513318 kcal/mol |
244 258@LB@ | |@LB@5'-CGG...GAUAC A GUUUA...UCU-3'@LB@ GUUCGCG UGGUU@LB@ ||||:|| |||:|@LB@ CAAGUGC ACCGA@LB@3'-CGC...GUUUU A AAUCA...AAG-5'@LB@ | |@LB@ 87 73@LB@@LB@@LB@Energy -9.59 kcal/mol@LB@Hybridization Energy -15.4589 kcal/mol@LB@Unfolding Energy - mRNA 5.35611 kcal/mol@LB@Unfolding Energy - sRNA 0.513318 kcal/mol@LB@@LB@Position - mRNA 245 -- 257@LB@Position - sRNA 74 -- 86@LB@Position Seed - mRNA 245 -- 251@LB@Position Seed - sRNA 80 -- 86@LB@ |
151 |
0.02561 |
0.5485 |
b4041 |
plsB |
-9.39 |
0.134646 |
197 -- 210 |
74 -- 86 |
glycerol-3-phosphate O-acyltransferase |
|
_____________196____________211\n_____________|______________|\n5'-UCG...ACAUC________CC____GGCCA...UGG-3'\n______________GUUUAUGU__GGCU\n______________|||:|:||__||||\n______________CAAGUGCA__CCGA\n3'-CGC...GUUUU________A_____AAUCA...AAG-5'\n_____________|______________|\n_____________87_____________73\n |
198 -- 204 |
79 -- 85 |
-13.0466 kcal/mol |
3.14742 kcal/mol |
0.513318 kcal/mol |
196 211@LB@ | |@LB@5'-UCG...ACAUC CC GGCCA...UGG-3'@LB@ GUUUAUGU GGCU@LB@ |||:|:|| ||||@LB@ CAAGUGCA CCGA@LB@3'-CGC...GUUUU A AAUCA...AAG-5'@LB@ | |@LB@ 87 73@LB@@LB@@LB@Energy -9.39 kcal/mol@LB@Hybridization Energy -13.0466 kcal/mol@LB@Unfolding Energy - mRNA 3.14742 kcal/mol@LB@Unfolding Energy - sRNA 0.513318 kcal/mol@LB@@LB@Position - mRNA 197 -- 210@LB@Position - sRNA 74 -- 86@LB@Position Seed - mRNA 198 -- 204@LB@Position Seed - sRNA 79 -- 85@LB@ |
136 |
0.02309 |
0.5385 |
b3223 |
nanE |
-8.63 |
0.180292 |
34 -- 47 |
74 -- 86 |
putative N-acetylmannosamine-6-P epimerase |
|
_____________33_____________48\n_____________|______________|\n5'-AUC...CUCGC_____G________GCGCC...AAA-3'\n______________GUUCA_CGUUGGUU\n______________|||||_||||||:|\n______________CAAGU_GCAACCGA\n3'-CGC...GUUUU______________AAUCA...AAG-5'\n_____________|______________|\n_____________87_____________73\n |
41 -- 47 |
74 -- 80 |
-15.9355 kcal/mol |
6.79344 kcal/mol |
0.513318 kcal/mol |
33 48@LB@ | |@LB@5'-AUC...CUCGC G GCGCC...AAA-3'@LB@ GUUCA CGUUGGUU@LB@ ||||| ||||||:|@LB@ CAAGU GCAACCGA@LB@3'-CGC...GUUUU AAUCA...AAG-5'@LB@ | |@LB@ 87 73@LB@@LB@@LB@Energy -8.63 kcal/mol@LB@Hybridization Energy -15.9355 kcal/mol@LB@Unfolding Energy - mRNA 6.79344 kcal/mol@LB@Unfolding Energy - sRNA 0.513318 kcal/mol@LB@@LB@Position - mRNA 34 -- 47@LB@Position - sRNA 74 -- 86@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 74 -- 80@LB@ |
153 |
0.02565 |
0.5485 |
b2764 |
cysJ |
-8.62 |
0.180864 |
16 -- 26 |
74 -- 84 |
sulfite reductase alpha subunit flavoprotein |
|
_____________15__________27\n_____________|___________|\n5'-UUC...UUUCA___G_______AAUCU...UUG-3'\n______________UUA_GUUGGUU\n______________|:|_|||||:|\n______________AGU_CAACCGA\n3'-CGC...UUUCA___G_______AAUCA...AAG-5'\n_____________|___________|\n_____________85__________73\n |
20 -- 26 |
74 -- 80 |
-11.948 kcal/mol |
2.81948 kcal/mol |
0.508159 kcal/mol |
15 27@LB@ | |@LB@5'-UUC...UUUCA G AAUCU...UUG-3'@LB@ UUA GUUGGUU@LB@ |:| |||||:|@LB@ AGU CAACCGA@LB@3'-CGC...UUUCA G AAUCA...AAG-5'@LB@ | |@LB@ 85 73@LB@@LB@@LB@Energy -8.62 kcal/mol@LB@Hybridization Energy -11.948 kcal/mol@LB@Unfolding Energy - mRNA 2.81948 kcal/mol@LB@Unfolding Energy - sRNA 0.508159 kcal/mol@LB@@LB@Position - mRNA 16 -- 26@LB@Position - sRNA 74 -- 84@LB@Position Seed - mRNA 20 -- 26@LB@Position Seed - sRNA 74 -- 80@LB@ |
57 |
0.01133 |
0.5385 |
b0026 |
ileS |
-8.45 |
0.192830 |
289 -- 299 |
74 -- 83 |
isoleucyl-tRNA synthetase |
|
_____________288_________300\n_____________|___________|\n5'-AUG...GCUGG________A__G-3'\n______________CGCGUUGG_CU\n______________|:||||||_||\n______________GUGCAACC_GA\n3'-CGC...UUCAA___________AAUCA...AAG-5'\n_____________|___________|\n_____________84__________73\n |
290 -- 296 |
76 -- 82 |
-13.1796 kcal/mol |
4.23376 kcal/mol |
0.494551 kcal/mol |
288 300@LB@ | |@LB@5'-AUG...GCUGG A G-3'@LB@ CGCGUUGG CU@LB@ |:|||||| ||@LB@ GUGCAACC GA@LB@3'-CGC...UUCAA AAUCA...AAG-5'@LB@ | |@LB@ 84 73@LB@@LB@@LB@Energy -8.45 kcal/mol@LB@Hybridization Energy -13.1796 kcal/mol@LB@Unfolding Energy - mRNA 4.23376 kcal/mol@LB@Unfolding Energy - sRNA 0.494551 kcal/mol@LB@@LB@Position - mRNA 289 -- 299@LB@Position - sRNA 74 -- 83@LB@Position Seed - mRNA 290 -- 296@LB@Position Seed - sRNA 76 -- 82@LB@ |
111 |
0.01894 |
0.5385 |
b2600 |
tyrA |
-7.88 |
0.238290 |
191 -- 206 |
74 -- 89 |
fused chorismate mutase T/prephenate dehydrogenase |
|
_____________190______________207\n_____________|________________|\n5'-UCG...CUUAA_________UA_____GCUGA...UGG-3'\n______________GAGGUUUAU__UGGUU\n______________:|:|||:|:__|||:|\n______________UUUCAAGUG__ACCGA\n3'-CGC...GGCGU_________CA_____AAUCA...AAG-5'\n_____________|________________|\n_____________90_______________73\n |
193 -- 199 |
81 -- 87 |
-12.4695 kcal/mol |
4.06959 kcal/mol |
0.517373 kcal/mol |
190 207@LB@ | |@LB@5'-UCG...CUUAA UA GCUGA...UGG-3'@LB@ GAGGUUUAU UGGUU@LB@ :|:|||:|: |||:|@LB@ UUUCAAGUG ACCGA@LB@3'-CGC...GGCGU CA AAUCA...AAG-5'@LB@ | |@LB@ 90 73@LB@@LB@@LB@Energy -7.88 kcal/mol@LB@Hybridization Energy -12.4695 kcal/mol@LB@Unfolding Energy - mRNA 4.06959 kcal/mol@LB@Unfolding Energy - sRNA 0.517373 kcal/mol@LB@@LB@Position - mRNA 191 -- 206@LB@Position - sRNA 74 -- 89@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 81 -- 87@LB@ |
196 |
0.0344 |
0.5559 |
b0954 |
fabA |
-7.50 |
0.274211 |
100 -- 110 |
74 -- 84 |
beta-hydroxydecanoyl thioester dehydrase |
|
_____________99__________111\n_____________|___________|\n5'-GUG...GGCCA___________GAACU...ACA-3'\n______________UUACGUUGGCU\n______________|:|||||||||\n______________AGUGCAACCGA\n3'-CGC...UUUCA___________AAUCA...AAG-5'\n_____________|___________|\n_____________85__________73\n |
104 -- 110 |
74 -- 80 |
-16.8122 kcal/mol |
8.80896 kcal/mol |
0.508159 kcal/mol |
99 111@LB@ | |@LB@5'-GUG...GGCCA GAACU...ACA-3'@LB@ UUACGUUGGCU@LB@ |:|||||||||@LB@ AGUGCAACCGA@LB@3'-CGC...UUUCA AAUCA...AAG-5'@LB@ | |@LB@ 85 73@LB@@LB@@LB@Energy -7.50 kcal/mol@LB@Hybridization Energy -16.8122 kcal/mol@LB@Unfolding Energy - mRNA 8.80896 kcal/mol@LB@Unfolding Energy - sRNA 0.508159 kcal/mol@LB@@LB@Position - mRNA 100 -- 110@LB@Position - sRNA 74 -- 84@LB@Position Seed - mRNA 104 -- 110@LB@Position Seed - sRNA 74 -- 80@LB@ |