105 |
0.00174 |
0.07531 |
pa4182 |
N/A |
-13.56 |
0.025913 |
222 -- 265 |
39 -- 89 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________221__________________________________________________266\n_____________|____________________________________________________|\n5'-ACG...AUUUC____________C___CA____________GCA__C__________G_____UCCGC...CGG-3'\n______________GAAGAGUCCGAC__CG__GG_C_____GCU___CG_GCUGAUC_CG_GACUA\n______________||||||||||||__||__||_|_____|||___||_|||||||_||_|||:|\n______________CUUCUCAGGCUG__GC__CC_G_____CGA___GC_CGACUAG_GC_CUGGU\n3'-UUU...UUAGA____________AC__AC__A_AGAGU___AUG__________A__G_____CAACU...GUU-5'\n_____________|____________________________________________________|\n_____________90___________________________________________________38\n |
251 -- 257 |
48 -- 54 |
-52.115 kcal/mol |
19.5257 kcal/mol |
19.0319 kcal/mol |
221 266@LB@ | |@LB@5'-ACG...AUUUC C CA GCA C G UCCGC...CGG-3'@LB@ GAAGAGUCCGAC CG GG C GCU CG GCUGAUC CG GACUA@LB@ |||||||||||| || || | ||| || ||||||| || |||:|@LB@ CUUCUCAGGCUG GC CC G CGA GC CGACUAG GC CUGGU@LB@3'-UUU...UUAGA AC AC A AGAGU AUG A G CAACU...GUU-5'@LB@ | |@LB@ 90 38@LB@@LB@@LB@Energy -13.56 kcal/mol@LB@Hybridization Energy -52.115 kcal/mol@LB@Unfolding Energy - mRNA 19.5257 kcal/mol@LB@Unfolding Energy - sRNA 19.0319 kcal/mol@LB@@LB@Position - mRNA 222 -- 265@LB@Position - sRNA 39 -- 89@LB@Position Seed - mRNA 251 -- 257@LB@Position Seed - sRNA 48 -- 54@LB@ |
116 |
0.00199 |
0.07883 |
pa4478 |
N/A |
-13.34 |
0.029660 |
177 -- 225 |
39 -- 82 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________176____________________________________________________226\n_____________|______________________________________________________|\n5'-CAA...AUCGC__________UUCCC___AGC______________UC____U_______CU___CCUCG...AGU-3'\n______________CCGAC_GCGU_____GGG___CUC_CA___UGCCG__GCUG_AUCUCGC__CCG\n______________|||||_||||_____|||___|||_||___|:|||__||||_|||||||__||:\n______________GGCUG_CGCA_____CCC___GAG_GU___AUGGC__CGAC_UAGAGCG__GGU\n3'-UUU...UCUCA_____A____________A_____A__CGA___________________CU___CAACU...GUU-5'\n_____________|______________________________________________________|\n_____________83_____________________________________________________38\n |
214 -- 220 |
44 -- 50 |
-46.9389 kcal/mol |
14.7161 kcal/mol |
18.8872 kcal/mol |
176 226@LB@ | |@LB@5'-CAA...AUCGC UUCCC AGC UC U CU CCUCG...AGU-3'@LB@ CCGAC GCGU GGG CUC CA UGCCG GCUG AUCUCGC CCG@LB@ ||||| |||| ||| ||| || |:||| |||| ||||||| ||:@LB@ GGCUG CGCA CCC GAG GU AUGGC CGAC UAGAGCG GGU@LB@3'-UUU...UCUCA A A A CGA CU CAACU...GUU-5'@LB@ | |@LB@ 83 38@LB@@LB@@LB@Energy -13.34 kcal/mol@LB@Hybridization Energy -46.9389 kcal/mol@LB@Unfolding Energy - mRNA 14.7161 kcal/mol@LB@Unfolding Energy - sRNA 18.8872 kcal/mol@LB@@LB@Position - mRNA 177 -- 225@LB@Position - sRNA 39 -- 82@LB@Position Seed - mRNA 214 -- 220@LB@Position Seed - sRNA 44 -- 50@LB@ |
184 |
0.004799 |
0.1199 |
pa1298 |
N/A |
-15.65 |
0.006528 |
2 -- 21 |
39 -- 58 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________1_____________________22\n_____________|_____________________|\n__________5'-C____________C________UCAUG...GCG-3'\n______________GCCGGC_GAUUU_CGCGACCA\n______________:|||||_|||:|_||||||||\n______________UGGCCG_CUAGA_GCGCUGGU\n3'-UUU...UCGAA______A______________CAACU...GUU-5'\n_____________|_____________________|\n_____________59____________________38\n |
15 -- 21 |
39 -- 45 |
-31.6445 kcal/mol |
4.93108 kcal/mol |
11.0618 kcal/mol |
1 22@LB@ | |@LB@ 5'-C C UCAUG...GCG-3'@LB@ GCCGGC GAUUU CGCGACCA@LB@ :||||| |||:| ||||||||@LB@ UGGCCG CUAGA GCGCUGGU@LB@3'-UUU...UCGAA A CAACU...GUU-5'@LB@ | |@LB@ 59 38@LB@@LB@@LB@Energy -15.65 kcal/mol@LB@Hybridization Energy -31.6445 kcal/mol@LB@Unfolding Energy - mRNA 4.93108 kcal/mol@LB@Unfolding Energy - sRNA 11.0618 kcal/mol@LB@@LB@Position - mRNA 2 -- 21@LB@Position - sRNA 39 -- 58@LB@Position Seed - mRNA 15 -- 21@LB@Position Seed - sRNA 39 -- 45@LB@ |
117 |
0.002052 |
0.07999 |
pa0290 |
N/A |
-8.56 |
0.333144 |
143 -- 150 |
40 -- 47 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________142______151\n_____________|________|\n5'-CCU...UAUCG________CCUGC...AAC-3'\n______________UCGCGACC\n______________||||||||\n______________AGCGCUGG\n3'-UUU...ACUAG________UCAAC...GUU-5'\n_____________|________|\n_____________48_______39\n |
144 -- 150 |
40 -- 46 |
-14.5279 kcal/mol |
2.30284 kcal/mol |
3.66533 kcal/mol |
142 151@LB@ | |@LB@5'-CCU...UAUCG CCUGC...AAC-3'@LB@ UCGCGACC@LB@ ||||||||@LB@ AGCGCUGG@LB@3'-UUU...ACUAG UCAAC...GUU-5'@LB@ | |@LB@ 48 39@LB@@LB@@LB@Energy -8.56 kcal/mol@LB@Hybridization Energy -14.5279 kcal/mol@LB@Unfolding Energy - mRNA 2.30284 kcal/mol@LB@Unfolding Energy - sRNA 3.66533 kcal/mol@LB@@LB@Position - mRNA 143 -- 150@LB@Position - sRNA 40 -- 47@LB@Position Seed - mRNA 144 -- 150@LB@Position Seed - sRNA 40 -- 46@LB@ |
92 |
0.001266 |
0.06327 |
pa1307 |
N/A |
-13.15 |
0.033214 |
250 -- 278 |
41 -- 65 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________249___________________________279\n_____________|_____________________________|\n5'-UGC...CGUCU_______C_____A_____GCAG______GGCGG...GCG-3'\n______________UCAGCUU_ACCGG_CUGAU____CGCGGC\n______________|||||||_|||||_|||||____||||:|\n______________AGUCGAA_UGGCC_GACUA____GCGCUG\n3'-UUU...CAGAG___________________GA________GUCAA...GUU-5'\n_____________|_____________________________|\n_____________66____________________________40\n |
250 -- 256 |
59 -- 65 |
-34.6223 kcal/mol |
8.37343 kcal/mol |
13.1048 kcal/mol |
249 279@LB@ | |@LB@5'-UGC...CGUCU C A GCAG GGCGG...GCG-3'@LB@ UCAGCUU ACCGG CUGAU CGCGGC@LB@ ||||||| ||||| ||||| ||||:|@LB@ AGUCGAA UGGCC GACUA GCGCUG@LB@3'-UUU...CAGAG GA GUCAA...GUU-5'@LB@ | |@LB@ 66 40@LB@@LB@@LB@Energy -13.15 kcal/mol@LB@Hybridization Energy -34.6223 kcal/mol@LB@Unfolding Energy - mRNA 8.37343 kcal/mol@LB@Unfolding Energy - sRNA 13.1048 kcal/mol@LB@@LB@Position - mRNA 250 -- 278@LB@Position - sRNA 41 -- 65@LB@Position Seed - mRNA 250 -- 256@LB@Position Seed - sRNA 59 -- 65@LB@ |
58 |
0.0005047 |
0.0395 |
pa4066 |
N/A |
-14.62 |
0.013175 |
166 -- 238 |
44 -- 118 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________165______________________________________________________________________________________239\n_____________|________________________________________________________________________________________|\n5'-AUC...AUGGC____C___CC_________CCC_______U__C__________AU______CUCCC__ACC_______C___________________CCUGC...UGA-3'\n______________CUGU_GAU__GCCU_AUGA___GGAGAUA_UC________CCG__GCUGCG_____UG___GUC_CUC____UGCUGGCU___UUCGC\n______________|:||_|||__||||_||||___|||||||_||________|||__:|||||_____||___|||_|||____|:|:||||___:||||\n______________GGCA_CUA__CGGA_UACU___CCUCUAU_AG________GGC__UGACGC_____AC___CAG_GAG____AUGGCCGA___GAGCG\n3'-UUU...UUUUU________AU____C______________U__ACUUCUCA__________________C_____A___UCGA________CUA_____CUGGU...GUU-5'\n_____________|________________________________________________________________________________________|\n_____________119______________________________________________________________________________________43\n |
227 -- 233 |
52 -- 58 |
-54.201 kcal/mol |
16.2747 kcal/mol |
23.3102 kcal/mol |
165 239@LB@ | |@LB@5'-AUC...AUGGC C CC CCC U C AU CUCCC ACC C CCUGC...UGA-3'@LB@ CUGU GAU GCCU AUGA GGAGAUA UC CCG GCUGCG UG GUC CUC UGCUGGCU UUCGC@LB@ |:|| ||| |||| |||| ||||||| || ||| :||||| || ||| ||| |:|:|||| :||||@LB@ GGCA CUA CGGA UACU CCUCUAU AG GGC UGACGC AC CAG GAG AUGGCCGA GAGCG@LB@3'-UUU...UUUUU AU C U ACUUCUCA C A UCGA CUA CUGGU...GUU-5'@LB@ | |@LB@ 119 43@LB@@LB@@LB@Energy -14.62 kcal/mol@LB@Hybridization Energy -54.201 kcal/mol@LB@Unfolding Energy - mRNA 16.2747 kcal/mol@LB@Unfolding Energy - sRNA 23.3102 kcal/mol@LB@@LB@Position - mRNA 166 -- 238@LB@Position - sRNA 44 -- 118@LB@Position Seed - mRNA 227 -- 233@LB@Position Seed - sRNA 52 -- 58@LB@ |
87 |
0.001101 |
0.05816 |
pa1343 |
N/A |
-16.83 |
0.002748 |
192 -- 238 |
44 -- 87 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________191______________________________________________239\n_____________|________________________________________________|\n5'-UCG...CGCCU_______CCA____CUA_____AUCC_____C_______C_UG_____CGCAC...CCC-3'\n______________GGAGUCC___UGCG____UCUC____UCAGC_UGCUGGC_G__CUCGC\n______________:||||||___||||____||||____|||||_|:|:|||_|__|||||\n______________UCUCAGG___ACGC____AGAG____AGUCG_AUGGCCG_C__GAGCG\n3'-UUU...AGACU_______CUG____ACCC_____________A_______A_UA_____CUGGU...GUU-5'\n_____________|________________________________________________|\n_____________88_______________________________________________43\n |
192 -- 198 |
81 -- 87 |
-49.5275 kcal/mol |
13.8321 kcal/mol |
18.8647 kcal/mol |
191 239@LB@ | |@LB@5'-UCG...CGCCU CCA CUA AUCC C C UG CGCAC...CCC-3'@LB@ GGAGUCC UGCG UCUC UCAGC UGCUGGC G CUCGC@LB@ :|||||| |||| |||| ||||| |:|:||| | |||||@LB@ UCUCAGG ACGC AGAG AGUCG AUGGCCG C GAGCG@LB@3'-UUU...AGACU CUG ACCC A A UA CUGGU...GUU-5'@LB@ | |@LB@ 88 43@LB@@LB@@LB@Energy -16.83 kcal/mol@LB@Hybridization Energy -49.5275 kcal/mol@LB@Unfolding Energy - mRNA 13.8321 kcal/mol@LB@Unfolding Energy - sRNA 18.8647 kcal/mol@LB@@LB@Position - mRNA 192 -- 238@LB@Position - sRNA 44 -- 87@LB@Position Seed - mRNA 192 -- 198@LB@Position Seed - sRNA 81 -- 87@LB@ |
120 |
0.002089 |
0.07999 |
pa3670 |
N/A |
-15.68 |
0.006401 |
170 -- 246 |
44 -- 120 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________169________________________________________________________________________________________247\n_____________|__________________________________________________________________________________________|\n5'-GCU...CGGUC________AGAA____GA___________________________GAAAC_____UU_______U___GCCGG____UU_______G___UGGCG...GGC-3'\n______________GACC_UGA____AGCC__AUGAGGGG__________GAGU_CGAU_____GCGUG__GUC_CUC_GGC_____GCUG__GCUGAUC_CGC\n______________:|||_|||____||||__||||||:|__________||||_|||:_____|||||__|||_|||_:||_____:|:|__|||||||_|||\n______________UUGG_ACU____UCGG__UACUCCUC__________CUCA_GCUG_____CGCAC__CAG_GAG_UCG_____UGGC__CGACUAG_GCG\n3'-UUU...AGUUU____C___AA______AC________UAUUAGACUU____G____A_________C____A_______AA________________A___CUGGU...GUU-5'\n_____________|__________________________________________________________________________________________|\n_____________121________________________________________________________________________________________43\n |
236 -- 242 |
48 -- 54 |
-64.9835 kcal/mol |
25.9985 kcal/mol |
23.3102 kcal/mol |
169 247@LB@ | |@LB@5'-GCU...CGGUC AGAA GA GAAAC UU U GCCGG UU G UGGCG...GGC-3'@LB@ GACC UGA AGCC AUGAGGGG GAGU CGAU GCGUG GUC CUC GGC GCUG GCUGAUC CGC@LB@ :||| ||| |||| ||||||:| |||| |||: ||||| ||| ||| :|| :|:| ||||||| |||@LB@ UUGG ACU UCGG UACUCCUC CUCA GCUG CGCAC CAG GAG UCG UGGC CGACUAG GCG@LB@3'-UUU...AGUUU C AA AC UAUUAGACUU G A C A AA A CUGGU...GUU-5'@LB@ | |@LB@ 121 43@LB@@LB@@LB@Energy -15.68 kcal/mol@LB@Hybridization Energy -64.9835 kcal/mol@LB@Unfolding Energy - mRNA 25.9985 kcal/mol@LB@Unfolding Energy - sRNA 23.3102 kcal/mol@LB@@LB@Position - mRNA 170 -- 246@LB@Position - sRNA 44 -- 120@LB@Position Seed - mRNA 236 -- 242@LB@Position Seed - sRNA 48 -- 54@LB@ |
144 |
0.003137 |
0.1001 |
pa1516 |
N/A |
-10.35 |
0.151671 |
51 -- 72 |
44 -- 62 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________50_____________________73\n_____________|______________________|\n5'-GUG...GGCCU__A_____________GG____CCGGC...AGA-3'\n______________GC_UUGCCGGUUGAUC__UCGC\n______________||_||:||||:|||||__||||\n______________CG_AAUGGCCGACUAG__AGCG\n3'-UUU...AGAGU______________________CUGGU...GUU-5'\n_____________|______________________|\n_____________63_____________________43\n |
57 -- 63 |
51 -- 57 |
-28.648 kcal/mol |
8.16614 kcal/mol |
10.1396 kcal/mol |
50 73@LB@ | |@LB@5'-GUG...GGCCU A GG CCGGC...AGA-3'@LB@ GC UUGCCGGUUGAUC UCGC@LB@ || ||:||||:||||| ||||@LB@ CG AAUGGCCGACUAG AGCG@LB@3'-UUU...AGAGU CUGGU...GUU-5'@LB@ | |@LB@ 63 43@LB@@LB@@LB@Energy -10.35 kcal/mol@LB@Hybridization Energy -28.648 kcal/mol@LB@Unfolding Energy - mRNA 8.16614 kcal/mol@LB@Unfolding Energy - sRNA 10.1396 kcal/mol@LB@@LB@Position - mRNA 51 -- 72@LB@Position - sRNA 44 -- 62@LB@Position Seed - mRNA 57 -- 63@LB@Position Seed - sRNA 51 -- 57@LB@ |
1 |
0 |
0 |
pa3775 |
N/A |
-6.65 |
0.627514 |
32 -- 38 |
50 -- 56 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
|
_____________31______39\n_____________|_______|\n5'-CGA...CGGCA_______AGCCG...UGU-3'\n______________CGGCUGA\n______________|||||||\n______________GCCGACU\n3'-UUU...GAAUG_______AGAGC...GUU-5'\n_____________|_______|\n_____________57______49\n |
32 -- 38 |
50 -- 56 |
-12.177 kcal/mol |
0.20262 kcal/mol |
5.33178 kcal/mol |
31 39@LB@ | |@LB@5'-CGA...CGGCA AGCCG...UGU-3'@LB@ CGGCUGA@LB@ |||||||@LB@ GCCGACU@LB@3'-UUU...GAAUG AGAGC...GUU-5'@LB@ | |@LB@ 57 49@LB@@LB@@LB@Energy -6.65 kcal/mol@LB@Hybridization Energy -12.177 kcal/mol@LB@Unfolding Energy - mRNA 0.20262 kcal/mol@LB@Unfolding Energy - sRNA 5.33178 kcal/mol@LB@@LB@Position - mRNA 32 -- 38@LB@Position - sRNA 50 -- 56@LB@Position Seed - mRNA 32 -- 38@LB@Position Seed - sRNA 50 -- 56@LB@ |