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metaMIR 7437261

Input and runtime details for job 7437261 (precomputed example)

Input

? List of genes analyzed
APC AXIN1 AXIN2 BAMBI CTNNB1 DVL1 DVL2 DVL3 FZD3 FZD6 GSK3B LEF1 LRP5 LRP6 TCF7 TCF7L1 TCF7L2 WNT1
? Minimum number of genes per cluster5
? Maximum number of genes per cluster20
? Minimum score to return1.1

Job ID 7437261 (server version 4.3.0)

?Job Submitted & Queued@ Mon Aug 08 10:13:07 CEST 2016
?metaMIR Started@ Mon Aug 08 10:13:09 CEST 2016
?metaMIR Finished & Post-Processing@ Mon Aug 08 10:13:45 CEST 2016
?Job Completed@ Mon Aug 08 10:13:45 CEST 2016
 DIRECT ACCESS: http://rna.informatik.uni-freiburg.de/RetrieveResults.jsp?jobID=7437261&toolName=metaMIR ( 30 days expiry )

Description of the job

example1

An example of a standard analysis in metaMIR, where the prediction is conducted such that all genes are potential targets for down-regulation by the returned miRNAs.

Output

Download an archive file containing the complete results produced by the job in [.zip] format.

Results file content

[1] "input= /scratch/rna/bisge001/RNA_results/CARNA-result//metaMIR_7437261//input_genes 5 20 1.1 /scratch/rna/bisge001/RNA_results/CARNA-result//metaMIR_7437261/" [1] "All entered genes ok." [1] "Partitioning positive genelist" [1] "Analyzing 1 list from 18 pos genes entered." | | | 0% | |======================================================================| 100%[1] "Writing results"

When using metaMIR please cite :

Results are computed with metaMIR version 1.0.0 using R 3.2.1
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