lmo1481 |
1 |
24 |
10 |
16 |
4.01 |
LhrA2 |
151 |
181 |
159 |
165 |
3.36 |
-15.05 |
-22.42 |
-1.4191 |
AUGCUGCCAGAAUGGAAACAGAUA&UAUUUGUUUUCAUUCAUCUCAUUGGCCGUGU |
((((.(((((((((((((((((((&))))))))))))))).......)))).)))) |
UGAAAUAAAACUUGCUAUCUCUUAUUUCAUGUUUUACCAUAGAAAGAGAAAUAAGAGUGAAGCGAGGCGAAAUGAAUGCUGCCAGAAUGGAAACAGAUACGCUCCAAAAAAAUAACGCCGGUGUAUUUAAUCAUCGGUACAGAAGAUUAU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0149116 |
0.9011628 |
holA |
986943 |
DNA polymerase III subunit delta |
lmo1454 |
-29 |
16 |
10 |
16 |
7.93 |
LhrA2 |
154 |
211 |
154 |
160 |
7.93 |
-14.13 |
-29.99 |
-1.33235 |
GCAUUUUGGAAGGAGGAAUACAGGCAGUUAUGAGUGAUAAAACAA&UUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGC |
((((...(((..((((..(((((((....((((((((.(((((((&)))))))...))).)))))..))).)))).............)))).)))....)))) |
AAUGAUGGUAUUAUUACCUAAGAGAAGCCUUUUAAUAAGGUUAGCGGCAUUUUGGAAGGAGGAAUACAGGCAGUUAUGAGUGAUAAAACAAAAAACACAAAACCAGUUGCUGAACUAAGUGUUGAGCAAGUAAAAGAAGCCCUGAUAGAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.02415 |
0.9474659 |
rpoD |
984456 |
RNA polymerase sigma factor RpoD |
lmo1717 |
-6 |
17 |
11 |
17 |
3.74 |
LhrA2 |
147 |
170 |
147 |
153 |
1.67 |
-15.35 |
-20.76 |
-1.44738 |
GAGACGAUGAAAAUGGAUAGUGA&UCAUUAUUUGUUUUCAUUCAUCUC |
((((.((((((((((((((((((&)))))))))))))))).)).)))) |
AUAUUACACUUAGCUAAAUGGAAUGUUCUUCCAUUUAAAAAUAAAUGUGAAUAAUAAUACAUAAAGUAGGAGACGAUGAAAAUGGAUAGUGAAACACUAUUAUUAGAUGUAAAGAAAUUAGGAGAAAGAGUAUCUACGCUUAAGGAUUCG |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0126946 |
0.8870739 |
|
985593 |
|
lmo1828 |
11 |
21 |
14 |
20 |
0.66 |
LhrA2 |
201 |
211 |
202 |
208 |
2.18 |
-16.11 |
-18.95 |
-1.51905 |
GCAUGACGGGA&UCCCGUUAUGC |
(((((((((((&))))))))))) |
UGGUAUAAUAAGAAGUCAGAACAAAUUUCAAGUAAUCUUAGAGGGAACUUUAAGUUAUGAAAGGUGUCUUGCCAAAUGGUGAAAAGCAUGACGGGAUUUGGGCGUGCCACAAAAGAAUUUGAAGCGUUCAAAGUAACCAUUGAAUUAAAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0083732 |
0.863511 |
|
985886 |
|
lmo0302 |
-15 |
26 |
14 |
20 |
4.67 |
LhrA2 |
167 |
204 |
176 |
182 |
6.87 |
-14.58 |
-26.12 |
-1.37478 |
GGAGAUGAAUAGAUGAUGAAAAAAACAGUACACGGAUGGGA&UCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCC |
((.((((((((((..(((((........(((((((((((((&))))))...))))))).))))).)))))...))))))) |
UUGGUUUGGAAUUUAAAGGUUACUAGGAUAUGAUGAUAGUUAGAGAGAAAAUAUUACAUAGGAGAUGAAUAGAUGAUGAAAAAAACAGUACACGGAUGGGAAAUAAUAUCUAGUUUAGACGUACGAGUAUACCAAGAUGAAGCUGGCGGG |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0191177 |
0.9128702 |
|
987513 |
lmo0302 |
lmo1403 |
-17 |
22 |
16 |
22 |
6.24 |
LhrA2 |
169 |
208 |
169 |
175 |
7.22 |
-16.71 |
-30.17 |
-1.57562 |
UAAGGGAUGAUGAGAUAAUGACAGAAUAUACACCAAUGA&UCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUA |
(((.((..((((((.....((((((((((((.(((((((&)))))))..))))).))).)))).....)))))))).))) |
UCUUUUGCGGUCGCGGGAAAAUGAAACUUUAUGCUAUAAUGAGAGGAUGAAAAAGAAGUAAGGGAUGAUGAGAUAAUGACAGAAUAUACACCAAUGAUUAAGCAGUACUUGGAAAUCAAAGACAAAUAUCAAGAUGCUUUCUUAUUUUUC |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0059768 |
0.863511 |
mutS |
985419 |
DNA mismatch repair protein MutS |
lmo2615 |
-18 |
25 |
19 |
25 |
6.27 |
LhrA2 |
155 |
202 |
155 |
161 |
7.03 |
-17.05 |
-30.35 |
-1.60768 |
GAAGGAGGGACAUAUUACAUGCCUGAGCAAAUUGAUGGAAACA&UGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUC |
((..(((((((((((((((((((((((.....(((((((((((&)))))))).))).))))..)).))))))))..)))))....)))).)) |
GGCCGCGUGAAAGCUCUUGCUGAAGCAGCUCGCGAAAAUGGACUAGAAUUUUAAUAAGAAGGAGGGACAUAUUACAUGCCUGAGCAAAUUGAUGGAAACAAAUUAGAUUUAGAAGAACGCGUUGUUACAAUCAACCGUGUUGCUAAAGUA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0049203 |
0.863511 |
rpsE |
987198 |
30S ribosomal protein S5 |
lmo1161 |
-12 |
36 |
19 |
25 |
8.89 |
LhrA2 |
158 |
204 |
170 |
176 |
7.06 |
-16.94 |
-32.89 |
-1.59731 |
GGAGGUGGAAAAAUGGAUAUUUUACAAACAGCCAAUGAACGAAUGGAA&UUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCC |
((.((((.....((((((((.......((.((((((((..((((((((&))))))))...)))))))).)).......))))))))....)))))) |
AGCGAACGCGGCAGAUAUUGCUGGCACGAAUUUUGCAAAAAUAAUCAAGUCGUGAUCUGGUAAGGAGGUGGAAAAAUGGAUAUUUUACAAACAGCCAAUGAACGAAUGGAACAGCUUGCAGCGCUAAUGAAUAAAGAUAUCGAACAAAAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0052414 |
0.863511 |
|
986144 |
ethanolamine utilization protein EutJ |
lmo1575 |
-14 |
28 |
21 |
27 |
5.16 |
LhrA2 |
150 |
181 |
151 |
157 |
4.07 |
-13.9 |
-23.13 |
-1.31066 |
ACAGGGGCGAAAUGAUGAAAAAUGAGAUUUUACAACAAAUAA&UUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGU |
(((.((.(((...(((((...((((((.......((((((((&)))))))))))))))))))...))).)).))) |
AGAAGGAAUUUUGACCGGAAAAGCAAUUGUCGCUUGUCAAAUGAUGGAACGUUAAAAUGAAACAGGGGCGAAAUGAUGAAAAAUGAGAUUUUACAACAAAUAAAGCAAUAUGAAACGAUUAUUUUGCAUAGACAUGUAAGACCAGAUCCA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.02717 |
0.9474659 |
|
986973 |
|
lmo1798 |
21 |
65 |
21 |
27 |
3.39 |
LhrA2 |
129 |
169 |
163 |
169 |
6.56 |
-13.42 |
-23.37 |
-1.2654 |
AGAUGAACUUGAAAAUAAAAUUAUUGAUCAAUUGACAGAAGCAGA&UCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCU |
(((((((..((((((((((..((.((((..........(((((((&)))))))..........)))).))))))))))))))))))) |
AUAGAGCCACAAUACAACGAUUCCCUGUCGCUAAGAAAAUUUAGCGGCAGGGAAAUUAUAAAAGGAGUGGUACAUAUGCCUUGGAGAGGUAUAUUAGAUGAACUUGAAAAUAAAAUUAUUGAUCAAUUGACAGAAGCAGAAGAGCACGCC |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.034623 |
0.9493467 |
|
985932 |
|