lmo1454 |
-29 |
16 |
10 |
16 |
7.93 |
LhrA2 |
154 |
211 |
154 |
160 |
7.93 |
-14.13 |
-29.99 |
-1.33235 |
GCAUUUUGGAAGGAGGAAUACAGGCAGUUAUGAGUGAUAAAACAA&UUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGC |
((((...(((..((((..(((((((....((((((((.(((((((&)))))))...))).)))))..))).)))).............)))).)))....)))) |
AAUGAUGGUAUUAUUACCUAAGAGAAGCCUUUUAAUAAGGUUAGCGGCAUUUUGGAAGGAGGAAUACAGGCAGUUAUGAGUGAUAAAACAAAAAACACAAAACCAGUUGCUGAACUAAGUGUUGAGCAAGUAAAAGAAGCCCUGAUAGAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.02415 |
0.9474659 |
rpoD |
984456 |
RNA polymerase sigma factor RpoD |
lmo1481 |
1 |
24 |
10 |
16 |
4.01 |
LhrA2 |
151 |
181 |
159 |
165 |
3.36 |
-15.05 |
-22.42 |
-1.4191 |
AUGCUGCCAGAAUGGAAACAGAUA&UAUUUGUUUUCAUUCAUCUCAUUGGCCGUGU |
((((.(((((((((((((((((((&))))))))))))))).......)))).)))) |
UGAAAUAAAACUUGCUAUCUCUUAUUUCAUGUUUUACCAUAGAAAGAGAAAUAAGAGUGAAGCGAGGCGAAAUGAAUGCUGCCAGAAUGGAAACAGAUACGCUCCAAAAAAAUAACGCCGGUGUAUUUAAUCAUCGGUACAGAAGAUUAU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0149116 |
0.9011628 |
holA |
986943 |
DNA polymerase III subunit delta |
lmo1507 |
-25 |
4 |
-11 |
-5 |
2.75 |
LhrA2 |
147 |
173 |
155 |
161 |
1.7 |
-16.85 |
-21.3 |
-1.58882 |
AAUGUAAGAGGAGUGAGAACAGAAUAUGA&UCAUUAUUUGUUUUCAUUCAUCUCAUU |
((((..(((.(((((((((((((..((((&))))..))))))))))))).))))))) |
CGCGAAAAAAAUAAUUUGGCUUGAUUAUUAGGUCUAAUUAGGCUAGUUUUAAUGUAAGAGGAGUGAGAACAGAAUAUGAAAUUACUUAUGAUAGAAGAUAAUGUAAGUGUCUGUGAAAUGAUAGAAAUGUUCUUUAUGAAAGAAGAAAUU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0055185 |
0.863511 |
|
987756 |
response regulator |
lmo1517 |
-59 |
-32 |
-44 |
-38 |
6.39 |
LhrA2 |
172 |
198 |
178 |
184 |
6.53 |
-14 |
-26.92 |
-1.32009 |
AGGACUUGAUUUGACACUGCACGGCGAA&UUGGCCGUGUAGUUCAUGUCUAUGCCU |
(((....((..(((.((((((((((.((&)).)))))))))))))..))....))) |
AAGAACAAGAGUACAAAGGACUUGAUUUGACACUGCACGGCGAAAAAGCAUAUCAAGAAUAAAGGAGGCAACAAUAUGUCUGGAUUAACAAAAAUCGAAAUUAUUACUCGCCCAAAUCGCUUUCAUUUAUUUCAAAAAGAACUUGCAAAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0258166 |
0.9474659 |
|
987779 |
nitrogen regulatory PII protein |
lmo1572 |
1 |
26 |
9 |
15 |
8.3 |
LhrA2 |
157 |
179 |
165 |
171 |
2.12 |
-17.19 |
-27.61 |
-1.62088 |
AUGGCGAAUGAGAUGGAAUUUGAGAA&UUUUCAUUCAUCUCAUUGGCCGU |
(((((.(((((((((((...((((((&))))))))))))))))).))))) |
GUCUUGAUUUGCAAAAUAAGUUAAGUUUUAUUUUAAGCAUUCAUGUGAAAGCACCUGGAGUAGGGGGUGAAGUUGAUGGCGAAUGAGAUGGAAUUUGAGAAACCGAUUUUAGAAUUAAAAAGUAAGAUCGCUGACUUAAAAGAGUACAAU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0045383 |
0.863511 |
accA |
986992 |
acetyl-CoA carboxylase carboxyltransferase subunit alpha |
lmo1575 |
-14 |
28 |
21 |
27 |
5.16 |
LhrA2 |
150 |
181 |
151 |
157 |
4.07 |
-13.9 |
-23.13 |
-1.31066 |
ACAGGGGCGAAAUGAUGAAAAAUGAGAUUUUACAACAAAUAA&UUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGU |
(((.((.(((...(((((...((((((.......((((((((&)))))))))))))))))))...))).)).))) |
AGAAGGAAUUUUGACCGGAAAAGCAAUUGUCGCUUGUCAAAUGAUGGAACGUUAAAAUGAAACAGGGGCGAAAUGAUGAAAAAUGAGAUUUUACAACAAAUAAAGCAAUAUGAAACGAUUAUUUUGCAUAGACAUGUAAGACCAGAUCCA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.02717 |
0.9474659 |
|
986973 |
|
lmo1584 |
-2 |
11 |
-2 |
5 |
2.47 |
LhrA2 |
169 |
181 |
175 |
181 |
2 |
-15.55 |
-20.02 |
-1.46624 |
ACAUGGCUAAUGA&UCAUUGGCCGUGU |
(((((((((((((&))))))))))))) |
UUAAAUUAACUGGUACACUUAAAGCGCCAAGAAUGAUGUAUUUAUAUGGAGAAUAAUGUGAGAGGAGAGGCGCACAUGGCUAAUGAAAAUGUUACUUUUGAAAGUAAACGCCAAGUCUAUCAUUAUGAACCAUCUAUUCCGAAAGAAGAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0113911 |
0.863511 |
|
986942 |
|
lmo1631 |
-59 |
-38 |
-51 |
-45 |
4.57 |
LhrA2 |
148 |
170 |
155 |
161 |
1.67 |
-13.79 |
-20.03 |
-1.30029 |
GAAUGACGGAAAACAAAUGAUG&CAUUAUUUGUUUUCAUUCAUCUC |
((((((..((((((((((((((&))))))))))))))..)))).)) |
CUGAAUCAAUUGGUACGAAUGACGGAAAACAAAUGAUGGAAAACUUUAUUCAUAUAGUGGAAGGGGCGCGAGAAAAUGGAAAUCUUACUACAAAAAGUAUAUGACCAAGAAAAUUUAUCCAAAGAAGAAAUGAAUAUUAUCGCAACAGAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0287341 |
0.9493467 |
trpD |
985706 |
anthranilate phosphoribosyltransferase |
lmo1659 |
23 |
35 |
27 |
33 |
2.38 |
LhrA2 |
169 |
181 |
171 |
177 |
2 |
-13.48 |
-17.86 |
-1.27106 |
ACAAGGCCGAUGA&UCAUUGGCCGUGU |
(((.(((((((((&))))))))).))) |
CAUUGUGCACAAAUGCACAAUAUAUAAAAAAAUGUUAAACUUACCCUACAUUAUAAGCAAGGAGGUGAAUAUCCUAUGAUUACGUACUAUUUUAAUAACAAGGCCGAUGACAAAGGUAGGCACGAGGUACAUGAAAGAACUUGUAGAUAU |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0335984 |
0.9493467 |
|
985672 |
lmo1659 |
lmo1666 |
-46 |
7 |
-7 |
-1 |
7.72 |
LhrA2 |
157 |
204 |
164 |
170 |
7.08 |
-16.3 |
-31.1 |
-1.53696 |
GGGAUAAAAUAAUUGGGGGACUUUUAAAAAAGGGAGAUGGGGAUGAAUGAAAA&UUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCC |
((((.........((((((((..........((......((((((((((((((&)))))))))))))).....))...........)))....))))))))) |
GGAAUAACAUGACAAUAGCUUUAGGAAUGGGGAUAAAAUAAUUGGGGGACUUUUAAAAAAGGGAGAUGGGGAUGAAUGAAAAGUAAAUUUUUUAUAGGCAUGAUGACUUUUUUGCUAUCAUUAAUUUGUCUUACUGGAAUGAAAGCAGAA |
AGGAUAGAGUUUUACCUCGAUGAAAGUUUCAUUUUUACUAAUGUGAUUUUCAUGGGGAUAAGACCCUAUCAUGGUUAUAAUGACUUUUGGUGUAUCCAUCUUCCAAUAGAAUGGCAACUAGUCAGACAUCUGUUUAGACACCAAAAUCAUUAUUUGUUUUCAUUCAUCUCAUUGGCCGUGUAGUUCAUGUCUAUGCCUCAUCCCGUUAUGCAUAGGCGCCCGAACAUGAUGGCAACGCUGGAAAUGUUUAUUUCGAGCGUCUUUUUUUG |
0.0075316 |
0.863511 |
|
985661 |
peptidoglycan-linked protein |