id1;start1;end1;seedStart1;seedEnd1;ED1;id2;start2;end2;seedStart2;seedEnd2;ED2;E;E_hybrid;E_norm;subseqDP;hybridDP;seq1;seq2;p-value;fdr;geneName;entrez_gene_id;annotation
b1683;8;33;27;33;4.83;RyhB;38;66;38;44;3.3;-21.41;-29.54;-2.25121;GUAAUACUGAAGCAACUGACGAUGUC&GACAUUGCUCACAUUGCUUCCAGUAUUAC;(((((((((((((((.((((((((((&))))))).)))..)))))).)))))))));GAUAUUCAAAUUUCACAACCCUAAAGCCCAGAAUGAAUGUGGCUGUGGCGAAAGCUUUGGGGUAUAGGCGGUACUAUGUCUCGUAAUACUGAAGCAACUGACGAUGUCAAAACCUGGACCGGCGGCCCGCUGAAUUAUAAAGAAGGAUUC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;4.71e-05;0.1636725;sufB;945753;component of SufBCD Fe-S cluster assembly scaffold
b0894;-38;-18;-24;-18;3.25;RyhB;43;62;43;49;3.3;-19.93;-26.48;-2.09559;UACUGGAAUCAAUCGUGAGCA&UGCUCACAUUGCUUCCAGUA;((((((((.((((.(((((((&))))))))))).))))))));CGAACUGCUAUAGAAAUAAUUACACAAUACGGUUUGUUACUGGAAUCAAUCGUGAGCAAGCUUGAGUGAGCCAUUAUGAAAACGAAAAUCCCUGAUGCGGUAUUGGCUGCUGAGGUGAGUCGCCGUGGUUUGGUAAAAACGACAGCGAUC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0001337;0.1837117;dmsA;945508;dimethyl sulfoxide reductase anaerobic subunit A
b3743;40;66;42;48;7.94;RyhB;34;60;52;58;6.76;-19.68;-34.38;-2.0693;CUGGAAGCAUUAAUGGGCAAUGCGCGC&GCACGACAUUGCUCACAUUGCUUCCAG;(((((((((....(((((((((((.((&)).)).)))))))))...)))))))));AGCCUAACUCACUUUUGAUUCAUUAAAAAAGAAGGCUAAAAUAGAAUGAAUCAUCAAUCCGCAUAAGAAAAUCCUAUGGAAAAUUAUCUGAUCGACAAUCUGGACCGUGGCAUCCUGGAAGCAUUAAUGGGCAAUGCGCGCACCGCUUAC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0001586;0.1837117;asnC;948259;transcriptional activator of asnA autorepressor
b4255;-63;-43;-62;-56;5.2;RyhB;39;59;52;58;3.27;-18.09;-26.56;-1.90212;UGGAGGCAAUGUCAGUGGUGU&ACAUUGCUCACAUUGCUUCCA;((((((((((((.((((((((&)))))))).))))))))))));UUGUCACAAAGGUGGAGGCAAUGUCAGUGGUGUGUGACAAUAAGAGUAUCGGCAGGACAUUAAGAGGAAUGAGCCAUGGCAAACCCGGAACAACUGGAAGAACAGCGUGAAGAAACACGUUUGAUUAUUGAAGAAUUACUGGAAGAUGGC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0004554;0.3956288;rraB;948773;protein inhibitor of RNase E
b2170;-33;-7;-33;-27;3.48;RyhB;2;24;18;24;7.69;-17.18;-28.35;-1.80643;CUCCGCGUCUUCCUCUUCCAGUGAUCG&CGAUCAGGAAGACCCUCGCGGAG;(((((((......((((((..((((((&))))))))))))....)))))));UUUGAUUUCGCUGUCUGUUUAUUUUCUGACAAGCAGCGUAAACUCCGCGUCUUCCUCUUCCAGUGAUCGACCAGCAUGCAUAACUCCCCCGCAGUCUCCAGCGCGAAAUCGUUUGACCUGACCUCGACGGCGUUUUUAAUCGUUGCCUUU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0008131;0.5651045;setB;946673;lactose/glucose efflux system
b4019;-10;7;-1;6;4.63;RyhB;43;58;44;50;3.2;-16.82;-24.65;-1.76858;GGGAGCAAGUGUGAGCA&UGCUCACAUUGCUUCC;((((((((.((((((((&))))))))))))))));UACCACAGAUGCGUUUAUGCCAGUAUGGUUUGUUGAAUUUUUAUUAAAUCUGGGUUGAGCGUGUCGGGAGCAAGUGUGAGCAGCAAAGUGGAACAACUGCGUGCGCAGUUAAAUGAACGUAUUCUGGUGCUGGACGGCGGUAUGGGCACC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.001018;0.5895917;metH;948522;homocysteine-N5-methyltetrahydrofolate transmethylase B12-dependent
b1181;49;69;60;66;3.61;RyhB;37;60;41;47;3.3;-16.27;-23.18;-1.71075;CUGGACGAAAUGAGCGAUGCG&CGACAUUGCUCACAUUGCUUCCAG;((((((((..(((((((((((&)).)))))))))..)))..)))));ACUUUUUGCCGCCUGAAAGCGGCGGCAAAACUUGCAUCGCUGUGCCAGACUGGUUAUAAGGUGCGUUUUAACGUAAUGGCGGAACACCUGAUGAGCGAUGUACCUUUCUGGCAAAGUAAAACCCUGGACGAAAUGAGCGAUGCGGAAUGG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0014284;0.7090986;ycgN;945804;UPF0153 family cysteine cluster protein
b4348;-73;-53;-59;-53;7.54;RyhB;40;66;40;46;3.3;-15.87;-26.71;-1.66869;GUGAACUGGGGGCGAGCGAUG&CAUUGCUCACAUUGCUUCCAGUAUUAC;(((((((((((((((((((((&)))))))).....))))))))).))));GCGUGAACUGGGGGCGAGCGAUGAGGCCGAUUUGCAGCGUCAGUUGCUGGAAGAAGCGUUUGGUGGGGUGAAGGAAUGAGUGCGGGGAAAUUGCCGGAGGGGUGGGUUAUCGCCCCAGUAUCUACGGUCACAACUCUAAUCCGAGGAGUA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0018209;0.7909534;hsdS;948867;specificity determinant for hsdM and hsdR
b3885;56;75;59;65;6.61;RyhB;41;62;53;59;3.3;-15.48;-25.39;-1.62768;UGCUGGGAGCCUGGAGCGAU&AUUGCUCACAUUGCUUCCAGUA;((((((((((.(((((((((&))))))).))..))))))))));UUCAUACCUUGCCACAUAGCCAAACCCAUCCUUUCCCGCUACAGUUAAUUUCUUGUGGCGCGAAAGGAGGCAAAAAUGCUCUAUAUCUUUGAUUUAGGUAAUGUGAUUGUCGAUAUCGACUUUAACCGUGUGCUGGGAGCCUGGAGCGAU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0023007;0.8637808;yihX;948380;alpha-D-glucose-1-phosphate phosphatase anomer-specific
b0313;54;75;56;62;0.92;RyhB;40;61;53;59;3.3;-15.35;-19.57;-1.61401;ACUGGAAGCAAUAAAUGAAGUG&CAUUGCUCACAUUGCUUCCAGU;((((((((((((......((((&))))......))))))))))));GACACAUUUUAUAUUGAACGUCCAAUCAAUAACCGCUUUAAUAGAUAAACACCGCUGAUGAAUGGAGUGGCGAAAAUGCCCAAAUUGGGGAUGCAGUCGAUCCGGCGCAGACAACUGAUCGACGCCACACUGGAAGCAAUAAAUGAAGUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0024857;0.8637808;betI;944981;choline-inducible betIBA-betT divergent operon transcriptional repressor
b1120;-17;5;-7;-1;9.07;RyhB;46;68;52;58;3.24;-14.88;-27.19;-1.5646;AAGUGGUGCCGGAAGCAAUGGA&UCACAUUGCUUCCAGUAUUACUU;(((((((((.((((((((((((&)).)))))))))).)))))))));CGUAAAAAUAAACGCCGCCUGCGCGAGCGUUUGCGUCAGCGUAUUUUUUUCAGAGAUAAAGUGGUGCCGGAAGCAAUGGAAAAACCAAGAGUACUCGUACUGACAGGGGCAGGAAUUUCUGCGGAAUCAGGUAUUCGUACCUUUCGCGCC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0032796;0.9291058;cobB;945687;deacetylase of acs and cheY chemotaxis regulator
b0722;-33;-15;-32;-26;4.14;RyhB;22;41;34;40;6.69;-14.16;-24.99;-1.48889;UGUCGUGCUUUCACUUCUC&GAGAACCUGAAAGCACGACA;(((((((((((((..((((&))))...)))))))))))));CGAAGCGGGUAAACGCUCCGCCAAAAUCUCCUUUGUUAUUACUGUCGUGCUUUCACUUCUCGCAGGAGUCCUCGUAUGGUAAGCAACGCCUCCGCAUUAGGACGCAAUGGCGUACAUGAUUUCAUCCUCGUUCGCGCUACCGCUAUCGUC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0049771;0.9291058;sdhD;945322;succinate dehydrogenase membrane subunit binds cytochrome b556
b3080;-59;-34;-44;-38;3.58;RyhB;1;25;6;12;7.71;-14.07;-25.36;-1.47943;UCCCAGCGACCAAAUCUUCCUGAUGC&GCGAUCAGGAAGACCCUCGCGGAGA;((((.((((.....((((((((((((&)).))))))))))...)))))).));AAAAUGCCUCUCACGAUCCCAGCGACCAAAUCUUCCUGAUGCAAUAUUUCUACUGGUAAUAAGGACUGUAAUUUCAUGAAAAUAAAAACUAUUUUAACGCCAGUAACCUGCGCUCUGCUGAUAAGUUUUUCCGCCCAUGCCGCUAACGCC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0052402;0.9291058;ygjK;947596;alpha-glucosidase
b2823;42;60;42;48;6.85;RyhB;40;58;52;58;3.21;-14.06;-24.12;-1.47837;GGAGGUAAUGUUGGCGAUG&CAUUGCUCACAUUGCUUCC;(((((((((((..((((((&))))))..)))))))))));CGAAGUCAUUGAUGGAAACAUUGUUUUUUCGCCACGCGGCUGGAGCGAUUUUUGUCCGCUGAAAGAGAGGGCGUUAUGUCAGCUUCCCUGAAGAAUCAACAAGGCUUUAGCCUGCCGGAGGUAAUGUUGGCGAUGGUGUUGAUGGUGAUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0052703;0.9291058;ppdC;945797;putative prepilin peptidase-dependent protein
b0968;-11;6;-2;5;3.42;RyhB;37;58;38;44;3.22;-13.79;-20.43;-1.44998;GGAGAGCAGCAAUGUCG&CGACAUUGCUCACAUUGCUUCC;(((.(((((((((((((&)))))))))......)))))));GCAAAGAAAUGGGCGUCAUUGUCCGGAGUUUUCCAUGGAUUUGCAACGCGUCCAUUAAGGAUAAGGAGAGCAGCAAUGUCGAAAGUCUGCAUAAUUGCCUGGGUUUACGGGCGAGUUCAGGGCGUAGGAUUUCGCUACACCACACAGUAC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0061458;0.9291058;yccX;945304;weak acylphosphatase
b0528;57;74;58;64;3.72;RyhB;42;61;54;60;3.3;-13.77;-20.79;-1.44788;ACUGGAAGGCUGGAGCGA&UUGCUCACAUUGCUUCCAGU;((((((((..((((((((&)))))).))...))))))));CGAUGACGGUUGCCACGCUGAUUGAAAACACGCUACAGGCGUGCGUUGAAUAUCAUGAUCCACAGGAUGAGUAACAUGGCGACAUUUUCUUUAGGUAAACAUCCGCACGUUGAGCUGUGCGACUUGCUGAAACUGGAAGGCUGGAGCGAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0062158;0.9291058;ybcJ;945158;ribosome-associated protein putative RNA-binding protein
b3084;-35;-25;-32;-26;2.76;RyhB;37;47;38;44;1.15;-13.75;-17.66;-1.44578;GGGCAAUGUCG&CGACAUUGCUC;(((((((((((&)))))))))));CGAAAAAGAGAAAAAGGGUAUACUCACGCACCCUUUUCAGGGGCAAUGUCGAAAUUUUAUCAUUCAGGAGGGCCGAUGAGCCACUUAGACAACGGUUUCCGUUCACUGACACUACAACGUUUUCCGGCGACGGAUGACGUUAACCCGCUA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0062866;0.9291058;rlmG;947589;23S rRNA m(2)G1835 methyltransferase SAM-dependent
b4532;-9;18;-5;2;7.78;RyhB;38;58;48;54;3.21;-13.67;-24.66;-1.43737;GGAGGCGAUGUGAAACAAAGCGAGUUC&GACAUUGCUCACAUUGCUUCC;(((((((((((((......((((..((&))..)))))))))))))))));AUUUUCGAGCAAAUUACACACGGAGGUAAACACUAAUGUUUACUUUGUUGAUAUACUCAGCGGCAGGGAGGCGAUGUGAAACAAAGCGAGUUCAGACGUUGGCUCGAAUCUCAGGGCGUCGAUGUAGCGAAUGGCAGCAACCAUUUGAAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0065776;0.9291058;hicA;945989;mRNA interferase toxin of the HicAB toxin-antitoxin system
b3110;57;75;57;63;2.99;RyhB;44;62;56;62;3.3;-13.55;-19.84;-1.42475;UGCUGGAAUGAGUGAGAGC&GCUCACAUUGCUUCCAGUA;((((((((..((((.((((&)))).))))..))))))));AAACGUAGACCGCAUAUCGCCUUGAUGCGGCUCGGAAAAAAAUAAUAAGCCCUACAAAAUAUUGAGCGAGAAAUUAUGGAAAUUGCAUCGAAUAAAGGCGUCAUUGCAGACGCUUCGACCCCGGCGGGUCGUGCUGGAAUGAGUGAGAGC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0070381;0.9291058;yhaO;947628;putative transporter
b4469;-11;12;-10;-4;5.61;RyhB;38;60;53;59;3.3;-13.54;-22.45;-1.4237;CUGGAAGCAAAAUGAGCUCUAUC&GACAUUGCUCACAUUGCUUCCAG;((((((((((...((((....((&))....))))...))))))))));ACCUUUCGAUUUCUCUUUCGUUCCGGCUUAUAAUCCCCGGCCUUUGAUUAUUUUUUUAUCAUUUCUGGAAGCAAAAUGAGCUCUAUCUCCCUGAUCCAACCGGAUCGCGACCUGUUCUCCUGGCCGCAGUACUGGGCCGCCUGUUUUGGA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0070778;0.9291058;ygiQ;948963;Radical SAM superfamily protein
b1107;-41;18;-41;-35;17.57;RyhB;37;81;75;81;14.89;-13.54;-46;-1.4237;CACCUGGCGGCAGCUAUUAAUAAAACAAUAAGGAGAGCAGUGUGGGUCCAGUAAUGUUG&CGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUG;((((((((....((((.(((((.........(((.(((((((((.....((((((((((&))))))))))))))))))))))..)))))..))))..))))))));CCGGCGAUCAACAAUUUAUCAGGCUGGCCGAUGACACCUGGCGGCAGCUAUUAAUAAAACAAUAAGGAGAGCAGUGUGGGUCCAGUAAUGUUGGAUGUCGAAGGUUACGAACUGGACGCGGAAGAGCGUGAAAUACUGGCGCAUCCGCUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0070778;0.9291058;nagZ;945671;beta N-acetyl-glucosaminidase
b4176;18;67;41;47;18.12;RyhB;31;86;56;62;18.89;-13.5;-50.51;-1.41949;GCUGGCGCUUGCCCUGGUUUUGGUACUGGAAGGUUUAGGGCCGAUGCUUU&AAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGC;(((((((((((..((((((.((((((((((((.....((((((.((((((&)))))))).....))))......))))))))))))...)))))).)))))))))));GACUGCGGUACAGGUCAAUAAAGCCACCGCAUCCUCAGGGAUGUCGGUGGUUUUCUUUUUCUAUAAGGAUAAUGAAUGAAUUCGACAAUCUGGCUGGCGCUUGCCCUGGUUUUGGUACUGGAAGGUUUAGGGCCGAUGCUUUACCCGAAG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0072388;0.9291058;yjeT;948696;DUF2065 family protein
b2830;62;74;68;74;1.12;RyhB;44;56;44;50;3.2;-13.5;-17.82;-1.41949;AGGUAAUGUGGGC&GCUCACAUUGCUU;(((((((((((((&)))))))))))));GCAGAGAGUGGUUUACCGUCUUCCUGGAGUAUGAAACAAUCAUUCGUAUAUAAAGCUUUAUUUUGAGGUAGUCCGGUGAUUGAUGACGAUGGCUACCGCCCAAACGUAGGUAUCGUGAUUUGUAAUCGCCAGGGGCAGGUAAUGUGGGCC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0072388;0.9291058;rppH;947300;RNA pyrophosphohydrolase
b1430;63;74;68;74;3.35;RyhB;53;64;53;59;2.88;-13.44;-19.67;-1.41318;AGUACUGGAAGC&GCUUCCAGUAUU;((((((((((((&))))))))))));UUUUGCGCUUCUGAUGCAGGGAAAAUUGUUAGUCAGAACCGAGCGCGCCGUUUUAAUGAAAGCAGAGGACAAAGAAUGAUCAUUCGUGACGAAAACUAUUUUACUGAUAAAUAUGAAUUAACCCGCACACACUCUGAAGUACUGGAAGCG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0074869;0.9291058;tehB;945979;tellurite selenium methyltransferase SAM-dependent tellurite selenium resistance protein
b2563;-20;16;-16;-10;9.76;RyhB;25;63;53;59;7.98;-13.42;-31.16;-1.41108;AUGCUGGAAGCGCGUGGCUAAUGGCAAUAUUAGGUU&AACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAU;(((((((((((..(((((.((((......(((((((&)))))))........)))))).)))...)))))))))));UGGUCGUGCAGUGAUGACCGGACUGAAAGAUGCGGUGGCAGAAAUGAAGCGUCUGAUGCUGGAAGCGCGUGGCUAAUGGCAAUAUUAGGUUUAGGCACGGAUAUUGUGGAGAUCGCUCGCAUCGAAGCGGUGAUCGCCCGAUCCGGUGAU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0075713;0.9291058;acpS;947037;holo-[acyl-carrier-protein] synthase 1
b3991;-75;-66;-75;-69;2.89;RyhB;40;49;43;49;1.15;-13.4;-17.44;-1.40898;GUGAGCAGUG&CAUUGCUCAC;((((((((((&))))))))));GUGAGCAGUGGGCGCAACAUAUCGUGCAGGAUGGCGACCAGAUCCUGCUUUUUCAGGUUAUUGCAGGGGGUUGAAAUGUUACGUAUUGCGGACAAAACGUUUGAUUCACAUCUGUUUACCGGCACAGGGAAAUUCGCUUCUUCACAACUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0076567;0.9291058;thiG;948493;thiamine biosynthesis ThiGH complex subunit
b2789;55;75;55;61;3.43;RyhB;37;62;56;62;3.3;-13.26;-19.99;-1.39426;UACUGGAUAGUGGUGAUGUUG&CGACAUUGCUCACAUUGCUUCCAGUA;(((((((..((((((((((((&))))))))).)))......)))))));ACGUCACCUCUGAUUUCCUGGCGAUGUCGCAGUCCAGAGUGAGCGUGGCUAACGCGAAUUUUCAGGAGUGCAACAAUGAGUUCUUUAAGUCAGGCUGCGAGCAGUGUGGAAAAACGCACAAAUGCUCGUUACUGGAUAGUGGUGAUGUUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0082802;0.9291058;gudP;947265;putative D-glucarate transporter
b3607;-11;7;-2;5;4.66;RyhB;36;59;38;44;3.29;-13.23;-21.18;-1.3911;UGGAGUAAGCAAUGUCGU&ACGACAUUGCUCACAUUGCUUCCA;((((((((((((((((((&))))))))))).....))).))));AGGGAACCUUUGUUACCGCUAUGACCCGGCCCGCGCAGAACGGGCCGGUCAUUAUCUCAUCGUGUGGAGUAAGCAAUGUCGUGUGAAGAACUGGAAAUUGUCUGGAACAAUAUUAAAGCCGAAGCCAGAACGCUGGCGGACUGUGAGCCA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0084199;0.9291058;cysE;948126;serine acetyltransferase
b1227;47;67;54;60;12.39;RyhB;2;22;9;15;7.55;-13.21;-33.15;-1.389;CCGGGGCGGUCUUCCUGAUUG&CGAUCAGGAAGACCCUCGCGG;((((((.((((((((((((((&))))))))))))))))).)));CACUGCGCAUCAGCGUCGCUUUGCCGGUGCCGUCGCGCCGCAAUAUCUGAAUAUCACCACCGGAGGACAGCACUAAUGCAAUUCCUGAAUAUGUUCUUCUUUGAUAUCUACCCGUACAUAGCCGGGGCGGUCUUCCUGAUUGGUAGCUGG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0085143;0.9291058;narI;945808;nitrate reductase 1 gamma (cytochrome b(NR)) subunit
b0613;-18;6;-17;-11;11.25;RyhB;37;59;52;58;3.29;-13.15;-27.69;-1.38269;UGGAGGCACUGCUGAACGAUGUCG&CGACAUUGCUCACAUUGCUUCCA;((((((((.((.(((.((((((((&)))))))).))))).))))))));GCGCAGCCGUCUGCGCGCGUGGAAAAACCCAUCAACUGACCGAUUUACUCAACCGCAUGGAGGCACUGCUGAACGAUGUCGAUGCCUGCAACGUCAACUAAAACCACAAAGCUUGCGACGUCAUUAAUCGAUGAGUACGCCCUGCUGGGC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0088035;0.9291058;citG;946395;2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
b1423;9;56;50;56;11.6;RyhB;38;84;38;44;14.89;-13.15;-39.64;-1.38269;CAGCAUCACGGCGGAUGAGAUUCGGGAACAGUUUUCGCAGGCAAUGUC&GACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUG;(((((((.((((((.((((.....((((((((........((((((((&))))))))....)))).)))).......)))).)).)))))))))));AGUUUGUAAAUUCUUCCCGCAAGAGUGAAUGCGGUUACCUACACUCCAGAUUACUGACCACUGGAGGCAGACACUAUGGCGAACAGCAUCACGGCGGAUGAGAUUCGGGAACAGUUUUCGCAGGCAAUGUCAGCCAUGUACCAGCAAGAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0088035;0.9291058;ydcJ;945991;putative metalloenzyme
b2799;-75;-65;-71;-65;1.36;RyhB;56;66;56;62;2;-13.09;-16.45;-1.37638;GUAGUGCUGGA&UCCAGUAUUAC;(((((((((((&)))))))))));GUAGUGCUGGAGAAAUUCAAAACCUAUGGGUUACGAAUUGAAGAGUAAUUUCGUAAAGCAACAAGGAGAAGGAUGAUGGCUAACAGAAUGAUUCUGAACGAAACGGCAUGGUUUGGUCGGGGUGCUGUUGGGGCUUUAACCGAUGAGGUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0091019;0.9291058;fucO;947273;L-12-propanediol oxidoreductase
b4355;-74;-65;-73;-67;2.24;RyhB;16;25;18;24;4.34;-13.09;-19.67;-1.37638;UCUCCGCGGG&CUCGCGGAGA;((((((((((&))))))))));AUCUCCGCGGGAUAUUCAUAAAGUUUUUCCUUUCCAGGCCGAAAAUCUUGCAUCGGUCCACAGGAAAGAGAAACCAUGUUAAAACGUAUCAAAAUUGUGACCAGCUUACUGCUGGUUUUGGCCGUUUUUGGCCUUUUACAACUGACAUCA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0091019;0.9291058;tsr;948884;methyl-accepting chemotaxis protein I serine sensor receptor
b3928;30;40;33;39;2.04;RyhB;51;61;52;58;2.88;-13.08;-18;-1.37533;ACUGGAAGCAA&UUGCUUCCAGU;(((((((((((&)))))))))));UCGUAUUUAUUAAGGCGUCACCGGUAAUCGGGACGAGGAUUUUUAUCCAUCAACGCCUUGCAAUUCAGGAGAGGUAUGACAAUGUCAUUAGAAGUGUUUGAGAAACUGGAAGCAAAAGUACAGCAGGCGAUUGAUACCAUCACUCUGUUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0091526;0.9291058;zapB;948420;FtsZ stabilizer septal ring assembly factor cell division stimulator
b2283;-15;-6;-13;-7;0.75;RyhB;52;61;53;59;2.88;-13.04;-16.67;-1.37112;ACUGGAAGCA&UGCUUCCAGU;((((((((((&))))))))));ACCUGCUGAAAGAGCGCUGGUAACCGAAUUUCGAUUAACGCUCAGUCUCUGACUGAGAAAACUGGAAGCAUGCUAAUGGCUACAAUUCAUGUAGACGGCAAAGAAUACGAGGUCAACGGAGCGGACAACCUGCUGGAAGCUUGUCUGUCU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0093579;0.9291058;nuoG;946762;NADH:ubiquinone oxidoreductase chain G
b0556;-10;11;1;7;5.95;RyhB;39;58;43;49;3.21;-12.89;-22.05;-1.35535;GGGGGCAACAGUGAGCAGAGU&ACAUUGCUCACAUUGCUUCC;((((((((..(((((((..((&))..))))))).))))))));CGCUGGCGGUAAGCAAUGGAAAGGCCUGAUGACUCGUCGUGAGAUUGAGCGUGAAGUCUGUUUGUGGGGGCAACAGUGAGCAGAGUAACCGCGAUUAUAUCCGCUCUGAUUAUCUGCAUCAUCGUCAGCCUGUCAUGGGCGGUCAAUCAU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0101674;0.9496255;rzpD;945929;DLP12 prophage putative murein endopeptidase
b2230;-27;3;-27;-21;8.92;RyhB;40;76;70;76;12.64;-12.71;-34.27;-1.33643;GGCUGGCUAUACACAAGGAAUGUGGCAAUG&CAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCC;((((((((((((...((.((((((((((((&)))))).)))))).))....)))).....))))))));UUUUGUCGUAUUAGGGCACGGUAAAGUUUGGCUGUGCCCGUAAAAAAUGGCUGGCUAUACACAAGGAAUGUGGCAAUGAGUGGUGAAAAAAAGGCGAAAGGCUGGCGGUUCUAUGGUCUUGUAGGUUUUGGCGCAAUAGCACUGCUUUCC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0112262;0.9496255;yfaA;946618;DUF2138 family protein putative host defense protein
b0896;51;69;52;58;3.7;RyhB;36;54;47;53;3.22;-12.7;-19.62;-1.33537;GCAAUGUGUAGCAGGUGGU&ACGACAUUGCUCACAUUGC;((((((((.((((.((.((&)).))..))))))))))));UGAUCAAACCCAAUGCCAAUAGCCGCCCGACCGGGGAUACCACUGGCUAUCUGGCAAACCCGAAGGAGGUGUGAGAUGGGAAGUGGAUGGCAUGAAUGGCCGCUGAUGAUCUUCACGGUCUUCGGGCAAUGUGUAGCAGGUGGUUUUAUC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.011288;0.9496255;dmsC;945502;dimethyl sulfoxide reductase anaerobic subunit C
b3248;19;35;29;35;5.01;RyhB;18;35;18;24;9.68;-12.53;-27.22;-1.3175;GCUUCCGGUUCUCCGCG&CGCGGAGAACCUGAAAGC;(((((.(((((((((((&))))))))))).)).)));UGGGGUGCUCUGGCCGUGGAUUUUCUUGCUGAUGCGCAAAGUCCGUCAGCAGUUUGCAGUGCAAUAAAGGUUUCUAUGACUUCUCUGUAUUUAGCUUCCGGUUCUCCGCGUCGUCAGGAGUUACUUGCGCAACUUGGCGUGACCUUUGAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0123886;0.9496255;yhdE;947753;dTTP/UTP pyrophosphatase m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase
b1044;63;73;66;72;2.88;RyhB;52;62;53;59;2.88;-12.49;-18.25;-1.31329;UGCUGGAAGCA&UGCUUCCAGUA;(((((((((((&)))))))))));GCUGCGAAUCAGCCAACCUGAAAGUAUGGAUAACACAACCCUCAAGGAUGACUAAUCAUUGAGGAAAUAGAAUAAAUGUUCAGACCUUUUUUAAACUCUCUUAUGCUCGGCAGUUUGUUUUUUCCUUUUAUUGCCAUUGCUGGAAGCACC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.012662;0.9496255;ymdA;949012;uncharacterized protein
b3219;-10;11;-9;-3;4.85;RyhB;39;59;52;58;3.27;-12.48;-20.6;-1.31224;UGGAGGCAAAAUGAACAAUGU&ACAUUGCUCACAUUGCUUCCA;(((((((((..((..((((((&))))))..))..)))))))));AGCUUUUAAGGAUGAAGGGGAACUAACCGACAUGACAGAUAUUACAGGCAAUCUGACGGUCCUGGUGGAGGCAAAAUGAACAAUGUAAAAUUACUGAUUGCCGGAAGUGCCUUUUUUGCCAUGUCAGCGCAAGCCGCUGAUAGAGUAUCA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0127312;0.9496255;yhcF;947735;putative transcriptional regulator
b4547;-4;42;8;14;11.38;RyhB;38;88;70;76;14.91;-12.44;-38.73;-1.30804;AAGCAUGGACUGGCUGGCUAAAUAUUGGUGGAUUCUGGUGAUUGUC&GACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUU;((((.....(((((((((((((((((((.......((((((.((((&)))))))).))........))))))))...)))))))))))......))));CUACUUGCCCGUAUGUAUCAACGUAUCAUGGAACAGCUCGUCGCCUGAUGAGUGGUUCUGCAAGAGGAAAUAAGCAUGGACUGGCUGGCUAAAUAUUGGUGGAUUCUGGUGAUUGUCUUUUUGGUAGGCGUCCUGCUGAACGUGAUUAAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0130116;0.9496255;ypfN;1450286;putative membrane protein UPF0370 family
b2819;20;33;23;29;4.07;RyhB;47;62;53;59;3.09;-12.43;-19.59;-1.30698;UACUGGAAGCUGUG&CACAUUGCUUCCAGUA;((((((((((((((&))))..))))))))));CACAACCCGACCCAACGCCGGGUUGAUUGCCCUGAUGGAUGAGAUGUUUGCCGGUAUGACCCUGGAGGAGGCGUAAUGAAAUUGCAAAAGCAAUUACUGGAAGCUGUGGAGCACAAACAGCUACGCCCGCUGGAUGUGCAAUUUGCCCUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0130826;0.9496255;recD;947287;exonuclease V (RecBCD complex) alpha chain
b4470;-72;-27;-34;-28;5.49;RyhB;4;61;5;11;14.12;-12.39;-32;-1.30278;ACUGGUUUGUUGCUGUGUGUUUCUCCGUUCCUGGCAUUUUCUUGAU&AUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGU;(((((..(((.((((((((((((((((.....((..((((((((((&)))))))))).))...)))))).......))))).)))..))..)))......)))));GUCACUGGUUUGUUGCUGUGUGUUUCUCCGUUCCUGGCAUUUUCUUGAUUUACCUGAAAUUUUAAGGUUUUUAAUAUGUUUGAUUCGACUUUAAAUCCGUUAUGGCAGCGUUACAUCCUCGCCGUUCAGGAGGAAGUAAAACCGGCGCUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0133704;0.9496255;yhaM;2847723;putative L-serine dehydratase alpha chain
b2820;2;13;3;9;3.01;RyhB;37;48;41;47;1.15;-12.36;-16.52;-1.29962;UGAGUGAUGUCG&CGACAUUGCUCA;((((((((((((&))))))))))));UACACCCUGAAGGCUGGAAAGUGUGGGAGAACGUCAGCGCGUUGCAGCAAACAAUGCCCCUGAUGAGUGAAAAGAAUGAGUGAUGUCGCCGAGACACUAGAUCCUUUGCGCUUGCCCUUACAGGGUGAGCGCCUGAUUGAAGCCUCUGCC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0135901;0.9496255;recB;947286;exonuclease V (RecBCD complex) beta subunit
b1784;-16;-2;-8;-2;3.44;RyhB;52;66;52;58;2.89;-12.31;-18.64;-1.29437;GUAGUACGGGGGGCA&UGCUUCCAGUAUUAC;(((((((.(((((((&))))))).)))))));CGACAGCGAACCGUGGGCCUGAGAAGCGGCAACACAGGCGUAGCAUACAGUUGGCAAAUGUAGUACGGGGGGCAUAUGACCUGGUUUAUUGACCGGCGUCUGAACGGCAAAAACAAAAGCAUGGUGAAUCGCCAGCGUUUUUUACGCCGU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0139638;0.9496255;yeaH;946296;UPF0229 family protein
b1778;-35;-24;-30;-24;2.52;RyhB;43;54;43;49;3.19;-12.27;-17.98;-1.29016;GUAAUGUGAGCA&UGCUCACAUUGC;((((((((((((&))))))))))));UUUUGCCAGUUGGUGUUAAUGUUUUGUUAGAAUCAGUCACGUAAUGUGAGCACGAUUAAAGUGAGAUGUGAGCAAAUGGCUAAUAAACCUUCGGCAGAAGAACUGAAAAAAAAUUUGUCCGAGAUGCAGUUUUACGUGACGCAGAAUCAU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0142698;0.9496255;msrB;947188;methionine sulfoxide reductase B
b1013;-75;-34;-47;-41;10.22;RyhB;7;44;14;20;13;-12.26;-35.48;-1.28911;CGAUGAGAGUGCAGAAGGUCGAGGCCGGGCGGGGGUUUUGCU&AGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUG;(((((...((((...((((.....((..(((((((((((.((&)).)))))))))))))...))))....))))..)))));CGAUGAGAGUGCAGAAGGUCGAGGCCGGGCGGGGGUUUUGCUAUCCUGUUGCCAAUCUACAAGAGGGGAGAGCGCAUGACGCAAGGCGCAGUGAAAACAACGGGUAAACGUUCGCGCGCAGUAAGCGCGAAGAAAAAAGCGAUUCUUAGC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0143473;0.9496255;rutR;945075;rut operon transcriptional repressor for
b1342;-10;11;-10;-4;7.12;RyhB;41;59;53;59;3.27;-12.25;-22.64;-1.28806;UGGAGGCACUGUGGAAGCGAU&AUUGCUCACAUUGCUUCCA;((((((((.((((..((((((&)))))))))).))))))));AAUGGGGUGAUGAGAUGUUGCGUAACAGGGCCAGAAGGCUAGACUACAAAAUAAUGCGUUGAUGAUGGAGGCACUGUGGAAGCGAUUAAGGGAUCGGACGUUAAUGUCCCGGAUGCAGUAUUUGCCUGGAUGCUGGAUGGUAGAGGCGGC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0144251;0.9496255;ydaN;945910;putative Zn(II) transporter
b4633;-42;-17;-32;-26;9.35;RyhB;37;66;49;55;3.3;-12.21;-24.86;-1.28385;GUAUUUGGGGAGCAAUGGCGAUGACG&CGACAUUGCUCACAUUGCUUCCAGUAUUAC;(((....((((((((((((((((.((&)).))))))...)))))))))).....)));AAAAUGGACGAGGCACUGGCUGAAAUUGGUUUUGUAUUUGGGGAGCAAUGGCGAUGACGCAUCCUCACGAUAAUAUCCGGGUACCUCACAACACGGCAAGCCUGCAUUGCGGCGCUUCAGUCUCCGCUGCAUACUGUCCAGGUGAGCGCG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0147406;0.9496255;xisD;5625559;pseudogene exisionase in defective prophage DLP12Phage or Prophage Related
b1224;-50;-41;-48;-42;1.47;RyhB;37;46;38;44;1.15;-12.19;-14.81;-1.28175;AGCAAUGUCG&CGACAUUGCU;((((((((((&))))))))));GAGCGUUACCUUGCCCUUAAACAUUAGCAAUGUCGAUUUAUCAGAGGGCCGACAGGCUCCCACAGGAGAAAACCGAUGAGUAAAUUCCUGGACCGGUUUCGCUACUUCAAACAGAAGGGUGAAACCUUUGCCGAUGGGCAUGGCCAGCUU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0149008;0.9496255;narG;945782;nitrate reductase 1 alpha subunit
b1156;-15;4;-14;-8;7.28;RyhB;1;21;14;20;7.15;-12.15;-26.58;-1.27754;CGUGAGGGCAGCCUGAUGC&GCGAUCAGGAAGACCCUCGCG;((((((((...((((((((&)).))))))....))))))));GGAUGGUUUAGGUGCCGCAGCCUCAGAAACGCGUCCGCGUAAUAUUGCAUUUAACUAUAUCGUGAGGGCAGCCUGAUGCAUAAAGCAAUAUUAAAUAGUGACCUUAUUGCAACAAAGGCAGGGGAUGUUACCGUUUAUAACUACGAUGGU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0152261;0.9496255;tfaE;945723;e14 prophage putative tail fiber assembly protein
b2120;43;58;48;54;10.52;RyhB;71;86;75;81;11.6;-12.11;-34.23;-1.27334;GCCUGCGCCCGGCUGG&CCAGCCGGGUGCUGGC;(((.((((((((((((&)))))))))))).)));GUGUCGCCACACAUAAAGAAGCUCACUGGCAGGCUUAUUAUCAAGCCCGCCACCGCCUGCCGUGAGGAAAGAUGCAUGAGCGAGCCGUUAAUUGUCGGCAUCCGGCAUCAUAGUCCGGCCUGCGCCCGGCUGGUGAAAUCGUUAAUCGAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0155581;0.9496255;yehM;946651;uncharacterized protein
b3543;-67;-48;-57;-51;2.65;RyhB;41;58;44;50;3.21;-12.11;-17.97;-1.27334;GGAAUUGAUUUGUGAGCAAU&AUUGCUCACAUUGCUUCC;((((......((((((((((&))))))))))....))));UAAGGGCGGGAAUUGAUUUGUGAGCAAUACAGACACGCAGUUCCAGGCUGCGGGUCACUAUAGAGAAUCCGGGUUAUGUUGCAGUUUAUUCUCCGACGUUUGGGACUCGUCAUCCCCACGUUUAUCGGUAUUACCCUUCUCACAUUUGCC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0155581;0.9496255;dppB;948063;dipeptide/heme ABC transporter permease
b0943;-22;6;-5;2;6.9;RyhB;37;60;41;47;3.3;-12.08;-22.28;-1.27018;CUGGUUUACCAGUGAAGGAGUGAUGUUG&CGACAUUGCUCACAUUGCUUCCAG;((((.....(((((...(((((((((((&))))))))))).)))))...))));CCACAAAGGCGGGAGCAACGGGCGGUAAUGCGACGGCGGUUCUCUAUUUUGAUCUGGUUUACCAGUGAAGGAGUGAUGUUGAAACGGAUAAUCUGGAUUCUGUUCUUAUUGGGAUUAACGUGGGGCUGUGAGCUAUUUGCCCAUGAUGGC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0158115;0.9496255;ycbV;945562;putative fimbrial-like adhesin protein
b2727;-7;4;-6;1;4.77;RyhB;39;49;42;48;1.15;-12.05;-17.97;-1.26703;GUGAGCGAUGU&ACAUUGCUCAC;(((((((((((&)))))))))));CAUGGUGACAUGCUGCAGAUUGUGGCAGACGACGGUUUACAGAUUCGGCGGAUAGAAAUAGACCAGGAGUGAGCGAUGUGUACAACAUGCGGUUGCGGUGAAGGCAACCUGUAUAUCGAGGGUGAUGAACAUAACCCUCAUUCCGCGUUU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0160688;0.9496255;hypB;947194;GTP hydrolase involved in nickel liganding into hydrogenases
b2253;-13;5;-2;5;4.92;RyhB;38;58;38;44;3.21;-12.03;-20.16;-1.26493;GGAAGGAAAAGCAAUGUC&GACAUUGCUCACAUUGCUUCC;(((((.((.(((((((((&)))))))))....)).)))));CAAAUGGCAAAAUAUACACAACACUCUUUAUAGCAAAUAUAAGUGGACAGGUAUUCAAUGGCGGAAGGAAAAGCAAUGUCAGAAUUUUUGCCUUUUUCGCGACCAGCAAUGGGCGUGGAGGAACUCGCUGCAGUUAAAGAGGUUCUCGAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0162426;0.9496255;arnB;947375;uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase PLP-dependent
b3902;43;75;61;67;8.05;RyhB;57;89;67;73;13.55;-11.97;-33.57;-1.25862;AAAGCCACCACCGACGCCUGGCUGAAAGGCUGG&CCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUU;(((((((.((((..((.((((((((((..((((&))))..))..)))))))).)))))).)))))));CGGAUGCGGCGCGAGCGCCUUAUCCGGCCUACGGGUCGUGCAUCCGACAACACCGAAUUUACAGGAACACAGAACAUGCAAAACAUUACUCAGUCCUGGUUUGUCCAGGGAAUGAUCAAAGCCACCACCGACGCCUGGCUGAAAGGCUGG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0167745;0.9496255;rhaD;948401;rhamnulose-1-phosphate aldolase
b3010;-68;-29;-35;-29;12.31;RyhB;38;86;38;44;14.91;-11.97;-39.19;-1.25862;GCCAGCGCCCUGGCUCUCAAUGCUCAUUUCUGCCAAUGUC&GACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGC;(((((((((((((((...((((((((.......(((((((&))))))).......)).....))))))....)))))...))))))))));UGUGAUCGCCAGCGCCCUGGCUCUCAAUGCUCAUUUCUGCCAAUGUCUUGCCUAUUUCUCCAGAGUGCUGGAGAAAUGCUACAAAAUUGCGCACAAUCAAAUUGCCGCAUUAUUCCUAAGAAAUUACGCGAUAUGAAACGUGAAGAGAUU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0167745;0.9496255;yqhC;947491;transcriptional activator of yqhD
b1269;-46;8;2;8;15.9;RyhB;42;90;42;48;14.91;-11.89;-42.7;-1.2502;AAAAGCAUAUCAGACGCCUGGGAAGGCGACACCAAAAGGAAGCUCUAUGAGCGA&UUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;((((((....(((.(((((((...(((..........((((((....(((((((&)))))))....))))))...........)))..))))))))))))))));CAGAUGUAAGUUCUGACUCACUGUUGCACAAAAGCAUAUCAGACGCCUGGGAAGGCGACACCAAAAGGAAGCUCUAUGAGCGAAAAGCUACAGAAAGUGCUGGCGCGUGCCGGCCACGGUUCUCGCCGUGAAAUCGAAUCUAUUAUUGAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0175092;0.9496255;rluB;945840;23S rRNA pseudouridine(2605) synthase
b3573;47;75;68;74;7.83;RyhB;37;66;38;44;3.3;-11.77;-22.9;-1.23759;GUACCUGUGAAGUGGCUUGCGCAGUGUCG&CGACAUUGCUCACAUUGCUUCCAGUAUUAC;(((.(((.((((.....((.(((((((((&))))))))).)).....)))))))...)));ACAUUUCCUUCGUUGGAUCAAAGCAGUAGGGACGCGCUCUCUGGCACUCUGCUGUUUUAGUGCAAAGGAGUGAUCAUGAACCGGUUUAUUAUUGCGGAUGCGACGAAAUGUAUCGGUUGCCGUACCUGUGAAGUGGCUUGCGCAGUGUCG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0186683;0.9496255;ysaA;948085;putative hydrogenase 4Fe-4S ferredoxin-type component
b0005;-18;50;44;50;14.7;RyhB;1;65;1;7;14.12;-11.73;-40.55;-1.23338;UGAUAAAAGGAGUAACCUGUGAAAAAGAUGCAAUCUAUCGUACUCGCACUUUCCCUGGUUCUGGUCGC&GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUA;(((((...(((((((..(((((.......(((((...((((.((..((.(((((..((((((((((((&))))))))))....))....)))))...))..)).)))).)))))))))))))))))...)))));GAAUAACAACCGCCGUUCUCAUCGAGUAAUCUCCGGAUAUCGACCCAUAACGGGCAAUGAUAAAAGGAGUAACCUGUGAAAAAGAUGCAAUCUAUCGUACUCGCACUUUCCCUGGUUCUGGUCGCUCCCAUGGCAGCACAGGCUGCGGAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0190705;0.9496255;yaaX;944747;DUF2502 family putative periplasmic protein
b0624;35;48;35;41;3.25;RyhB;53;66;60;66;2.88;-11.71;-17.84;-1.23128;GUGGUACGGGAAGC&GCUUCCAGUAUUAC;(((((((.((((((&)))))).)))))));GUCGUAAAAUUCGCCAACGACGAUUAUUCGGCGUUACACUUAUCACUCAUACAAAUCAAAUAGCAGGAUUUUGCAGUGUUACAACUUCUUUUAGCAGUUUUUAUUGGCGGUGGUACGGGAAGCGUGGCGAGAUGGCUGUUAAGUAUGCGA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0192746;0.9496255;flc;945798;fluoride efflux channel dual topology membrane protein
b1654;-12;7;-12;-6;4.57;RyhB;43;58;52;58;3.2;-11.69;-19.46;-1.22917;GGAAGCAAGACAAUGAGCA&UGCUCACAUUGCUUCC;((((((((.....((((((&))))))..))))))));UGUUAUUUUCCGAUGCCGCACUGACCCGCUACAAUGUCAGAUUACUGCCGUAAAGAAGUUUGAGGAAGCAAGACAAUGAGCACCACUAUCGAAAAAAUCCAACGCCAGAUUGCUGAAAACCCGAUCCUGCUGUACAUGAAAGGUUCACCG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0194808;0.9496255;grxD;946169;glutaredoxin-4
b2736;56;71;56;62;3.84;RyhB;38;59;53;59;3.27;-11.65;-18.76;-1.22497;UGGGAGCAGCACUGUC&GACAUUGCUCACAUUGCUUCCA;(((((((((((.((((&)))).))))......)))))));CACCAUACCGUUAUCUUCCAGCGCUUAUAUUCACAAUAUCAAACAAAAUAUCACUUAAAUUAACAAGGAGAGCAGAUGAAAACGGGAUCUGAGUUUCAUGUCGGUAUCGUUGGCUUAGGGUCAAUGGGAAUGGGAGCAGCACUGUCAUAU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0198994;0.9496255;ygbJ;947200;putative dehydrogenase
b2007;-72;-61;-71;-65;2.39;RyhB;37;48;41;47;1.15;-11.62;-15.16;-1.22181;UGAGUAAUGUUG&CGACAUUGCUCA;((((((((((((&))))))))))));CUAUGAGUAAUGUUGGCCCUAACGAAUAGCGGUUGCUUAAACGAAUCCGACUCUCACAUUAUCAGGGGUAUAAAAAUGGAAACUACCAAGCCUUCAUUCCAGGACGUACUGGAAUUUGUUCGUCUGUUCCGUCGUAAGAACAAACUGCAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0202189;0.9496255;yeeX;946541;UPF0265 family protein
b2264;43;51;44;50;0.81;RyhB;52;60;53;59;2.88;-11.61;-15.3;-1.22076;CUGGAAGCA&UGCUUCCAG;(((((((((&)))))))));CAUUACCGAUUCAUAUCAAUAAUCUAUUUUUGUAGCUCCUUAUACUUAGCCGCAAUAUUGAUACCGGACAAACUCAUGUCAGUAAGCGCAUUUAACCGACGCUGGGCGGCGGUCAUUCUGGAAGCAUUAACGCGUCACGGCGUCAGACAC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0203264;0.9496255;menD;946720;2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase SEPHCHC synthase
b4308;25;59;46;52;9.14;RyhB;53;90;60;66;14.49;-11.59;-35.22;-1.21866;AAAAGUGCAGCAUCUGGCAGCGUAAUGCAGGUAGC&GCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;(((((..(((((((((((.(((((((((.((..((&))..)).)))))))...))..))))))))))).)))));GAACUCCCAGCAAGACCCUGUAAAUAAUUCUGUGUAACUGCCCACGAUUAAAGGUGGCCGCUCAGGCGGUCACCGUAUUCGAUAAUAAAUGGGUCUGGAAAAAGUGCAGCAUCUGGCAGCGUAAUGCAGGUAGCCCAGUUCAACUCUCAC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0205432;0.9496255;yjhR;944740;pseudogene helicase family putative frameshift suppressor
b1189;10;30;13;19;8.06;RyhB;47;66;57;63;3.09;-11.54;-22.69;-1.2134;GUCAUACUGGGAAGUGGUGUG&CACAUUGCUUCCAGUAUUAC;((.(((((((.((((((((((&))))))))))))))))).));AAUAUUUUCAACUGAGUUAUCAAGAUGUGAUUAGAUUAUUAUUCUUUUACUGUAUCUACCGUUAUCGGAGUGGCUAUGCGAGUUGUCAUACUGGGAAGUGGUGUGGUAGGCGUUGCCAGCGCCUGGUACUUAAAUCAGGCAGGACAUGAG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0210945;0.9496255;dadA;945752;D-amino acid dehydrogenase
b2239;58;75;58;64;6.18;RyhB;37;58;52;58;3.22;-11.5;-20.9;-1.2092;GGAAGCAGUGCAAUGGCG&CGACAUUGCUCACAUUGCUUCC;(((((((((((((((.((&)).))))))....)))))))));UGUUGAUUGUUGUGAUGAUUGGCGAAAAACGUCGCCAUGAACAAUUACUGCAAGAACGCAACGGAGGCUAAUGGCAUGAAAUUGACGCUGAAAAACCUUAGCAUGGCGAUCAUGAUGAGCACUAUAGUCAUGGGAAGCAGUGCAAUGGCG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0215456;0.9496255;glpQ;946725;periplasmic glycerophosphodiester phosphodiesterase
b0156;-11;13;3;9;5.27;RyhB;37;59;41;47;3.29;-11.5;-20.06;-1.2092;UGGAGCAAAAUAUGAGUGAUGACG&CGACAUUGCUCACAUUGCUUCCA;((((((((....(((((((((.((&)).)))))))))..)))).))));UACCAGGGUAUUAGAUAAUGGCGAUUAUUAUUGGGUUAGAAUUUGCCCAAUUGCCGAUGUCGUUUGGAGCAAAAUAUGAGUGAUGACGUAGCACUGCCGCUGGAGUUUACCGACGCAGCAGCCAACAAAGUUAAAAGCCUGAUCGCUGAC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0215456;0.9496255;erpA;944857;iron-sulfur cluster insertion protein
b3391;-11;13;5;11;0.42;RyhB;46;68;49;55;3.24;-11.42;-15.08;-1.20079;AGGAGAUACAAAUGAAGCAAUGGA&UCACAUUGCUUCCAGUAUUACUU;(((..((((....(((((((((((&)).)))))))))..))))..)));CAGACGUACUAACGCUGGGUACCGGGACAAACUGCGAACCGCCACAAUGGUUGUGGCAACGGCAAGGAGAUACAAAUGAAGCAAUGGAUAGCCGCACUACUGUUGAUGCUGAUACCCGGCGUACAGGCGGCAAAGCCGCAAAAAGUGACG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0224751;0.9496255;hofQ;947901;DNA catabolic putative fimbrial transporter
b3777;15;47;35;41;9.19;RyhB;51;84;56;62;14.45;-11.41;-35.05;-1.19973;CAGCCCUAAGGUUGGUGAAAUACUGGAAUGCAA&UUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUG;((((((...(((((((((((((((((((.((((&))))))))))))))..))).)))))).)).))));CAUUAGACUUAGAAAAUAUCGGGUCGUAACGUUGUGUUAUUACUUUUUCAGAGUUUACUAAGGAGAGGUUUACUCGUGGCGAUUAAUUUCAGCCCUAAGGUUGGUGAAAUACUGGAAUGCAACUUUGGUAACUAUCCUGUUAGCCAAAAU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0225939;0.9496255;yifN;2847676;PemK toxin family pseudogene
b2211;-12;13;7;13;8.49;RyhB;6;30;6;12;10.22;-11.41;-30.12;-1.19973;CGGGUUUUCUGCAUGGAACUUCUUG&CAGGAAGACCCUCGCGGAGAACCUG;((((((((((((..((..(((((((&)))))))..))..))))))))))));AAAUAAGAAUUAUUAUUGCUGUGCGCGCGAAGAUGUUUAAACUGCGGGCUGUAAUUCAUUGUCCGGGUUUUCUGCAUGGAACUUCUUGUACUUGUCUGGCGGCAGUAUCGCUGGCCAUUUAUCAGUGUGAUGGCGCUAAGCCUCGCCAGU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0225939;0.9496255;yojI;946705;microcin J25 efflux ABC transporter permease/ATPase
b2155;-55;-41;-50;-44;3.08;RyhB;41;57;44;50;3.2;-11.36;-17.64;-1.19448;GAAGAUGUGAGCGAU&AUUGCUCACAUUGCUUC;(((((((((((((((&)))))))))))..))));CGUACGCAAGGGGACGUGAAGAAGAUGUGAGCGAUAACCCAUUUUAUUUUCGUAGUUACCUCAUGGAGAUAUGGAAUGUUUAGGUUGAACCCUUUCGUACGGGUCGGGCUGUGUUUGUCCGCUAUUUCUUGUGCAUGGCCUGUGUUAGCG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0231967;0.9496255;cirA;949042;colicin IA outer membrane receptor and translocator ferric iron-catecholate transporter
b3835;-35;-4;-23;-17;9.16;RyhB;53;86;71;77;14.49;-11.36;-35.01;-1.19448;GCCCUGACCAAACGGCUGGAAAAACUGGAGGC&GCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGC;(((...(((...(((((((..(((((((((((&))))))))).....))..))))))))))...)));GUUUGCGGAAGAGACGGCUGCCGUCGAGCGUGCUGUUGAUGCCCUGACCAAACGGCUGGAAAAACUGGAGGCUAAAUGACGCCAGGUGAAGUACGGCGCCUAUAUUUCAUCAUUCGCACUUUUUUAAGCUACGGACUUGAUGAACUGAUC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0231967;0.9496255;ubiB;948322;regulator of octaprenylphenol hydroxylation ubiquinone synthesis regulator of 2'-N-acetyltransferase putative ABC1 family protein kinase
b3311;-68;-41;-49;-43;11.36;RyhB;37;60;39;45;3.3;-11.34;-26;-1.19237;CUGUUGAAGCAAGUGCGUCGCGAUGUCG&CGACAUUGCUCACAUUGCUUCCAG;(((..((((((((((....(((((((((&))))))))).))).))))))))));GUCUCACCUGUUGAAGCAAGUGCGUCGCGAUGUCGCACGCGUUAAGACUUUACUGAACGAGAAGGCGGGUGCGUAAUGACCGAUAAAAUCCGUACUCUGCAAGGUCGCGUUGUUAGCGACAAAAUGGAGAAAUCCAUUGUUGUUGCUAUC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0234421;0.9496255;rpsQ;947808;30S ribosomal subunit protein S17
b4516;-39;-2;-9;-3;8.43;RyhB;21;62;22;28;7.99;-11.31;-27.73;-1.18922;UACUGAUUUAGUGUAUGAUGGUGUUUUUGAGGUUCUCC&GGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUA;(((((....((((((((...(((((((..(((((((((&))))))))).)))))))..))).....))))).....)))));UUCAUCGCAUGGACAAUACGGGUGAUGCUGCCAACUUACUGAUUUAGUGUAUGAUGGUGUUUUUGAGGUUCUCCAGUGGCUUCUGUUUCUAUCAGCUGUCCCUCCUGUUCAGCUACUGACGGGGUGGUGCGUAACGGCAAAAGCACUGCC;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0238147;0.9496255;insA;1450250;IS1 repressor TnpA
b3645;-7;3;-7;-1;3.42;RyhB;40;49;43;49;1.15;-11.31;-15.88;-1.18922;GUGGGCAAUG&CAUUGCUCAC;((((((((((&))))))))));UGAGAUACUCACAACUGUAUAUAAAUACAGUUACAGAUUUACUUUCUUUGCAAUUGAUAUCACAUGGAGUGGGCAAUGAACGAACAUCAUCAACCUUUUGAAGAGAUAAAACUGAUUAAUGCAAACGGAGCAGAACAAUGGUCAGCAAGA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0238147;0.9496255;dinD;948153;DNA damage-inducible protein
b0892;-18;15;1;7;10.86;RyhB;37;66;43;49;3.3;-11.3;-25.46;-1.18817;GUAAGUAGAGGCACCUGAGUGAGCAAUCUGUCG&CGACAUUGCUCACAUUGCUUCCAGUAUUAC;((((...((((((.....(((((((((..((((&)))))))))))))..)))))).....))));UGGAUGCAGCGAAAUUUACCUUCACCCCGCCGCAAGGCGUCACGGUAGAUGAUCAACGUAAGUAGAGGCACCUGAGUGAGCAAUCUGUCGCUCGAUUUUUCGGAUAAUACUUUUCAACCUCUGGCCGCGCGUAUGCGGCCAGAAAAUUUA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0239401;0.9496255;rarA;945505;recombination intermediate processing DNA-dependent ATPase
b2525;55;73;56;62;6.49;RyhB;40;60;53;59;3.29;-11.22;-21;-1.17976;CUGGAAGCUAAUAGCGGUG&CAUUGCUCACAUUGCUUCCAG;((((((((....(((((((&)))))))......))))))));AGGAUUUCGCCGCUCGCCGCAUGGACCAGUCGGUUCGUCGUGCGCUGAAAGGCCAUUCCGUGGACGAGGUUUAAUAUGCCAAAGAUUGUUAUUUUGCCUCAUCAGGAUCUCUGCCCUGAUGGCGCUGUUCUGGAAGCUAAUAGCGGUGAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.024966;0.9496255;fdx;947160;[2Fe-2S] ferredoxin
b1991;-43;-22;-35;-29;7.02;RyhB;1;20;8;14;6.18;-11.2;-24.4;-1.17765;GUGAACUGGUCUUCCUGCUGGC&GCGAUCAGGAAGACCCUCGC;((((...((((((((((...((&))...)))))))))).))));GGGCGAUACGCUGGGAGCAGCCAUAGAGCUUGGUGAACUGGUCUUCCUGCUGGCACUGCUAUAAAGAGACGUGAGAUGCAAAUACUUGCCGAUUUACUGAAUACGAUCCCAGCCAUCGAUUCUACCGCUAUGUCGCGUGCACAACGGCAU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0252289;0.9496255;cobT;946517;nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
b2095;-73;-39;-73;-67;12.38;RyhB;14;49;43;49;10.32;-11.15;-33.85;-1.1724;GUGAGCAAAGUGAUUGCCGAUUGUGGCUGCGAGGG&CCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCAC;((((((((.((...(((.....((..(((((((((&)))))))))...))......)))..)).))))))));UGGUGAGCAAAGUGAUUGCCGAUUGUGGCUGCGAGGGCAGGGCAUAACGCACCUGCCAUUUAACAAGGAAAAAACAUGAAAACGUUAAUUGCCCGGCAUAAAGCUGGUGAACAUAUCGGCAUAUGUUCAGUCUGUUCUGCCCAUCCGUUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0258974;0.9496255;gatZ;946641;D-tagatose 16-bisphosphate aldolase 2 subunit
b2135;-9;27;21;27;15.71;RyhB;21;58;21;27;7.91;-11.14;-34.76;-1.17134;GGGGGCGGUAUGAGCCAUGUCUGGGGACUGUUUUCC&GGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCC;(((((((((.(((((.(((((((......(((((((&))))))).......)).))))).))))).)))))))));GGGCGAACAAAAAAUAAUCACAAGCUGACUUAUACUUGAACUGUCAGGUUCAUGAACUCACAACAAGGGGGCGGUAUGAGCCAUGUCUGGGGACUGUUUUCCCAUCCCGAUCGUGAAAUGCAGGUGAUUAAUCGCGAAAACGAAACGAUU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.026033;0.9496255;yohC;946666;Yip1 family inner membrane protein
b3668;52;75;53;59;2.92;RyhB;6;26;19;25;7.74;-11.13;-21.79;-1.17029;UUCUCUGCCGCAUGGUUUUGCCUG&CAGGAAGACCCUCGCGGAGAA;((((((((.....((((((.((((&))))))))))...))))))));UCGCGCCAAUCUGAUGGAAAAACUGGGCGUCAGUAACGACGUAGAGCUGGCGCGCCGCAUGUUUGAUGGCUGGUGAUGAAGACGUUGUUCUCCCGCUUAAUUACCGUUAUUGCCUGCUUUUUUAUCUUCUCUGCCGCAUGGUUUUGCCUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0261694;0.9496255;uhpB;948195;sensory histidine kinase in two-component regulatory sytem with UhpA
b2457;2;41;3;9;13.55;RyhB;1;59;52;58;14.1;-11.11;-38.76;-1.16819;UGGAAGCAUUAGGAAUGAUCGAAACCCGGGGCCUGGUUGC&GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCA;((((((((..((.((((.(((...((((((((((((((((&))))))))).....))))).))..............))))))).)).....))))))));GAACCGCGAAAGCAGUUUACAAACACUGGUUGAAUGAACGGUCCCGUUCUGGACCCUGAUAAAGAGGAAAGCACAAUGGAAGCAUUAGGAAUGAUCGAAACCCGGGGCCUGGUUGCACUGAUUGAGGCUUCUGACGCGAUGGUGAAAGCU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0264441;0.9496255;eutM;946942;ethanolamine utilization protein putative carboxysome structural protein
b4111;-16;-7;-14;-8;4.65;RyhB;15;24;16;22;4.34;-11.08;-20.07;-1.16503;CUCUGCGAGG&CCUCGCGGAG;((((((((((&))))))))));CCCGCUCCCCUUUUGCGGCCGUCGCGCUGAUUUUUCUGGCGUUUGCGGAAAUGGGCCAACUCUGCGAGGAAAGCUAUGCUGAAAAGGAAAAAAGUAAAACCGAUUACCCUUCGUGAUGUCACCAUUAUUGAUGACGGUAAACUGCGUAAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0268612;0.9496255;proP;948626;proline/glycine betaine transporter
b2550;-75;-66;-72;-66;1.49;RyhB;39;49;39;45;1.15;-11.07;-13.71;-1.16398;GUGGCAGUGU&ACAUUGCUCAC;((((((((((&))))))).)));GUGGCAGUGUAUUGAACAAUCUGGCAAUGUUUUCGCGGAAUAAUCACGCAAUUAACUAAACAAGGUUUAGUGAAGAUGAGAGCCUGCAUUAAUAAUCAACAGAUUCGCCACCAUAACAAAUGCGUGAUUCUGGAACUGCUGUACCGGCAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0270016;0.9496255;yphH;947023;putative DNA-binding transcriptional regulator
b1588;-19;-1;-10;-4;5.91;RyhB;40;56;43;49;3.21;-11.03;-20.15;-1.15978;AAGCAAUAAGUGAGUAAUG&CAUUGCUCACAUUGCUU;(((((((..((((((((((&)))))))))))))))));AUCGAAAAAAUAUAACCCACGACAACCAUAAAUUCUGGCAUGACAUUUUGUUUGAAAAGCAAUAAGUGAGUAAUGAUGAAAAUCCAUACCACAGAGGCGCUCAUGAAGGCUGAAAUCAGCCGUAGAAGUCUGAUGAAAACCUCCGCACUU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0275701;0.9496255;ynfF;945268;S- and N-oxide reductase A subunit periplasmic
b0032;-16;-1;-16;-10;5.23;RyhB;10;26;20;26;4.37;-11;-20.6;-1.15662;UUCUCUGGAGGGUGUU&AAGACCCUCGCGGAGAA;(((((((((((((.((&)).)))))).)))))));AGAUUUGCAUUGAUUUACGUCAUCAUUGUGAAUUAAUAUGCAAAUAAAGUGAGUGAAUAUUCUCUGGAGGGUGUUUUGAUUAAGUCAGCGCUAUUGGUUCUGGAAGACGGAACCCAGUUUCACGGUCGGGCCAUAGGGGCAACAGGUUCG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0280038;0.9496255;carA;949025;carbamoyl phosphate synthetase small subunit glutamine amidotransferase
b3365;-9;12;2;8;4.28;RyhB;38;57;42;48;3.21;-10.98;-18.47;-1.15452;GAGGCAAAAAUGAGCAAAGUC&GACAUUGCUCACAUUGCUUC;(((((((...(((((((..((&))..)))))))..)))))));AAUUUGAUUUACAUCAAUAAGCGGGGUUGCUGAAUCGUUAAGGUAGGCGGUAAUAGAAAAGAAAUCGAGGCAAAAAUGAGCAAAGUCAGACUCGCAAUUAUCGGUAACGGUAUGGUCGGCCAUCGCUUUAUCGAAGAUCUUCUUGAUAAA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0282964;0.9496255;nirB;947868;nitrite reductase large subunit NAD(P)H-binding
b0728;-74;-59;-66;-60;1.61;RyhB;50;64;51;57;2.98;-10.97;-15.56;-1.15347;AAUGCCCGGAAGCGAU&AUUGCUUCCAGUAUU;(((((..(((((((((&))))))))).)))));CAAUGCCCGGAAGCGAUACGAAAUAUUCGGUCUACGGUUUAAAAGAUAACGAUUACUGAAGGAUGGACAGAACACAUGAACUUACAUGAAUAUCAGGCAAAACAACUUUUUGCCCGCUAUGGCUUACCAGCACCGGUGGGUUAUGCCUGU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0284439;0.9496255;sucC;945312;succinyl-CoA synthetase beta subunit
b3492;-66;-42;-64;-58;5.23;RyhB;42;65;57;63;3.3;-10.96;-19.49;-1.15242;UGAUGCUGGUGCGACCACUGAGGAA&UUGCUCACAUUGCUUCCAGUAUUA;(((((((((.((((....((((.((&)).))))..))))..)))))))));UAGUAAUAUUGAUGCUGGUGCGACCACUGAGGAAUCUUUACAAUUCACGCCCGUUUUUUCUAAGAGGAGCGCAACGUGGAAAGGUUUGAUGCCAUUAUUAUAGGCGCUGGUGCGGCGGGUAUGUUCUGUUCUGCGCUGGCAGGUCAGGCA;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.028592;0.9496255;yhiN;947996;putative oxidoreductase
b0681;57;71;58;64;3.86;RyhB;32;46;39;45;5.54;-10.92;-20.32;-1.14821;AGCAAUGUCGGGCUU&AAGCACGACAUUGCU;((((((((((.((((&)))).))))))))));CGCUACUUUUUUAAUUUUUAUUUUUUCGCUGUUCACCUUUGGUGCAGCAAUUUAUACGUCAAAGAGGAUUAACCCAUGCGUACGUUUAGUGGCAAACGUAGUACGCUGGCGCUGGCUAUCGCCGGUGUUACAGCAAUGUCGGGCUUUAUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0291917;0.9496255;chiP;945296;chitoporin uptake of chitosugars
b2714;60;72;66;72;7.05;RyhB;26;38;26;32;5.77;-10.91;-23.73;-1.14716;CGUGCUUUCAGGU&ACCUGAAAGCACG;(((((((((((((&)))))))))))));UCCCGCCGAUUGUGCAAGGACAAUCGGCAAACGGUGCAGUACACUGCGUUGAUUGCGUGUAAAGGGAUGAAAAUGAUGACGACGAUGCUGGAAGUGGCGAAGCGCGCCGGGGUUUCAAAAGCGACCGUUUCCCGCGUGCUUUCAGGUAAU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0293435;0.9496255;ascG;947305;asc operon transcriptional repressor prpBC operon repressor
b3867;-13;5;-6;1;8.94;RyhB;38;58;43;49;3.21;-10.87;-23.02;-1.14295;GGAAGGAGUGAGCAUGUC&GACAUUGCUCACAUUGCUUCC;(((((..(((((((((((&)))).)))))))....)))));CAACCGGCUGAUGACCCGAAACGGGCAUCCGCCGGUACGCCGUAGCCGCCAGAGACGCCAUCGGAAGGAGUGAGCAUGUCUGUACAGCAAAUCGACUGGGAUCUGGCCCUGAUCCAGAAAUAUAACUAUUCCGGGCCACGAUACACCUCG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0299579;0.9496255;hemN;948362;coproporphyrinogen III oxidase SAM and NAD(P)H dependent oxygen-independent
b3032;-67;-43;-49;-43;8.96;RyhB;40;63;40;46;3.3;-10.86;-23.12;-1.1419;AUACUGUUUAGCACAUGGAGCGAUG&CAUUGCUCACAUUGCUUCCAGUAU;((((((...((((.(((((((((((&)))))))).)))))))..))))));UGGUUGCGAUACUGUUUAGCACAUGGAGCGAUGGCGAUUCCGGUUUAUUAGCGUCGUGAAACCUAAGGACACCAUUUGGAAAGCCUGUUAACCCUUCCUCUGGCUGGUGAGGCCAGAGUCAGGAUUUUACAAAUUACCGACACUCACCUG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0301134;0.9496255;cpdA;947515;3'5' cAMP phosphodiesterase
b4551;57;73;67;73;3.25;RyhB;39;58;39;45;3.21;-10.85;-17.31;-1.14085;GGAUUCAAUGGCGAUGU&ACAUUGCUCACAUUGCUUCC;(((..((((((((((((&)))))))...)))))..)));GAGAUUUUCCAGCGUGAAAUGCAACAAGAACGACGCCAGCUGGACGGCUGGGAUGAAUUUGAGUAGAGGGUAAAGAUGGCAAUCCGAAAACGUUUUAUUGCGGGCGCAAAAUGCCCGGCCUGUCAGGCGCAGGAUUCAAUGGCGAUGUGG;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0302697;0.9496255;yheV;1450290;DUF2387 family putative metal-binding protein
b4281;-9;2;-7;-1;2.98;RyhB;36;46;38;44;2;-10.82;-15.8;-1.1377;AGCAAUGUCGU&ACGACAUUGCU;(((((((((((&)))))))))));CCCACAUACUUCGGCGUAAUAUCCAUCGGGACAGCCCGGAUAGGCCCAAUGGUCAGCUCAUCGGCCAGCAAUGUCGUGAACUGUGAGACGAAACAGCGUACACAGUUUGAAUGUAUCUACUUUUCCCAAUACUGGGCGAAGGGAGAUUUU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0307429;0.9496255;yjhD;948809;pseudogene KpLE2 phage-like element
b1279;-12;4;-9;-3;7.4;RyhB;46;61;52;58;3.24;-10.81;-21.45;-1.13665;ACGGGAAGUAAUGUGA&UCACAUUGCUUCCAGU;((.(((((((((((((&))))))))))))).));AAAAUGGUACUUUAAAGGGCUAUUGCGGUAAGUUGACCAUAAUUUAUUCGCUCUAACCACAUAACGGGAAGUAAUGUGAAAUAUUUACUCAUUUUCUUACUGGUGUUAGCGAUCUUCGUGAUUUCGGUCACGUUGGGUGCGCAGAACGAU;GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU;0.0309022;0.9496255;yciS;944936;DUF1049 family inner membrane protein function unknown