#### metaMIR output #### # Run Parameters: # Max allowed cluster size: 15 # Minimum analyzed cluster: 5 # # Input list: YAP1, WWTR1, TP73, TEAD1, TEAD2, AJUBA, BMP2, BMP4, BMP7, BMPR1A, BMPR2, MYC, NOG, SMAD1, SMAD2, SMAD3, SMAD4, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TGFBR3, NF1, NF2, PTEN, TP53, CHD5, FOXD3 # Core of genes tracked: YAP1, WWTR1, TP73, TEAD1, TEAD2, AJUBA # Genes for positive interaction: YAP1, WWTR1, TP73, TEAD1, TEAD2, AJUBA, BMP2, BMP4, BMP7, BMPR1A, BMPR2, MYC, NOG, SMAD1, SMAD2, SMAD3, SMAD4, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TGFBR3 # Genes for negative interaction: NF1, NF2, PTEN, TP53, CHD5, FOXD3 # # Elapsed time: 1.18 min # # Analyzed gene lists: ## # Positive list(s) # L01: AJUBA, BMP2, BMPR1A, BMPR2, SMAD2, SMAD3, SMAD4, TEAD1, TGFB2, TGFBR1, TGFBR2, TGFBR3, TP73, WWTR1, YAP1 # L02: AJUBA, BMP2, BMP7, BMPR1A, BMPR2, SMAD2, SMAD3, SMAD4, TEAD1, TGFB2, TGFBR1, TGFBR2, TGFBR3, WWTR1, YAP1 # L03: BMP2, BMP4, BMPR1A, BMPR2, SMAD2, SMAD3, SMAD4, TEAD1, TGFB2, TGFBR1, TGFBR2, TGFBR3, TP73, WWTR1, YAP1 # L04: AJUBA, BMP2, BMP7, BMPR1A, BMPR2, SMAD2, SMAD3, SMAD4, TEAD1, TGFBR1, TGFBR2, TGFBR3, TP73, WWTR1, YAP1 # L05: AJUBA, BMP2, BMPR1A, BMPR2, MYC, SMAD2, SMAD3, SMAD4, TEAD1, TGFB2, TGFBR1, TGFBR2, TGFBR3, WWTR1, YAP1 # L06: BMP2, BMP7, BMPR1A, BMPR2, NOG, SMAD2, SMAD3, SMAD4, TEAD1, TGFB2, TGFBR1, TGFBR2, TGFBR3, WWTR1, YAP1 # L07: AJUBA, BMP2, BMPR1A, BMPR2, SMAD1, SMAD2, SMAD3, SMAD4, TEAD1, TGFB2, TGFBR1, TGFBR2, TGFBR3, WWTR1, YAP1 # L08: AJUBA, BMP7, BMPR1A, BMPR2, SMAD2, SMAD3, SMAD4, TEAD1, TEAD2, TGFB2, TGFBR1, TGFBR2, TGFBR3, TP73, WWTR1 # L09: AJUBA, BMPR1A, BMPR2, SMAD2, SMAD3, SMAD4, TEAD1, TGFB1, TGFB2, TGFBR1, TGFBR2, TGFBR3, TP73, WWTR1, YAP1 # L10: AJUBA, BMP2, BMPR1A, BMPR2, SMAD2, SMAD3, SMAD4, TEAD1, TGFB2, TGFB3, TGFBR1, TGFBR2, TGFBR3, TP73, WWTR1 # # Negative list(s) # L01: NF1, NF2, PTEN, TP53, CHD5, FOXD3