# STOCKHOLM 1.0
#=GF CC Generated by LocARNA 1.9.1
#=GF SQ 4

ACA7               ACCUCCUGGGAUCGCAUCUGG-A--GAGUGCCUA-----GUAUUCUGCCAGCUUCGGAAAGGGAGGGAAAGCAA--GCCUGGCAGAGGCACCCAUU--CCAUUCCCAGCUUGCUCCGUAG
ACA5               UGCAGCC-GUGUCAAAUUCAGUA--CCUGUCCUAUGCAUGGUAGGCACUGGCCCAG--AAGGCUGCCACAGAAA----CACUGUGACUCAUGGGCC--CUGUUCCUGUGUC---------
ACA30              UGGCACU-----UUCACAGUUCC--UUCCCCAGGCAGUGGGGCCAGGAUUUGGUAGCU--GGUGCUGAGAGAAA--ACCCUUGAUUGUAU-----U--CUUGCCCUGGGAUUAU-----A
ACA59              GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCC------CAGCUGGCCCAUGGGUGACCCUGGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAU-----GUAG
#=GC cA1           ...................................................................AAAAAA...............................................
#=GC cA2           ...................................................................123456...............................................
#=GC SS_cons       .((((((.....((...((((((..((((((........))))))))))))...))....))))))..............(((((((.......((..((((((((((............

ACA7               CUGGCGAUUGGAAGAC-A-----CUCU-GCG-------ACA
ACA5               CCAG-GCUCAGGGAUA-AAUUUGGUUA-CAG-------ACA
ACA30              CCAGUGGCAA---------CUGUCACU-CAA---UGGGACA
ACA59              UGAG-GGUAACAAUACUUACUCUCGUUGGUGAUAAGGAACA
#=GC cA1           ......................................BBB
#=GC cA2           ......................................123
#=GC SS_cons       )))).))))))))..........)))).)))..........
//