71 |
0.006638 |
0.3087 |
b3857 |
mobA |
-12.61 |
0.042607 |
253 -- 264 |
7 -- 18 |
molybdopterin-guanine dinucleotide synthase |
|
_____________252__________265\n_____________|____________|\n5'-UCC...AGCCA________G___GCGUA...AAC-3'\n______________GACGAAUG_GCG\n______________:||:||||_|||\n______________UUGUUUAC_CGC\n3'-UUU...UACUA________G___AGAAAG-5'\n_____________|____________|\n_____________19___________6\n |
254 -- 260 |
11 -- 17 |
-15.9619 kcal/mol |
2.14186 kcal/mol |
1.20891 kcal/mol |
252 265@LB@ | |@LB@5'-UCC...AGCCA G GCGUA...AAC-3'@LB@ GACGAAUG GCG@LB@ :||:|||| |||@LB@ UUGUUUAC CGC@LB@3'-UUU...UACUA G AGAAAG-5'@LB@ | |@LB@ 19 6@LB@@LB@@LB@Energy -12.61 kcal/mol@LB@Hybridization Energy -15.9619 kcal/mol@LB@Unfolding Energy - mRNA 2.14186 kcal/mol@LB@Unfolding Energy - sRNA 1.20891 kcal/mol@LB@@LB@Position - mRNA 253 -- 264@LB@Position - sRNA 7 -- 18@LB@Position Seed - mRNA 254 -- 260@LB@Position Seed - sRNA 11 -- 17@LB@ |
72 |
0.006739 |
0.3087 |
b2520 |
yfhM |
-8.19 |
0.237735 |
190 -- 217 |
6 -- 30 |
bacterial alpha2-macroglobulin colonization factor ECAM; anti-host protease defense factor; periplasmic inner membrane-anchored lipoprotein |
|
_____________189__________________________218\n_____________|____________________________|\n5'-CUC...GUGGC________AAA____AA____UA_____AGCCG...CUU-3'\n______________AGGGAUGA___AUGA__AAGU__CGCGU\n______________||||||||___||:|__||:|__|||||\n______________UCCCUACU___UAUU__UUUA__GCGCA\n3'-UUU...UUAAG________AC_____G_____C______GAAAG-5'\n_____________|____________________________|\n_____________31___________________________5\n |
191 -- 197 |
23 -- 29 |
-19.496 kcal/mol |
3.87755 kcal/mol |
7.4255 kcal/mol |
189 218@LB@ | |@LB@5'-CUC...GUGGC AAA AA UA AGCCG...CUU-3'@LB@ AGGGAUGA AUGA AAGU CGCGU@LB@ |||||||| ||:| ||:| |||||@LB@ UCCCUACU UAUU UUUA GCGCA@LB@3'-UUU...UUAAG AC G C GAAAG-5'@LB@ | |@LB@ 31 5@LB@@LB@@LB@Energy -8.19 kcal/mol@LB@Hybridization Energy -19.496 kcal/mol@LB@Unfolding Energy - mRNA 3.87755 kcal/mol@LB@Unfolding Energy - sRNA 7.4255 kcal/mol@LB@@LB@Position - mRNA 190 -- 217@LB@Position - sRNA 6 -- 30@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 23 -- 29@LB@ |
73 |
0.006809 |
0.3087 |
b4146 |
epmB |
-12.79 |
0.039583 |
278 -- 298 |
1 -- 22 |
EF-P-Lys34 lysylation protein; weak lysine 2 3-aminomutase |
|
_____________277____________________299\n_____________|______________________|\n5'-UUC...GAUCC______ACUUC___________GA-3'\n______________UGAUGA______UGCGUCUUUU\n______________||||:|______:||||||||:\n______________ACUAUU______GCGCAGAAAG\n3'-UUU...CUACU______GUUUAC__________-5'\n_____________|_____________________|\n_____________23____________________1\n |
292 -- 298 |
1 -- 7 |
-16.8007 kcal/mol |
2.75078 kcal/mol |
1.25963 kcal/mol |
277 299@LB@ | |@LB@5'-UUC...GAUCC ACUUC GA-3'@LB@ UGAUGA UGCGUCUUUU@LB@ ||||:| :||||||||:@LB@ ACUAUU GCGCAGAAAG@LB@3'-UUU...CUACU GUUUAC -5'@LB@ | |@LB@ 23 1@LB@@LB@@LB@Energy -12.79 kcal/mol@LB@Hybridization Energy -16.8007 kcal/mol@LB@Unfolding Energy - mRNA 2.75078 kcal/mol@LB@Unfolding Energy - sRNA 1.25963 kcal/mol@LB@@LB@Position - mRNA 278 -- 298@LB@Position - sRNA 1 -- 22@LB@Position Seed - mRNA 292 -- 298@LB@Position Seed - sRNA 1 -- 7@LB@ |
74 |
0.006875 |
0.3087 |
b2474 |
tmcA |
-10.30 |
0.108021 |
196 -- 222 |
5 -- 31 |
elongator methionine tRNA (ac4C34) acetyltransferase |
|
_____________195____________________________223\n_____________|______________________________|\n5'-GAU...CGGGG_________C___AC____________U__ACACA...UUG-3'\n______________CAGGGAUGG_UGA__UGAC___UGCGC_UC\n______________||||||||:_|||__|:||___|||||_||\n______________GUCCCUACU_ACU__AUUG___ACGCG_AG\n3'-UUU...CUUAA___________________UUU_____C__AAAG-5'\n_____________|______________________________|\n_____________32_____________________________4\n |
198 -- 204 |
23 -- 29 |
-27.934 kcal/mol |
9.88036 kcal/mol |
7.7585 kcal/mol |
195 223@LB@ | |@LB@5'-GAU...CGGGG C AC U ACACA...UUG-3'@LB@ CAGGGAUGG UGA UGAC UGCGC UC@LB@ ||||||||: ||| |:|| ||||| ||@LB@ GUCCCUACU ACU AUUG ACGCG AG@LB@3'-UUU...CUUAA UUU C AAAG-5'@LB@ | |@LB@ 32 4@LB@@LB@@LB@Energy -10.30 kcal/mol@LB@Hybridization Energy -27.934 kcal/mol@LB@Unfolding Energy - mRNA 9.88036 kcal/mol@LB@Unfolding Energy - sRNA 7.7585 kcal/mol@LB@@LB@Position - mRNA 196 -- 222@LB@Position - sRNA 5 -- 31@LB@Position Seed - mRNA 198 -- 204@LB@Position Seed - sRNA 23 -- 29@LB@ |
75 |
0.006972 |
0.3087 |
b4348 |
hsdS |
-13.63 |
0.027959 |
190 -- 211 |
7 -- 29 |
specificity determinant for hsdM and hsdR |
|
_____________189_____________________212\n_____________|_______________________|\n5'-CUG...UUGGU_______A_____________G_GAAAU...UAA-3'\n______________GGGGUGA_GG_AAUGAGUGCG_G\n______________|||:|||_|:_||::|:||||_|\n______________CCCUACU_CU_UUGUUUACGC_C\n3'-UUU...UAAGU_______A__A__________G_AGAAAG-5'\n_____________|_______________________|\n_____________30______________________6\n |
203 -- 209 |
9 -- 15 |
-24.9713 kcal/mol |
3.9222 kcal/mol |
7.41901 kcal/mol |
189 212@LB@ | |@LB@5'-CUG...UUGGU A G GAAAU...UAA-3'@LB@ GGGGUGA GG AAUGAGUGCG G@LB@ |||:||| |: ||::|:|||| |@LB@ CCCUACU CU UUGUUUACGC C@LB@3'-UUU...UAAGU A A G AGAAAG-5'@LB@ | |@LB@ 30 6@LB@@LB@@LB@Energy -13.63 kcal/mol@LB@Hybridization Energy -24.9713 kcal/mol@LB@Unfolding Energy - mRNA 3.9222 kcal/mol@LB@Unfolding Energy - sRNA 7.41901 kcal/mol@LB@@LB@Position - mRNA 190 -- 211@LB@Position - sRNA 7 -- 29@LB@Position Seed - mRNA 203 -- 209@LB@Position Seed - sRNA 9 -- 15@LB@ |
76 |
0.007084 |
0.3087 |
b4214 |
cysQ |
-5.34 |
0.578728 |
11 -- 17 |
26 -- 32 |
3'(2') 5'-bisphosphate nucleotidase |
|
_____________10______18\n_____________|_______|\n5'-AAC...AAUCA_______CAUCC...ACA-3'\n______________UCAGGGA\n______________|||||||\n______________AGUCCCU\n3'-UUU...ACUUA_______ACUAC...AAG-5'\n_____________|_______|\n_____________33______25\n |
11 -- 17 |
26 -- 32 |
-11.6237 kcal/mol |
0.931861 kcal/mol |
5.35475 kcal/mol |
10 18@LB@ | |@LB@5'-AAC...AAUCA CAUCC...ACA-3'@LB@ UCAGGGA@LB@ |||||||@LB@ AGUCCCU@LB@3'-UUU...ACUUA ACUAC...AAG-5'@LB@ | |@LB@ 33 25@LB@@LB@@LB@Energy -5.34 kcal/mol@LB@Hybridization Energy -11.6237 kcal/mol@LB@Unfolding Energy - mRNA 0.931861 kcal/mol@LB@Unfolding Energy - sRNA 5.35475 kcal/mol@LB@@LB@Position - mRNA 11 -- 17@LB@Position - sRNA 26 -- 32@LB@Position Seed - mRNA 11 -- 17@LB@Position Seed - sRNA 26 -- 32@LB@ |
77 |
0.007102 |
0.3087 |
b0832 |
gsiD |
-8.78 |
0.192254 |
77 -- 85 |
7 -- 15 |
glutathione ABC transporter permease |
|
_____________76________86\n_____________|_________|\n5'-UUG...CGUAG_________AUUAC...GAU-3'\n______________AAAUGCGUG\n______________|||||||:|\n______________UUUACGCGC\n3'-UUU...UAUUG_________AGAAAG-5'\n_____________|_________|\n_____________16________6\n |
79 -- 85 |
7 -- 13 |
-12.0627 kcal/mol |
2.10506 kcal/mol |
1.17837 kcal/mol |
76 86@LB@ | |@LB@5'-UUG...CGUAG AUUAC...GAU-3'@LB@ AAAUGCGUG@LB@ |||||||:|@LB@ UUUACGCGC@LB@3'-UUU...UAUUG AGAAAG-5'@LB@ | |@LB@ 16 6@LB@@LB@@LB@Energy -8.78 kcal/mol@LB@Hybridization Energy -12.0627 kcal/mol@LB@Unfolding Energy - mRNA 2.10506 kcal/mol@LB@Unfolding Energy - sRNA 1.17837 kcal/mol@LB@@LB@Position - mRNA 77 -- 85@LB@Position - sRNA 7 -- 15@LB@Position Seed - mRNA 79 -- 85@LB@Position Seed - sRNA 7 -- 13@LB@ |
78 |
0.007118 |
0.3087 |
b1118 |
lolE |
-12.65 |
0.041861 |
19 -- 36 |
6 -- 21 |
lipoprotein-releasing system transmembrane protein |
|
_____________18_________________37\n_____________|__________________|\n5'-CUG...CUACC______CUC_________AACGC...GCA-3'\n______________GGUAAC___GAUGCGCGU\n______________|:||||___:||||||||\n______________CUAUUG___UUACGCGCA\n3'-UUU...UACUA______U___________GAAAG-5'\n_____________|__________________|\n_____________22_________________5\n |
30 -- 36 |
6 -- 12 |
-20.2716 kcal/mol |
6.37224 kcal/mol |
1.24519 kcal/mol |
18 37@LB@ | |@LB@5'-CUG...CUACC CUC AACGC...GCA-3'@LB@ GGUAAC GAUGCGCGU@LB@ |:|||| :||||||||@LB@ CUAUUG UUACGCGCA@LB@3'-UUU...UACUA U GAAAG-5'@LB@ | |@LB@ 22 5@LB@@LB@@LB@Energy -12.65 kcal/mol@LB@Hybridization Energy -20.2716 kcal/mol@LB@Unfolding Energy - mRNA 6.37224 kcal/mol@LB@Unfolding Energy - sRNA 1.24519 kcal/mol@LB@@LB@Position - mRNA 19 -- 36@LB@Position - sRNA 6 -- 21@LB@Position Seed - mRNA 30 -- 36@LB@Position Seed - sRNA 6 -- 12@LB@ |
79 |
0.007292 |
0.3087 |
b0063 |
araB |
-12.45 |
0.045578 |
14 -- 28 |
6 -- 20 |
L-ribulokinase |
|
_____________13______________29\n_____________|_______________|\n5'-CGG...AAGCC________AA_____AACAA...GGU-3'\n______________AUGACAAA__CGCGU\n______________||:|||||__|||||\n______________UAUUGUUU__GCGCA\n3'-UUU...ACUAC________AC_____GAAAG-5'\n_____________|_______________|\n_____________21______________5\n |
15 -- 21 |
13 -- 19 |
-14.5023 kcal/mol |
0.813134 kcal/mol |
1.24244 kcal/mol |
13 29@LB@ | |@LB@5'-CGG...AAGCC AA AACAA...GGU-3'@LB@ AUGACAAA CGCGU@LB@ ||:||||| |||||@LB@ UAUUGUUU GCGCA@LB@3'-UUU...ACUAC AC GAAAG-5'@LB@ | |@LB@ 21 5@LB@@LB@@LB@Energy -12.45 kcal/mol@LB@Hybridization Energy -14.5023 kcal/mol@LB@Unfolding Energy - mRNA 0.813134 kcal/mol@LB@Unfolding Energy - sRNA 1.24244 kcal/mol@LB@@LB@Position - mRNA 14 -- 28@LB@Position - sRNA 6 -- 20@LB@Position Seed - mRNA 15 -- 21@LB@Position Seed - sRNA 13 -- 19@LB@ |
80 |
0.007305 |
0.3087 |
b2392 |
mntH |
-9.52 |
0.145914 |
200 -- 218 |
5 -- 21 |
manganese/divalent cation transporter |
|
_____________199_________________219\n_____________|___________________|\n5'-GCU...CACAA_________CUAU______GAGAG...UCG-3'\n______________GAUGACGAA____CGCGUU\n______________|||:||:||____|||||:\n______________CUAUUGUUU____GCGCAG\n3'-UUU...UACUA_________AC________AAAG-5'\n_____________|___________________|\n_____________22__________________4\n |
202 -- 208 |
13 -- 19 |
-16.4824 kcal/mol |
5.71706 kcal/mol |
1.24955 kcal/mol |
199 219@LB@ | |@LB@5'-GCU...CACAA CUAU GAGAG...UCG-3'@LB@ GAUGACGAA CGCGUU@LB@ |||:||:|| |||||:@LB@ CUAUUGUUU GCGCAG@LB@3'-UUU...UACUA AC AAAG-5'@LB@ | |@LB@ 22 4@LB@@LB@@LB@Energy -9.52 kcal/mol@LB@Hybridization Energy -16.4824 kcal/mol@LB@Unfolding Energy - mRNA 5.71706 kcal/mol@LB@Unfolding Energy - sRNA 1.24955 kcal/mol@LB@@LB@Position - mRNA 200 -- 218@LB@Position - sRNA 5 -- 21@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 13 -- 19@LB@ |