86 |
0.008729 |
0.3104 |
b4213 |
cpdB |
-12.03 |
0.054140 |
68 -- 81 |
8 -- 21 |
2':3'-cyclic-nucleotide 2'-phosphodiesterase |
|
_____________67_____________82\n_____________|______________|\n5'-UGA...CUAUC_U____________CAACU...AUA-3'\n______________G_UAAUGAAUGCGC\n______________|_|||::|||||||\n______________C_AUUGUUUACGCG\n3'-UUU...UACUA_U____________CAGAAAG-5'\n_____________|______________|\n_____________22_____________7\n |
75 -- 81 |
8 -- 14 |
-15.4826 kcal/mol |
2.2212 kcal/mol |
1.23638 kcal/mol |
67 82@LB@ | |@LB@5'-UGA...CUAUC U CAACU...AUA-3'@LB@ G UAAUGAAUGCGC@LB@ | |||::|||||||@LB@ C AUUGUUUACGCG@LB@3'-UUU...UACUA U CAGAAAG-5'@LB@ | |@LB@ 22 7@LB@@LB@@LB@Energy -12.03 kcal/mol@LB@Hybridization Energy -15.4826 kcal/mol@LB@Unfolding Energy - mRNA 2.2212 kcal/mol@LB@Unfolding Energy - sRNA 1.23638 kcal/mol@LB@@LB@Position - mRNA 68 -- 81@LB@Position - sRNA 8 -- 21@LB@Position Seed - mRNA 75 -- 81@LB@Position Seed - sRNA 8 -- 14@LB@ |
150 |
0.01436 |
0.3104 |
b3951 |
pflD |
-11.87 |
0.057659 |
67 -- 75 |
5 -- 13 |
putative glycine radical domain-containing pyruvate formate-lyase |
b0823 |
_____________66________76\n_____________|_________|\n5'-GAU...CCAUC_________AACAU...AAA-3'\n______________GUGCGCGUC\n______________:||||||||\n______________UACGCGCAG\n3'-UUU...UUGUU_________AAAG-5'\n_____________|_________|\n_____________14________4\n |
69 -- 75 |
5 -- 11 |
-16.8274 kcal/mol |
3.80607 kcal/mol |
1.15134 kcal/mol |
66 76@LB@ | |@LB@5'-GAU...CCAUC AACAU...AAA-3'@LB@ GUGCGCGUC@LB@ :||||||||@LB@ UACGCGCAG@LB@3'-UUU...UUGUU AAAG-5'@LB@ | |@LB@ 14 4@LB@@LB@@LB@Energy -11.87 kcal/mol@LB@Hybridization Energy -16.8274 kcal/mol@LB@Unfolding Energy - mRNA 3.80607 kcal/mol@LB@Unfolding Energy - sRNA 1.15134 kcal/mol@LB@@LB@Position - mRNA 67 -- 75@LB@Position - sRNA 5 -- 13@LB@Position Seed - mRNA 69 -- 75@LB@Position Seed - sRNA 5 -- 11@LB@ |
126 |
0.01241 |
0.3104 |
b4379 |
yjjW |
-11.82 |
0.058804 |
207 -- 217 |
8 -- 18 |
putative pyruvate formate lyase activating enzyme |
|
_____________206_________218\n_____________|___________|\n5'-CGG...UGAAC___________UUUAG...UGC-3'\n______________AGCAGAUGCGC\n______________|:||:||||||\n______________UUGUUUACGCG\n3'-UUU...UACUA___________CAGAAAG-5'\n_____________|___________|\n_____________19__________7\n |
211 -- 217 |
8 -- 14 |
-16.9543 kcal/mol |
3.92931 kcal/mol |
1.20363 kcal/mol |
206 218@LB@ | |@LB@5'-CGG...UGAAC UUUAG...UGC-3'@LB@ AGCAGAUGCGC@LB@ |:||:||||||@LB@ UUGUUUACGCG@LB@3'-UUU...UACUA CAGAAAG-5'@LB@ | |@LB@ 19 7@LB@@LB@@LB@Energy -11.82 kcal/mol@LB@Hybridization Energy -16.9543 kcal/mol@LB@Unfolding Energy - mRNA 3.92931 kcal/mol@LB@Unfolding Energy - sRNA 1.20363 kcal/mol@LB@@LB@Position - mRNA 207 -- 217@LB@Position - sRNA 8 -- 18@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 8 -- 14@LB@ |
109 |
0.01118 |
0.3104 |
b3195 |
mlaF |
-11.81 |
0.058997 |
89 -- 105 |
1 -- 18 |
ABC transporter maintaining OM lipid asymmetry ATP-binding protein |
|
_____________88_________________106\n_____________|__________________|\n5'-UUU...AGUAA___________AG_____GCUAA...GAG-3'\n______________AACAAAUGC_C__CUUUC\n______________|||||||||_|__|||||\n______________UUGUUUACG_G__GAAAG\n3'-UUU...UACUA_________C_CA_____-5'\n_____________|_________________|\n_____________19________________1\n |
91 -- 97 |
10 -- 16 |
-16.9522 kcal/mol |
3.89814 kcal/mol |
1.24077 kcal/mol |
88 106@LB@ | |@LB@5'-UUU...AGUAA AG GCUAA...GAG-3'@LB@ AACAAAUGC C CUUUC@LB@ ||||||||| | |||||@LB@ UUGUUUACG G GAAAG@LB@3'-UUU...UACUA C CA -5'@LB@ | |@LB@ 19 1@LB@@LB@@LB@Energy -11.81 kcal/mol@LB@Hybridization Energy -16.9522 kcal/mol@LB@Unfolding Energy - mRNA 3.89814 kcal/mol@LB@Unfolding Energy - sRNA 1.24077 kcal/mol@LB@@LB@Position - mRNA 89 -- 105@LB@Position - sRNA 1 -- 18@LB@Position Seed - mRNA 91 -- 97@LB@Position Seed - sRNA 10 -- 16@LB@ |
27 |
0.001549 |
0.1943 |
b0440 |
hupB |
-11.81 |
0.059023 |
134 -- 149 |
5 -- 20 |
HU DNA-binding transcriptional regulator beta subunit |
|
_____________133______________150\n_____________|________________|\n5'-CGC...CUGAU_____UGC________CGUAC...CUG-3'\n______________AUAAC___UGCGCGUU\n______________|||||___|||||||:\n______________UAUUG___ACGCGCAG\n3'-UUU...ACUAC_____UUU________AAAG-5'\n_____________|________________|\n_____________21_______________4\n |
143 -- 149 |
5 -- 11 |
-15.9939 kcal/mol |
2.93365 kcal/mol |
1.24804 kcal/mol |
133 150@LB@ | |@LB@5'-CGC...CUGAU UGC CGUAC...CUG-3'@LB@ AUAAC UGCGCGUU@LB@ ||||| |||||||:@LB@ UAUUG ACGCGCAG@LB@3'-UUU...ACUAC UUU AAAG-5'@LB@ | |@LB@ 21 4@LB@@LB@@LB@Energy -11.81 kcal/mol@LB@Hybridization Energy -15.9939 kcal/mol@LB@Unfolding Energy - mRNA 2.93365 kcal/mol@LB@Unfolding Energy - sRNA 1.24804 kcal/mol@LB@@LB@Position - mRNA 134 -- 149@LB@Position - sRNA 5 -- 20@LB@Position Seed - mRNA 143 -- 149@LB@Position Seed - sRNA 5 -- 11@LB@ |
138 |
0.01331 |
0.3104 |
b2897 |
sdhE |
-11.73 |
0.060976 |
261 -- 284 |
1 -- 21 |
flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair |
|
_____________260_______________________285\n_____________|_________________________|\n5'-GUA...AACUC____UUU___UC_____________GAACA...ACA-3'\n______________GAUA___CAA__AUGC_CGUUUUUC\n______________||||___|||__||||_|||:||||\n______________CUAU___GUU__UACG_GCAGAAAG\n3'-UUU...UACUA____U___________C________-5'\n_____________|________________________|\n_____________22_______________________1\n |
278 -- 284 |
1 -- 7 |
-16.4732 kcal/mol |
3.48371 kcal/mol |
1.25763 kcal/mol |
260 285@LB@ | |@LB@5'-GUA...AACUC UUU UC GAACA...ACA-3'@LB@ GAUA CAA AUGC CGUUUUUC@LB@ |||| ||| |||| |||:||||@LB@ CUAU GUU UACG GCAGAAAG@LB@3'-UUU...UACUA U C -5'@LB@ | |@LB@ 22 1@LB@@LB@@LB@Energy -11.73 kcal/mol@LB@Hybridization Energy -16.4732 kcal/mol@LB@Unfolding Energy - mRNA 3.48371 kcal/mol@LB@Unfolding Energy - sRNA 1.25763 kcal/mol@LB@@LB@Position - mRNA 261 -- 284@LB@Position - sRNA 1 -- 21@LB@Position Seed - mRNA 278 -- 284@LB@Position Seed - sRNA 1 -- 7@LB@ |
142 |
0.01346 |
0.3104 |
b0729 |
sucD |
-11.71 |
0.061414 |
39 -- 57 |
3 -- 21 |
succinyl-CoA synthetase NAD(P)-binding alpha subunit |
|
_____________38__________________58\n_____________|___________________|\n5'-GUU...GGCGC_________A___G__G__AACGU...CUA-3'\n______________GGUAGCAGA_GUG_GU_UU\n______________|:||:||:|_|:|_||_||\n______________CUAUUGUUU_CGC_CA_AA\n3'-UUU...UACUA_________A___G__G__AG-5'\n_____________|___________________|\n_____________22__________________2\n |
41 -- 47 |
13 -- 19 |
-17.4316 kcal/mol |
4.46052 kcal/mol |
1.257 kcal/mol |
38 58@LB@ | |@LB@5'-GUU...GGCGC A G G AACGU...CUA-3'@LB@ GGUAGCAGA GUG GU UU@LB@ |:||:||:| |:| || ||@LB@ CUAUUGUUU CGC CA AA@LB@3'-UUU...UACUA A G G AG-5'@LB@ | |@LB@ 22 2@LB@@LB@@LB@Energy -11.71 kcal/mol@LB@Hybridization Energy -17.4316 kcal/mol@LB@Unfolding Energy - mRNA 4.46052 kcal/mol@LB@Unfolding Energy - sRNA 1.257 kcal/mol@LB@@LB@Position - mRNA 39 -- 57@LB@Position - sRNA 3 -- 21@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 13 -- 19@LB@ |
81 |
0.007385 |
0.3087 |
b0736 |
ybgC |
-11.71 |
0.061637 |
220 -- 237 |
4 -- 21 |
acyl-CoA thioester hydrolase |
|
_____________219________________238\n_____________|__________________|\n5'-UUG...GUUUC______C___U_______ACUAU...AAA-3'\n______________GAUGGC_GGU_CGCGUCU\n______________|||::|_::|_|||||||\n______________CUAUUG_UUA_GCGCAGA\n3'-UUU...UACUA______U___C_______AAG-5'\n_____________|__________________|\n_____________22_________________3\n |
231 -- 237 |
4 -- 10 |
-19.027 kcal/mol |
6.06673 kcal/mol |
1.2552 kcal/mol |
219 238@LB@ | |@LB@5'-UUG...GUUUC C U ACUAU...AAA-3'@LB@ GAUGGC GGU CGCGUCU@LB@ |||::| ::| |||||||@LB@ CUAUUG UUA GCGCAGA@LB@3'-UUU...UACUA U C AAG-5'@LB@ | |@LB@ 22 3@LB@@LB@@LB@Energy -11.71 kcal/mol@LB@Hybridization Energy -19.027 kcal/mol@LB@Unfolding Energy - mRNA 6.06673 kcal/mol@LB@Unfolding Energy - sRNA 1.2552 kcal/mol@LB@@LB@Position - mRNA 220 -- 237@LB@Position - sRNA 4 -- 21@LB@Position Seed - mRNA 231 -- 237@LB@Position Seed - sRNA 4 -- 10@LB@ |
159 |
0.01499 |
0.3104 |
b2476 |
purC |
-11.66 |
0.062723 |
28 -- 49 |
4 -- 22 |
phosphoribosylaminoimidazole-succinocarboxamide synthetase |
|
_____________27_____________________50\n_____________|______________________|\n5'-GGA...UGAUA_____C____AC__________GCAGG...CAG-3'\n______________UGAUA_GCAA__GUGUGCGUCU\n______________|||||_:|||__:||:||||||\n______________ACUAU_UGUU__UACGCGCAGA\n3'-UUU...CUACU______________________AAG-5'\n_____________|______________________|\n_____________23_____________________3\n |
43 -- 49 |
4 -- 10 |
-20.6907 kcal/mol |
7.77162 kcal/mol |
1.2572 kcal/mol |
27 50@LB@ | |@LB@5'-GGA...UGAUA C AC GCAGG...CAG-3'@LB@ UGAUA GCAA GUGUGCGUCU@LB@ ||||| :||| :||:||||||@LB@ ACUAU UGUU UACGCGCAGA@LB@3'-UUU...CUACU AAG-5'@LB@ | |@LB@ 23 3@LB@@LB@@LB@Energy -11.66 kcal/mol@LB@Hybridization Energy -20.6907 kcal/mol@LB@Unfolding Energy - mRNA 7.77162 kcal/mol@LB@Unfolding Energy - sRNA 1.2572 kcal/mol@LB@@LB@Position - mRNA 28 -- 49@LB@Position - sRNA 4 -- 22@LB@Position Seed - mRNA 43 -- 49@LB@Position Seed - sRNA 4 -- 10@LB@ |
69 |
0.006491 |
0.3087 |
b3347 |
fkpA |
-11.66 |
0.062814 |
96 -- 113 |
4 -- 22 |
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) |
|
_____________95__________________114\n_____________|___________________|\n5'-UGG...AUAGA___________________GUAUG...CAG-3'\n______________UGAUAAUAGG_GCGUGUCU\n______________||||||:|::_|||:||||\n______________ACUAUUGUUU_CGCGCAGA\n3'-UUU...CUACU__________A________AAG-5'\n_____________|___________________|\n_____________23__________________3\n |
107 -- 113 |
4 -- 10 |
-21.7718 kcal/mol |
8.85627 kcal/mol |
1.2572 kcal/mol |
95 114@LB@ | |@LB@5'-UGG...AUAGA GUAUG...CAG-3'@LB@ UGAUAAUAGG GCGUGUCU@LB@ ||||||:|:: |||:||||@LB@ ACUAUUGUUU CGCGCAGA@LB@3'-UUU...CUACU A AAG-5'@LB@ | |@LB@ 23 3@LB@@LB@@LB@Energy -11.66 kcal/mol@LB@Hybridization Energy -21.7718 kcal/mol@LB@Unfolding Energy - mRNA 8.85627 kcal/mol@LB@Unfolding Energy - sRNA 1.2572 kcal/mol@LB@@LB@Position - mRNA 96 -- 113@LB@Position - sRNA 4 -- 22@LB@Position Seed - mRNA 107 -- 113@LB@Position Seed - sRNA 4 -- 10@LB@ |