10 |
0.0003497 |
0.1198 |
b2023 |
hisH |
-14.83 |
0.015853 |
226 -- 277 |
39 -- 86 |
imidazole glycerol phosphate synthase glutamine amidotransferase subunit |
|
_____________225____________________________________________________278\n_____________|______________________________________________________|\n5'-GUG...UACCG___________CUGA___C__U_______GCCA_________CACG________ACCCA...CGG-3'\n______________GCUGCGCCAAC____ACU_GG_GAAGUCU____UUGCG_CGU_____GUUAUGA\n______________:||||||||||____||:_||_|||:|||____:||||_|||_____:||||||\n______________UGACGCGGUUG____UGG_CC_CUUUAGA____GACGC_GCA_____UAAUACU\n3'-UUU...GCUUA__________________U__________ACC______G___UUUAA_______ACUCA...GUG-5'\n_____________|______________________________________________________|\n_____________87_____________________________________________________38\n |
271 -- 277 |
39 -- 45 |
-47.4338 kcal/mol |
15.6024 kcal/mol |
16.9994 kcal/mol |
225 278@LB@ | |@LB@5'-GUG...UACCG CUGA C U GCCA CACG ACCCA...CGG-3'@LB@ GCUGCGCCAAC ACU GG GAAGUCU UUGCG CGU GUUAUGA@LB@ :|||||||||| ||: || |||:||| :|||| ||| :||||||@LB@ UGACGCGGUUG UGG CC CUUUAGA GACGC GCA UAAUACU@LB@3'-UUU...GCUUA U ACC G UUUAA ACUCA...GUG-5'@LB@ | |@LB@ 87 38@LB@@LB@@LB@Energy -14.83 kcal/mol@LB@Hybridization Energy -47.4338 kcal/mol@LB@Unfolding Energy - mRNA 15.6024 kcal/mol@LB@Unfolding Energy - sRNA 16.9994 kcal/mol@LB@@LB@Position - mRNA 226 -- 277@LB@Position - sRNA 39 -- 86@LB@Position Seed - mRNA 271 -- 277@LB@Position Seed - sRNA 39 -- 45@LB@ |
21 |
0.001192 |
0.1727 |
b2526 |
hscA |
-14.48 |
0.018641 |
235 -- 259 |
63 -- 88 |
DnaK-like molecular chaperone specific for IscU |
|
_____________234________________________260\n_____________|__________________________|\n5'-AGC...UUUGA__________________C_UC____GGCGG...UGG-3'\n______________GUGCUGCGCC_GCAUCAG_G__GUCU\n______________:|:|||||||_:||:|||_|__:|||\n______________UAUGACGCGG_UGUGGUC_C__UAGA\n3'-UUU...GCGCU__________U_______C_UU____ACCGA...GUG-5'\n_____________|__________________________|\n_____________89_________________________62\n |
245 -- 251 |
71 -- 77 |
-31.0682 kcal/mol |
9.20475 kcal/mol |
7.38674 kcal/mol |
234 260@LB@ | |@LB@5'-AGC...UUUGA C UC GGCGG...UGG-3'@LB@ GUGCUGCGCC GCAUCAG G GUCU@LB@ :|:||||||| :||:||| | :|||@LB@ UAUGACGCGG UGUGGUC C UAGA@LB@3'-UUU...GCGCU U C UU ACCGA...GUG-5'@LB@ | |@LB@ 89 62@LB@@LB@@LB@Energy -14.48 kcal/mol@LB@Hybridization Energy -31.0682 kcal/mol@LB@Unfolding Energy - mRNA 9.20475 kcal/mol@LB@Unfolding Energy - sRNA 7.38674 kcal/mol@LB@@LB@Position - mRNA 235 -- 259@LB@Position - sRNA 63 -- 88@LB@Position Seed - mRNA 245 -- 251@LB@Position Seed - sRNA 71 -- 77@LB@ |
129 |
0.007194 |
0.1964 |
b3401 |
hslO |
-8.25 |
0.287762 |
98 -- 107 |
1 -- 10 |
heat shock protein Hsp33 |
|
_____________97_________108\n_____________|__________|\n5'-GCC...UUAAC__U_______CCGGA...AGA-3'\n______________CA_GCCGCAC\n______________||_|||||||\n______________GU_CGGCGUG\n3'-UUU...AAAAA__C_______-5'\n_____________|_________|\n_____________11________1\n |
101 -- 107 |
1 -- 7 |
-14.7655 kcal/mol |
1.13179 kcal/mol |
5.44172 kcal/mol |
97 108@LB@ | |@LB@5'-GCC...UUAAC U CCGGA...AGA-3'@LB@ CA GCCGCAC@LB@ || |||||||@LB@ GU CGGCGUG@LB@3'-UUU...AAAAA C -5'@LB@ | |@LB@ 11 1@LB@@LB@@LB@Energy -8.25 kcal/mol@LB@Hybridization Energy -14.7655 kcal/mol@LB@Unfolding Energy - mRNA 1.13179 kcal/mol@LB@Unfolding Energy - sRNA 5.44172 kcal/mol@LB@@LB@Position - mRNA 98 -- 107@LB@Position - sRNA 1 -- 10@LB@Position Seed - mRNA 101 -- 107@LB@Position Seed - sRNA 1 -- 7@LB@ |
52 |
0.002619 |
0.1727 |
b2720 |
hycF |
-12.75 |
0.040951 |
8 -- 55 |
44 -- 94 |
formate hydrogenlyase complex iron-sulfur protein |
|
_____________7______________________________________________________56\n_____________|______________________________________________________|\n____5'-CGACCCU____UAC_________GG_________________CCGA_______CU______CGGUA...CAG-3'\n______________GCGC___AUGCUGCGC__CAACACC______GUUU____UGCGCCG__GAUUAU\n______________||||___||:||||||__|||||||______:|:|____|||||||__:|||||\n______________CGCG___UAUGACGCG__GUUGUGG______UAGA____ACGCGGC__UUAAUA\n3'-UUU...CCCCA____CU___________________UCCCUU____ACCG_______AU______AUACU...GUG-5'\n_____________|______________________________________________________|\n_____________95_____________________________________________________43\n |
41 -- 47 |
52 -- 58 |
-46.3174 kcal/mol |
16.2176 kcal/mol |
17.3533 kcal/mol |
7 56@LB@ | |@LB@ 5'-CGACCCU UAC GG CCGA CU CGGUA...CAG-3'@LB@ GCGC AUGCUGCGC CAACACC GUUU UGCGCCG GAUUAU@LB@ |||| ||:|||||| ||||||| :|:| ||||||| :|||||@LB@ CGCG UAUGACGCG GUUGUGG UAGA ACGCGGC UUAAUA@LB@3'-UUU...CCCCA CU UCCCUU ACCG AU AUACU...GUG-5'@LB@ | |@LB@ 95 43@LB@@LB@@LB@Energy -12.75 kcal/mol@LB@Hybridization Energy -46.3174 kcal/mol@LB@Unfolding Energy - mRNA 16.2176 kcal/mol@LB@Unfolding Energy - sRNA 17.3533 kcal/mol@LB@@LB@Position - mRNA 8 -- 55@LB@Position - sRNA 44 -- 94@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 52 -- 58@LB@ |
59 |
0.002989 |
0.1727 |
b2713 |
hydN |
-12.16 |
0.053402 |
276 -- 298 |
54 -- 76 |
formate dehydrogenase-H [4Fe-4S] ferredoxin subunit |
b3573 |
_____________275______________________299\n_____________|________________________|\n5'-CUU...UUUCU_______A_____A___A______AU-3'\n______________CAUCAGG_AAAUC__GG_CUGUGC\n______________||:||||_|||||__||_|||:||\n______________GUGGUCC_UUUAG__CC_GACGCG\n3'-UUU...CGGUU_______C_____AA_________GCAUU...GUG-5'\n_____________|________________________|\n_____________77_______________________53\n |
276 -- 282 |
70 -- 76 |
-25.5609 kcal/mol |
4.47784 kcal/mol |
8.92391 kcal/mol |
275 299@LB@ | |@LB@5'-CUU...UUUCU A A A AU-3'@LB@ CAUCAGG AAAUC GG CUGUGC@LB@ ||:|||| ||||| || |||:||@LB@ GUGGUCC UUUAG CC GACGCG@LB@3'-UUU...CGGUU C AA GCAUU...GUG-5'@LB@ | |@LB@ 77 53@LB@@LB@@LB@Energy -12.16 kcal/mol@LB@Hybridization Energy -25.5609 kcal/mol@LB@Unfolding Energy - mRNA 4.47784 kcal/mol@LB@Unfolding Energy - sRNA 8.92391 kcal/mol@LB@@LB@Position - mRNA 276 -- 298@LB@Position - sRNA 54 -- 76@LB@Position Seed - mRNA 276 -- 282@LB@Position Seed - sRNA 70 -- 76@LB@ |
85 |
0.004761 |
0.1855 |
b2077 |
iceT |
-11.46 |
0.073016 |
53 -- 74 |
64 -- 86 |
putative citrate/iron-citrate/zinc-citrate efflux transporter |
|
_____________52______________________75\n_____________|_______________________|\n5'-CGG...UCGGA______G_______CU_______ACCAU...UUC-3'\n______________GCUGCG_CAAC_CC__GGGGAUC\n______________:|||||_||||_||__||::|||\n______________UGACGC_GUUG_GG__CCUUUAG\n3'-UUU...GCUUA______G____U__UC_______AACCG...GUG-5'\n_____________|_______________________|\n_____________87______________________63\n |
68 -- 74 |
64 -- 70 |
-29.0378 kcal/mol |
10.1908 kcal/mol |
7.38435 kcal/mol |
52 75@LB@ | |@LB@5'-CGG...UCGGA G CU ACCAU...UUC-3'@LB@ GCUGCG CAAC CC GGGGAUC@LB@ :||||| |||| || ||::|||@LB@ UGACGC GUUG GG CCUUUAG@LB@3'-UUU...GCUUA G U UC AACCG...GUG-5'@LB@ | |@LB@ 87 63@LB@@LB@@LB@Energy -11.46 kcal/mol@LB@Hybridization Energy -29.0378 kcal/mol@LB@Unfolding Energy - mRNA 10.1908 kcal/mol@LB@Unfolding Energy - sRNA 7.38435 kcal/mol@LB@@LB@Position - mRNA 53 -- 74@LB@Position - sRNA 64 -- 86@LB@Position Seed - mRNA 68 -- 74@LB@Position Seed - sRNA 64 -- 70@LB@ |
68 |
0.00345 |
0.1727 |
b3168 |
infB |
-10.64 |
0.105292 |
126 -- 148 |
49 -- 77 |
translation initiation factor IF-2 |
|
_____________125___________________________149\n_____________|_____________________________|\n5'-AAG...CCGGA______________A______________UAUUU...CUG-3'\n______________GCACU_____GAUU_UGGCUGC_CCGUAA\n______________:|||:_____:||:_|||||||_||||||\n______________UGUGG_____UUAG_ACCGACG_GGCAUU\n3'-UUU...GCGGU_____UCCCU____A_______C______UAAUA...GUG-5'\n_____________|_____________________________|\n_____________78____________________________48\n |
136 -- 142 |
56 -- 62 |
-27.6009 kcal/mol |
7.61735 kcal/mol |
9.34562 kcal/mol |
125 149@LB@ | |@LB@5'-AAG...CCGGA A UAUUU...CUG-3'@LB@ GCACU GAUU UGGCUGC CCGUAA@LB@ :|||: :||: ||||||| ||||||@LB@ UGUGG UUAG ACCGACG GGCAUU@LB@3'-UUU...GCGGU UCCCU A C UAAUA...GUG-5'@LB@ | |@LB@ 78 48@LB@@LB@@LB@Energy -10.64 kcal/mol@LB@Hybridization Energy -27.6009 kcal/mol@LB@Unfolding Energy - mRNA 7.61735 kcal/mol@LB@Unfolding Energy - sRNA 9.34562 kcal/mol@LB@@LB@Position - mRNA 126 -- 148@LB@Position - sRNA 49 -- 77@LB@Position Seed - mRNA 136 -- 142@LB@Position Seed - sRNA 56 -- 62@LB@ |
128 |
0.007127 |
0.1961 |
b0696 |
kdpC |
-9.30 |
0.187437 |
90 -- 106 |
44 -- 60 |
potassium translocating ATPase subunit C |
|
_____________89________________107\n_____________|_________________|\n5'-GCG...GCCAU____________C____GGAUU...GGU-3'\n______________GUUGCGCCGUAA_UUAU\n______________|:||||||||||_||||\n______________CGACGCGGCAUU_AAUA\n3'-UUU...AGAAC____________U____AUACU...GUG-5'\n_____________|_________________|\n_____________61________________43\n |
95 -- 101 |
49 -- 55 |
-22.6138 kcal/mol |
6.57247 kcal/mol |
6.74006 kcal/mol |
89 107@LB@ | |@LB@5'-GCG...GCCAU C GGAUU...GGU-3'@LB@ GUUGCGCCGUAA UUAU@LB@ |:|||||||||| ||||@LB@ CGACGCGGCAUU AAUA@LB@3'-UUU...AGAAC U AUACU...GUG-5'@LB@ | |@LB@ 61 43@LB@@LB@@LB@Energy -9.30 kcal/mol@LB@Hybridization Energy -22.6138 kcal/mol@LB@Unfolding Energy - mRNA 6.57247 kcal/mol@LB@Unfolding Energy - sRNA 6.74006 kcal/mol@LB@@LB@Position - mRNA 90 -- 106@LB@Position - sRNA 44 -- 60@LB@Position Seed - mRNA 95 -- 101@LB@Position Seed - sRNA 49 -- 55@LB@ |
147 |
0.008705 |
0.2059 |
b0071 |
leuD |
-8.42 |
0.269085 |
76 -- 114 |
1 -- 54 |
3-isopropylmalate dehydratase small subunit |
|
_____________75_____________________________________________________115\n_____________|______________________________________________________|\n5'-GCC...AGCAA______C_________A__CCGC_________________________G_____GCAUC...AAG-3'\n______________CCGUAA_UU____UGA_GG____CAGGGGCGCGGC___________GG_CGCAC\n______________||||||_||____|||_|:____||:||||:|:||___________||_|||||\n______________GGCAUU_AA____ACU_CU____GUUCCCGUGUCG___________CC_GCGUG\n3'-UUU...GACGC______U__UAAU___A__CAAU____________UGACAAAAAGU__G_____-5'\n_____________|_____________________________________________________|\n_____________55____________________________________________________1\n |
98 -- 104 |
22 -- 28 |
-40.9174 kcal/mol |
15.4198 kcal/mol |
17.077 kcal/mol |
75 115@LB@ | |@LB@5'-GCC...AGCAA C A CCGC G GCAUC...AAG-3'@LB@ CCGUAA UU UGA GG CAGGGGCGCGGC GG CGCAC@LB@ |||||| || ||| |: ||:||||:|:|| || |||||@LB@ GGCAUU AA ACU CU GUUCCCGUGUCG CC GCGUG@LB@3'-UUU...GACGC U UAAU A CAAU UGACAAAAAGU G -5'@LB@ | |@LB@ 55 1@LB@@LB@@LB@Energy -8.42 kcal/mol@LB@Hybridization Energy -40.9174 kcal/mol@LB@Unfolding Energy - mRNA 15.4198 kcal/mol@LB@Unfolding Energy - sRNA 17.077 kcal/mol@LB@@LB@Position - mRNA 76 -- 114@LB@Position - sRNA 1 -- 54@LB@Position Seed - mRNA 98 -- 104@LB@Position Seed - sRNA 22 -- 28@LB@ |
77 |
0.00398 |
0.182 |
b2411 |
ligA |
-14.36 |
0.019662 |
79 -- 95 |
70 -- 86 |
DNA ligase NAD(+)-dependent |
|
_____________78________________96\n_____________|_________________|\n5'-GCA...CAGAA_______G_________ACAUC...CUG-3'\n______________AUUGCGC_AGUACCAGG\n______________|:|||||_|::||||||\n______________UGACGCG_UUGUGGUCC\n3'-UUU...GCUUA_______G_________CUUUA...GUG-5'\n_____________|_________________|\n_____________87________________69\n |
89 -- 95 |
70 -- 76 |
-25.4632 kcal/mol |
3.82569 kcal/mol |
7.27772 kcal/mol |
78 96@LB@ | |@LB@5'-GCA...CAGAA G ACAUC...CUG-3'@LB@ AUUGCGC AGUACCAGG@LB@ |:||||| |::||||||@LB@ UGACGCG UUGUGGUCC@LB@3'-UUU...GCUUA G CUUUA...GUG-5'@LB@ | |@LB@ 87 69@LB@@LB@@LB@Energy -14.36 kcal/mol@LB@Hybridization Energy -25.4632 kcal/mol@LB@Unfolding Energy - mRNA 3.82569 kcal/mol@LB@Unfolding Energy - sRNA 7.27772 kcal/mol@LB@@LB@Position - mRNA 79 -- 95@LB@Position - sRNA 70 -- 86@LB@Position Seed - mRNA 89 -- 95@LB@Position Seed - sRNA 70 -- 76@LB@ |