| 45 |
0.00309 |
0.2325 |
b0584 |
fepA |
-13.78 |
0.026215 |
91 -- 106 |
1 -- 17 |
ferrienterobactin outer membrane transporter |
|
_____________90________________107\n_____________|_________________|\n5'-GAA...CAACU___C_____________AGGAU...ACG-3'\n______________GCA__UGCGUGUCUUUC\n______________:||__||||:|||||||\n______________UGU__ACGCGCAGAAAG\n3'-UUU...ACUAU___UU____________-5'\n_____________|________________|\n_____________18_______________1\n |
100 -- 106 |
1 -- 7 |
-21.1338 kcal/mol |
6.10916 kcal/mol |
1.23994 kcal/mol |
90 107@LB@ | |@LB@5'-GAA...CAACU C AGGAU...ACG-3'@LB@ GCA UGCGUGUCUUUC@LB@ :|| ||||:|||||||@LB@ UGU ACGCGCAGAAAG@LB@3'-UUU...ACUAU UU -5'@LB@ | |@LB@ 18 1@LB@@LB@@LB@Energy -13.78 kcal/mol@LB@Hybridization Energy -21.1338 kcal/mol@LB@Unfolding Energy - mRNA 6.10916 kcal/mol@LB@Unfolding Energy - sRNA 1.23994 kcal/mol@LB@@LB@Position - mRNA 91 -- 106@LB@Position - sRNA 1 -- 17@LB@Position Seed - mRNA 100 -- 106@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 194 |
0.0191 |
0.3104 |
b2698 |
recX |
-10.17 |
0.113250 |
93 -- 107 |
8 -- 22 |
regulatory protein for RecA |
|
_____________92______________108\n_____________|_______________|\n5'-AAA...GUAGA__________G____AGCAG...GAC-3'\n______________UGAUAGCGAA_GCGU\n______________|||||:|:||_|||:\n______________ACUAUUGUUU_CGCG\n3'-UUU...CUACU__________A____CAGAAAG-5'\n_____________|_______________|\n_____________23______________7\n |
96 -- 102 |
13 -- 19 |
-16.2974 kcal/mol |
4.88496 kcal/mol |
1.23838 kcal/mol |
92 108@LB@ | |@LB@5'-AAA...GUAGA G AGCAG...GAC-3'@LB@ UGAUAGCGAA GCGU@LB@ |||||:|:|| |||:@LB@ ACUAUUGUUU CGCG@LB@3'-UUU...CUACU A CAGAAAG-5'@LB@ | |@LB@ 23 7@LB@@LB@@LB@Energy -10.17 kcal/mol@LB@Hybridization Energy -16.2974 kcal/mol@LB@Unfolding Energy - mRNA 4.88496 kcal/mol@LB@Unfolding Energy - sRNA 1.23838 kcal/mol@LB@@LB@Position - mRNA 93 -- 107@LB@Position - sRNA 8 -- 22@LB@Position Seed - mRNA 96 -- 102@LB@Position Seed - sRNA 13 -- 19@LB@ |
| 69 |
0.006491 |
0.3087 |
b3347 |
fkpA |
-11.66 |
0.062814 |
96 -- 113 |
4 -- 22 |
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) |
|
_____________95__________________114\n_____________|___________________|\n5'-UGG...AUAGA___________________GUAUG...CAG-3'\n______________UGAUAAUAGG_GCGUGUCU\n______________||||||:|::_|||:||||\n______________ACUAUUGUUU_CGCGCAGA\n3'-UUU...CUACU__________A________AAG-5'\n_____________|___________________|\n_____________23__________________3\n |
107 -- 113 |
4 -- 10 |
-21.7718 kcal/mol |
8.85627 kcal/mol |
1.2572 kcal/mol |
95 114@LB@ | |@LB@5'-UGG...AUAGA GUAUG...CAG-3'@LB@ UGAUAAUAGG GCGUGUCU@LB@ ||||||:|:: |||:||||@LB@ ACUAUUGUUU CGCGCAGA@LB@3'-UUU...CUACU A AAG-5'@LB@ | |@LB@ 23 3@LB@@LB@@LB@Energy -11.66 kcal/mol@LB@Hybridization Energy -21.7718 kcal/mol@LB@Unfolding Energy - mRNA 8.85627 kcal/mol@LB@Unfolding Energy - sRNA 1.2572 kcal/mol@LB@@LB@Position - mRNA 96 -- 113@LB@Position - sRNA 4 -- 22@LB@Position Seed - mRNA 107 -- 113@LB@Position Seed - sRNA 4 -- 10@LB@ |
| 111 |
0.01125 |
0.3104 |
b0102 |
zapD |
-10.07 |
0.117779 |
99 -- 113 |
8 -- 22 |
FtsZ stabilizer |
|
_____________98______________114\n_____________|_______________|\n5'-ACC...GUCAU_________CG____ACCGG...CCA-3'\n______________UGAUAAUAA__GCGC\n______________||||||:||__||||\n______________ACUAUUGUU__CGCG\n3'-UUU...CUACU_________UA____CAGAAAG-5'\n_____________|_______________|\n_____________23______________7\n |
101 -- 107 |
14 -- 20 |
-15.8633 kcal/mol |
4.55182 kcal/mol |
1.23838 kcal/mol |
98 114@LB@ | |@LB@5'-ACC...GUCAU CG ACCGG...CCA-3'@LB@ UGAUAAUAA GCGC@LB@ ||||||:|| ||||@LB@ ACUAUUGUU CGCG@LB@3'-UUU...CUACU UA CAGAAAG-5'@LB@ | |@LB@ 23 7@LB@@LB@@LB@Energy -10.07 kcal/mol@LB@Hybridization Energy -15.8633 kcal/mol@LB@Unfolding Energy - mRNA 4.55182 kcal/mol@LB@Unfolding Energy - sRNA 1.23838 kcal/mol@LB@@LB@Position - mRNA 99 -- 113@LB@Position - sRNA 8 -- 22@LB@Position Seed - mRNA 101 -- 107@LB@Position Seed - sRNA 14 -- 20@LB@ |
| 5 |
7.362e-05 |
0.04801 |
b0741 |
pal |
-13.90 |
0.024968 |
103 -- 115 |
3 -- 16 |
peptidoglycan-associated outer membrane lipoprotein |
|
_____________102____________116\n_____________|______________|\n5'-GGA...CGUUU______________CCGGC...GCG-3'\n______________CAAA_GCGCGUCUU\n______________||||_|||||||||\n______________GUUU_CGCGCAGAA\n3'-UUU...CUAUU____A_________AG-5'\n_____________|______________|\n_____________17_____________2\n |
109 -- 115 |
3 -- 9 |
-18.0761 kcal/mol |
2.94526 kcal/mol |
1.22934 kcal/mol |
102 116@LB@ | |@LB@5'-GGA...CGUUU CCGGC...GCG-3'@LB@ CAAA GCGCGUCUU@LB@ |||| |||||||||@LB@ GUUU CGCGCAGAA@LB@3'-UUU...CUAUU A AG-5'@LB@ | |@LB@ 17 2@LB@@LB@@LB@Energy -13.90 kcal/mol@LB@Hybridization Energy -18.0761 kcal/mol@LB@Unfolding Energy - mRNA 2.94526 kcal/mol@LB@Unfolding Energy - sRNA 1.22934 kcal/mol@LB@@LB@Position - mRNA 103 -- 115@LB@Position - sRNA 3 -- 16@LB@Position Seed - mRNA 109 -- 115@LB@Position Seed - sRNA 3 -- 9@LB@ |
| 30 |
0.001906 |
0.2094 |
b0616 |
citE |
-12.56 |
0.043465 |
103 -- 116 |
8 -- 21 |
citrate lyase citryl-ACP lyase (beta) subunit |
|
_____________102____________117\n_____________|______________|\n5'-CAA...AUGUC_________G____ACUGG...UCU-3'\n______________GAUGACAAA_GCGC\n______________|||:|||||_||||\n______________CUAUUGUUU_CGCG\n3'-UUU...UACUA_________A____CAGAAAG-5'\n_____________|______________|\n_____________22_____________7\n |
105 -- 111 |
13 -- 19 |
-17.9482 kcal/mol |
4.14919 kcal/mol |
1.23638 kcal/mol |
102 117@LB@ | |@LB@5'-CAA...AUGUC G ACUGG...UCU-3'@LB@ GAUGACAAA GCGC@LB@ |||:||||| ||||@LB@ CUAUUGUUU CGCG@LB@3'-UUU...UACUA A CAGAAAG-5'@LB@ | |@LB@ 22 7@LB@@LB@@LB@Energy -12.56 kcal/mol@LB@Hybridization Energy -17.9482 kcal/mol@LB@Unfolding Energy - mRNA 4.14919 kcal/mol@LB@Unfolding Energy - sRNA 1.23638 kcal/mol@LB@@LB@Position - mRNA 103 -- 116@LB@Position - sRNA 8 -- 21@LB@Position Seed - mRNA 105 -- 111@LB@Position Seed - sRNA 13 -- 19@LB@ |
| 155 |
0.0146 |
0.3104 |
b2614 |
grpE |
-10.46 |
0.101070 |
105 -- 125 |
1 -- 22 |
heat shock protein |
|
_____________104____________________126\n_____________|______________________|\n5'-GAG...AAGAU______________A__GC___CCUUG...CUG-3'\n______________UGAUGACAA_UGUG_GU__UUC\n______________||||:||||_||:|_||__|||\n______________ACUAUUGUU_ACGC_CA__AAG\n3'-UUU...CUACU_________U____G__GA___-5'\n_____________|_____________________|\n_____________23____________________1\n |
107 -- 113 |
14 -- 20 |
-17.1017 kcal/mol |
5.37697 kcal/mol |
1.25963 kcal/mol |
104 126@LB@ | |@LB@5'-GAG...AAGAU A GC CCUUG...CUG-3'@LB@ UGAUGACAA UGUG GU UUC@LB@ ||||:|||| ||:| || |||@LB@ ACUAUUGUU ACGC CA AAG@LB@3'-UUU...CUACU U G GA -5'@LB@ | |@LB@ 23 1@LB@@LB@@LB@Energy -10.46 kcal/mol@LB@Hybridization Energy -17.1017 kcal/mol@LB@Unfolding Energy - mRNA 5.37697 kcal/mol@LB@Unfolding Energy - sRNA 1.25963 kcal/mol@LB@@LB@Position - mRNA 105 -- 125@LB@Position - sRNA 1 -- 22@LB@Position Seed - mRNA 107 -- 113@LB@Position Seed - sRNA 14 -- 20@LB@ |
| 25 |
0.001519 |
0.1943 |
b2817 |
amiC |
-17.97 |
0.004427 |
110 -- 131 |
1 -- 21 |
N-acetylmuramoyl-L-alanine amidase |
|
_____________109____________________132\n_____________|______________________|\n5'-AGU...UAUUA__________UA__________GCUAA...UCA-3'\n______________GAUGACAGAU__UGCGUCUUUC\n______________|||:|||:||__:|||||||||\n______________CUAUUGUUUA__GCGCAGAAAG\n3'-UUU...UACUA__________C___________-5'\n_____________|_____________________|\n_____________22____________________1\n |
125 -- 131 |
1 -- 7 |
-25.6931 kcal/mol |
6.46841 kcal/mol |
1.25763 kcal/mol |
109 132@LB@ | |@LB@5'-AGU...UAUUA UA GCUAA...UCA-3'@LB@ GAUGACAGAU UGCGUCUUUC@LB@ |||:|||:|| :|||||||||@LB@ CUAUUGUUUA GCGCAGAAAG@LB@3'-UUU...UACUA C -5'@LB@ | |@LB@ 22 1@LB@@LB@@LB@Energy -17.97 kcal/mol@LB@Hybridization Energy -25.6931 kcal/mol@LB@Unfolding Energy - mRNA 6.46841 kcal/mol@LB@Unfolding Energy - sRNA 1.25763 kcal/mol@LB@@LB@Position - mRNA 110 -- 131@LB@Position - sRNA 1 -- 21@LB@Position Seed - mRNA 125 -- 131@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 192 |
0.01895 |
0.3104 |
b3333 |
gspL |
-4.89 |
0.645256 |
110 -- 132 |
1 -- 21 |
general secretory pathway component cryptic |
|
_____________109______________________133\n_____________|________________________|\n5'-GAU...CCAGG____________CAUAUU______AACCG...CGC-3'\n______________GAUGGCAAA_GC______UUUUUC\n______________|||::||||_||______|:||||\n______________CUAUUGUUU_CG______AGAAAG\n3'-UUU...UACUA_________A__CGC_________-5'\n_____________|_______________________|\n_____________22______________________1\n |
110 -- 116 |
15 -- 21 |
-12.6455 kcal/mol |
6.50221 kcal/mol |
1.25763 kcal/mol |
109 133@LB@ | |@LB@5'-GAU...CCAGG CAUAUU AACCG...CGC-3'@LB@ GAUGGCAAA GC UUUUUC@LB@ |||::|||| || |:||||@LB@ CUAUUGUUU CG AGAAAG@LB@3'-UUU...UACUA A CGC -5'@LB@ | |@LB@ 22 1@LB@@LB@@LB@Energy -4.89 kcal/mol@LB@Hybridization Energy -12.6455 kcal/mol@LB@Unfolding Energy - mRNA 6.50221 kcal/mol@LB@Unfolding Energy - sRNA 1.25763 kcal/mol@LB@@LB@Position - mRNA 110 -- 132@LB@Position - sRNA 1 -- 21@LB@Position Seed - mRNA 110 -- 116@LB@Position Seed - sRNA 15 -- 21@LB@ |
| 39 |
0.002561 |
0.2224 |
b3845 |
fadA |
-14.30 |
0.021162 |
112 -- 126 |
5 -- 20 |
3-ketoacyl-CoA thiolase (thiolase I) |
|
_____________111______________127\n_____________|________________|\n5'-UCC...UCUGC________________AUAAC...AUU-3'\n______________GUAAUAAA_GCGCGUC\n______________:|||:|||_|||||||\n______________UAUUGUUU_CGCGCAG\n3'-UUU...ACUAC________A_______AAAG-5'\n_____________|________________|\n_____________21_______________4\n |
120 -- 126 |
5 -- 11 |
-19.3309 kcal/mol |
3.78617 kcal/mol |
1.24804 kcal/mol |
111 127@LB@ | |@LB@5'-UCC...UCUGC AUAAC...AUU-3'@LB@ GUAAUAAA GCGCGUC@LB@ :|||:||| |||||||@LB@ UAUUGUUU CGCGCAG@LB@3'-UUU...ACUAC A AAAG-5'@LB@ | |@LB@ 21 4@LB@@LB@@LB@Energy -14.30 kcal/mol@LB@Hybridization Energy -19.3309 kcal/mol@LB@Unfolding Energy - mRNA 3.78617 kcal/mol@LB@Unfolding Energy - sRNA 1.24804 kcal/mol@LB@@LB@Position - mRNA 112 -- 126@LB@Position - sRNA 5 -- 20@LB@Position Seed - mRNA 120 -- 126@LB@Position Seed - sRNA 5 -- 11@LB@ |
