| 160 |
0.009416 |
0.2062 |
b2095 |
gatZ |
-8.10 |
0.305092 |
155 -- 170 |
18 -- 33 |
D-tagatose 1 6-bisphosphate aldolase 2 subunit |
b3132 |
_____________154______________171\n_____________|________________|\n5'-AAU...GUGGC__________G_____AACGC...UUG-3'\n______________UGCGAGGGCA_GGCAU\n______________|:|:||||||_:|||:\n______________AUGUUCCCGU_UCGUG\n3'-UUU...ACUCA__________G_____ACAAA...GUG-5'\n_____________|________________|\n_____________34_______________17\n |
158 -- 164 |
24 -- 30 |
-26.3287 kcal/mol |
9.40457 kcal/mol |
8.82204 kcal/mol |
154 171@LB@ | |@LB@5'-AAU...GUGGC G AACGC...UUG-3'@LB@ UGCGAGGGCA GGCAU@LB@ |:|:|||||| :|||:@LB@ AUGUUCCCGU UCGUG@LB@3'-UUU...ACUCA G ACAAA...GUG-5'@LB@ | |@LB@ 34 17@LB@@LB@@LB@Energy -8.10 kcal/mol@LB@Hybridization Energy -26.3287 kcal/mol@LB@Unfolding Energy - mRNA 9.40457 kcal/mol@LB@Unfolding Energy - sRNA 8.82204 kcal/mol@LB@@LB@Position - mRNA 155 -- 170@LB@Position - sRNA 18 -- 33@LB@Position Seed - mRNA 158 -- 164@LB@Position Seed - sRNA 24 -- 30@LB@ |
| 107 |
0.005754 |
0.1855 |
b3447 |
ggt |
-8.41 |
0.270031 |
252 -- 270 |
52 -- 70 |
gamma-glutamyltranspeptidase |
|
_____________251_________________271\n_____________|___________________|\n5'-GUU...UCUCA_______GUUUUA______CCGCC...CGU-3'\n______________GGAAGUU______GCGCCG\n______________||||:|:______||||||\n______________CCUUUAG______CGCGGC\n3'-UUU...UGGUC_______AACCGA______AUUUA...GUG-5'\n_____________|___________________|\n_____________71__________________51\n |
252 -- 258 |
64 -- 70 |
-19.4063 kcal/mol |
4.14766 kcal/mol |
6.84683 kcal/mol |
251 271@LB@ | |@LB@5'-GUU...UCUCA GUUUUA CCGCC...CGU-3'@LB@ GGAAGUU GCGCCG@LB@ ||||:|: ||||||@LB@ CCUUUAG CGCGGC@LB@3'-UUU...UGGUC AACCGA AUUUA...GUG-5'@LB@ | |@LB@ 71 51@LB@@LB@@LB@Energy -8.41 kcal/mol@LB@Hybridization Energy -19.4063 kcal/mol@LB@Unfolding Energy - mRNA 4.14766 kcal/mol@LB@Unfolding Energy - sRNA 6.84683 kcal/mol@LB@@LB@Position - mRNA 252 -- 270@LB@Position - sRNA 52 -- 70@LB@Position Seed - mRNA 252 -- 258@LB@Position Seed - sRNA 64 -- 70@LB@ |
| 184 |
0.01102 |
0.2089 |
b1033 |
ghrA |
-10.56 |
0.108938 |
6 -- 15 |
64 -- 73 |
glyoxylate/hydroxypyruvate reductase A |
|
_____________5__________16\n_____________|__________|\n______5'-UAAUU__________AUGAC...GCG-3'\n______________UAGGGAAAUC\n______________:|||||||||\n______________GUCCCUUUAG\n3'-UUU...UUGUG__________AACCG...GUG-5'\n_____________|__________|\n_____________74_________63\n |
9 -- 15 |
64 -- 70 |
-14.6499 kcal/mol |
0.954451 kcal/mol |
3.13463 kcal/mol |
5 16@LB@ | |@LB@ 5'-UAAUU AUGAC...GCG-3'@LB@ UAGGGAAAUC@LB@ :|||||||||@LB@ GUCCCUUUAG@LB@3'-UUU...UUGUG AACCG...GUG-5'@LB@ | |@LB@ 74 63@LB@@LB@@LB@Energy -10.56 kcal/mol@LB@Hybridization Energy -14.6499 kcal/mol@LB@Unfolding Energy - mRNA 0.954451 kcal/mol@LB@Unfolding Energy - sRNA 3.13463 kcal/mol@LB@@LB@Position - mRNA 6 -- 15@LB@Position - sRNA 64 -- 73@LB@Position Seed - mRNA 9 -- 15@LB@Position Seed - sRNA 64 -- 70@LB@ |
| 60 |
0.003031 |
0.1727 |
b3432 |
glgB |
-10.57 |
0.108575 |
114 -- 123 |
51 -- 60 |
1 4-alpha-glucan branching enzyme |
|
_____________113________124\n_____________|__________|\n5'-CAU...AGAGU__________UCAGG...GAC-3'\n______________GCUGCGCCGU\n______________||||||||||\n______________CGACGCGGCA\n3'-UUU...AGAAC__________UUUAA...GUG-5'\n_____________|__________|\n_____________61_________50\n |
117 -- 123 |
51 -- 57 |
-20.705 kcal/mol |
5.26394 kcal/mol |
4.87294 kcal/mol |
113 124@LB@ | |@LB@5'-CAU...AGAGU UCAGG...GAC-3'@LB@ GCUGCGCCGU@LB@ ||||||||||@LB@ CGACGCGGCA@LB@3'-UUU...AGAAC UUUAA...GUG-5'@LB@ | |@LB@ 61 50@LB@@LB@@LB@Energy -10.57 kcal/mol@LB@Hybridization Energy -20.705 kcal/mol@LB@Unfolding Energy - mRNA 5.26394 kcal/mol@LB@Unfolding Energy - sRNA 4.87294 kcal/mol@LB@@LB@Position - mRNA 114 -- 123@LB@Position - sRNA 51 -- 60@LB@Position Seed - mRNA 117 -- 123@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 73 |
0.003782 |
0.1804 |
b3560 |
glyQ |
-10.80 |
0.098141 |
7 -- 31 |
51 -- 74 |
glycine tRNA synthetase alpha subunit |
|
_____________6__________________________32\n_____________|__________________________|\n_____5'-ACAGUU____________A__AAA_____G__UAUAC...UGG-3'\n______________CCAGGGAAG_CU_UG___UGCGC_GU\n______________||||||||:_||_||___|||||_||\n______________GGUCCCUUU_GA_AC___ACGCG_CA\n3'-UUU...GUUGU_________A_____CG______G__UUUAA...GUG-5'\n_____________|__________________________|\n_____________75_________________________50\n |
9 -- 15 |
66 -- 72 |
-27.2651 kcal/mol |
7.67928 kcal/mol |
8.78847 kcal/mol |
6 32@LB@ | |@LB@ 5'-ACAGUU A AAA G UAUAC...UGG-3'@LB@ CCAGGGAAG CU UG UGCGC GU@LB@ ||||||||: || || ||||| ||@LB@ GGUCCCUUU GA AC ACGCG CA@LB@3'-UUU...GUUGU A CG G UUUAA...GUG-5'@LB@ | |@LB@ 75 50@LB@@LB@@LB@Energy -10.80 kcal/mol@LB@Hybridization Energy -27.2651 kcal/mol@LB@Unfolding Energy - mRNA 7.67928 kcal/mol@LB@Unfolding Energy - sRNA 8.78847 kcal/mol@LB@@LB@Position - mRNA 7 -- 31@LB@Position - sRNA 51 -- 74@LB@Position Seed - mRNA 9 -- 15@LB@Position Seed - sRNA 66 -- 72@LB@ |
| 189 |
0.01136 |
0.2116 |
b3413 |
gntX |
-9.78 |
0.152759 |
211 -- 235 |
52 -- 76 |
DNA catabolic protein |
|
_____________210_______________________236\n_____________|_________________________|\n5'-CCC...AACAG_______AUU__GC_____A_____AAUGC...AUA-3'\n______________UACCGGG___AU__UGGCU_UGCCG\n______________:|||:||___||__|||||_:||||\n______________GUGGUCC___UA__ACCGA_GCGGC\n3'-UUU...CGGUU_______CUU__GA_____C_____AUUUA...GUG-5'\n_____________|_________________________|\n_____________77________________________51\n |
211 -- 217 |
70 -- 76 |
-26.9968 kcal/mol |
7.94838 kcal/mol |
9.26585 kcal/mol |
210 236@LB@ | |@LB@5'-CCC...AACAG AUU GC A AAUGC...AUA-3'@LB@ UACCGGG AU UGGCU UGCCG@LB@ :|||:|| || ||||| :||||@LB@ GUGGUCC UA ACCGA GCGGC@LB@3'-UUU...CGGUU CUU GA C AUUUA...GUG-5'@LB@ | |@LB@ 77 51@LB@@LB@@LB@Energy -9.78 kcal/mol@LB@Hybridization Energy -26.9968 kcal/mol@LB@Unfolding Energy - mRNA 7.94838 kcal/mol@LB@Unfolding Energy - sRNA 9.26585 kcal/mol@LB@@LB@Position - mRNA 211 -- 235@LB@Position - sRNA 52 -- 76@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 70 -- 76@LB@ |
| 81 |
0.004478 |
0.1855 |
b3327 |
gspF |
-8.77 |
0.233220 |
243 -- 251 |
26 -- 34 |
general secretory pathway component cryptic |
|
_____________242_______252\n_____________|_________|\n5'-AUG...AAAAA_________AUCAU...AAG-3'\n______________UUGCAAGGG\n______________||:||||||\n______________AAUGUUCCC\n3'-UUU...UACUC_________GUGUC...GUG-5'\n_____________|_________|\n_____________35________25\n |
245 -- 251 |
26 -- 32 |
-12.3281 kcal/mol |
0.874927 kcal/mol |
2.67841 kcal/mol |
242 252@LB@ | |@LB@5'-AUG...AAAAA AUCAU...AAG-3'@LB@ UUGCAAGGG@LB@ ||:||||||@LB@ AAUGUUCCC@LB@3'-UUU...UACUC GUGUC...GUG-5'@LB@ | |@LB@ 35 25@LB@@LB@@LB@Energy -8.77 kcal/mol@LB@Hybridization Energy -12.3281 kcal/mol@LB@Unfolding Energy - mRNA 0.874927 kcal/mol@LB@Unfolding Energy - sRNA 2.67841 kcal/mol@LB@@LB@Position - mRNA 243 -- 251@LB@Position - sRNA 26 -- 34@LB@Position Seed - mRNA 245 -- 251@LB@Position Seed - sRNA 26 -- 32@LB@ |
| 61 |
0.003042 |
0.1727 |
b0104 |
guaC |
-6.79 |
0.490983 |
117 -- 124 |
52 -- 59 |
GMP reductase |
|
_____________116______125\n_____________|________|\n5'-AUG...CAGUC________CAUUG...GUC-3'\n______________UUGCGCCG\n______________:|||||||\n______________GACGCGGC\n3'-UUU...GAACC________AUUUA...GUG-5'\n_____________|________|\n_____________60_______51\n |
118 -- 124 |
52 -- 58 |
-14.4979 kcal/mol |
2.89251 kcal/mol |
4.81798 kcal/mol |
116 125@LB@ | |@LB@5'-AUG...CAGUC CAUUG...GUC-3'@LB@ UUGCGCCG@LB@ :|||||||@LB@ GACGCGGC@LB@3'-UUU...GAACC AUUUA...GUG-5'@LB@ | |@LB@ 60 51@LB@@LB@@LB@Energy -6.79 kcal/mol@LB@Hybridization Energy -14.4979 kcal/mol@LB@Unfolding Energy - mRNA 2.89251 kcal/mol@LB@Unfolding Energy - sRNA 4.81798 kcal/mol@LB@@LB@Position - mRNA 117 -- 124@LB@Position - sRNA 52 -- 59@LB@Position Seed - mRNA 118 -- 124@LB@Position Seed - sRNA 52 -- 58@LB@ |
| 111 |
0.005938 |
0.1855 |
b0962 |
helD |
-11.18 |
0.082726 |
7 -- 19 |
71 -- 82 |
DNA helicase IV |
|
_____________6_____________20\n_____________|_____________|\n_____5'-CAGAGU________G____CCCAG...GCC-3'\n______________CGCCAACA_CCAG\n______________||||||||_||||\n______________GCGGUUGU_GGUC\n3'-UUU...AUGAC_____________CCUUU...GUG-5'\n_____________|_____________|\n_____________83____________70\n |
8 -- 14 |
75 -- 81 |
-19.0718 kcal/mol |
1.18849 kcal/mol |
6.70061 kcal/mol |
6 20@LB@ | |@LB@ 5'-CAGAGU G CCCAG...GCC-3'@LB@ CGCCAACA CCAG@LB@ |||||||| ||||@LB@ GCGGUUGU GGUC@LB@3'-UUU...AUGAC CCUUU...GUG-5'@LB@ | |@LB@ 83 70@LB@@LB@@LB@Energy -11.18 kcal/mol@LB@Hybridization Energy -19.0718 kcal/mol@LB@Unfolding Energy - mRNA 1.18849 kcal/mol@LB@Unfolding Energy - sRNA 6.70061 kcal/mol@LB@@LB@Position - mRNA 7 -- 19@LB@Position - sRNA 71 -- 82@LB@Position Seed - mRNA 8 -- 14@LB@Position Seed - sRNA 75 -- 81@LB@ |
| 98 |
0.005208 |
0.1855 |
b4174 |
hflK |
-10.42 |
0.116019 |
265 -- 284 |
65 -- 83 |
modulator for HflB protease specific for phage lambda cII repressor |
|
_____________264__________________285\n_____________|____________________|\n5'-AGA...ACCUG___G____U__G________GGAAA...GUC-3'\n______________GCG_CAAC_CU_AGGGAAAU\n______________|||_||||_|:_||||||||\n______________CGC_GUUG_GG_UCCCUUUA\n3'-UUU...UAUGA___G____U___________GAACC...GUG-5'\n_____________|____________________|\n_____________84___________________64\n |
278 -- 284 |
65 -- 71 |
-24.0318 kcal/mol |
6.25533 kcal/mol |
7.35968 kcal/mol |
264 285@LB@ | |@LB@5'-AGA...ACCUG G U G GGAAA...GUC-3'@LB@ GCG CAAC CU AGGGAAAU@LB@ ||| |||| |: ||||||||@LB@ CGC GUUG GG UCCCUUUA@LB@3'-UUU...UAUGA G U GAACC...GUG-5'@LB@ | |@LB@ 84 64@LB@@LB@@LB@Energy -10.42 kcal/mol@LB@Hybridization Energy -24.0318 kcal/mol@LB@Unfolding Energy - mRNA 6.25533 kcal/mol@LB@Unfolding Energy - sRNA 7.35968 kcal/mol@LB@@LB@Position - mRNA 265 -- 284@LB@Position - sRNA 65 -- 83@LB@Position Seed - mRNA 278 -- 284@LB@Position Seed - sRNA 65 -- 71@LB@ |
