31 |
0.009434 |
0.2502 |
ct_824 |
N/A |
-6.02 |
0.231369 |
20 -- 32 |
21 -- 33 |
Zn-dependent peptidase |
|
_____________19____________33\n_____________|_____________|\n5'-GUC...UUUUA________G____GUAUG...CCG-3'\n______________GGAAGCUA_UCUA\n______________:|||||||_||:|\n______________UCUUCGAU_AGGU\n3'-UUU...CUCAG________A____ACCGC...GAA-5'\n_____________|_____________|\n_____________34____________20\n |
21 -- 27 |
26 -- 32 |
-13.8347 kcal/mol |
3.08274 kcal/mol |
4.73034 kcal/mol |
19 33@LB@ | |@LB@5'-GUC...UUUUA G GUAUG...CCG-3'@LB@ GGAAGCUA UCUA@LB@ :||||||| ||:|@LB@ UCUUCGAU AGGU@LB@3'-UUU...CUCAG A ACCGC...GAA-5'@LB@ | |@LB@ 34 20@LB@@LB@@LB@Energy -6.02 kcal/mol@LB@Hybridization Energy -13.8347 kcal/mol@LB@Unfolding Energy - mRNA 3.08274 kcal/mol@LB@Unfolding Energy - sRNA 4.73034 kcal/mol@LB@@LB@Position - mRNA 20 -- 32@LB@Position - sRNA 21 -- 33@LB@Position Seed - mRNA 21 -- 27@LB@Position Seed - sRNA 26 -- 32@LB@ |
32 |
0.009822 |
0.2518 |
ct_649 |
ygfA |
-6.64 |
0.172247 |
22 -- 28 |
80 -- 86 |
5-formyltetrahydrofolate cyclo-ligase |
|
_____________21______29\n_____________|_______|\n5'-UAC...AAGUG_______CCGAG...AGC-3'\n______________AUGGCUA\n______________|:|||||\n______________UGCCGAU\n3'-UUU...CUCUA_______UGAGG...GAA-5'\n_____________|_______|\n_____________87______79\n |
22 -- 28 |
80 -- 86 |
-8.81528 kcal/mol |
1.11082 kcal/mol |
1.06449 kcal/mol |
21 29@LB@ | |@LB@5'-UAC...AAGUG CCGAG...AGC-3'@LB@ AUGGCUA@LB@ |:|||||@LB@ UGCCGAU@LB@3'-UUU...CUCUA UGAGG...GAA-5'@LB@ | |@LB@ 87 79@LB@@LB@@LB@Energy -6.64 kcal/mol@LB@Hybridization Energy -8.81528 kcal/mol@LB@Unfolding Energy - mRNA 1.11082 kcal/mol@LB@Unfolding Energy - sRNA 1.06449 kcal/mol@LB@@LB@Position - mRNA 22 -- 28@LB@Position - sRNA 80 -- 86@LB@Position Seed - mRNA 22 -- 28@LB@Position Seed - sRNA 80 -- 86@LB@ |
33 |
0.01042 |
0.2518 |
ct_780 |
N/A |
-7.85 |
0.092931 |
30 -- 50 |
15 -- 34 |
|
|
_____________29____________________51\n_____________|_____________________|\n5'-UGU...AAAAA___C____GAA_G________GUCAA...UCA-3'\n______________CAG_AAGU___U_CAUGGCGU\n______________|||_|||:___|_||||||||\n______________GUC_UUCG___A_GUACCGCA\n3'-UUU...UCUCA________AUA_G________AUCUU...GAA-5'\n_____________|_____________________|\n_____________35____________________14\n |
44 -- 50 |
15 -- 21 |
-20.7959 kcal/mol |
4.71518 kcal/mol |
8.23265 kcal/mol |
29 51@LB@ | |@LB@5'-UGU...AAAAA C GAA G GUCAA...UCA-3'@LB@ CAG AAGU U CAUGGCGU@LB@ ||| |||: | ||||||||@LB@ GUC UUCG A GUACCGCA@LB@3'-UUU...UCUCA AUA G AUCUU...GAA-5'@LB@ | |@LB@ 35 14@LB@@LB@@LB@Energy -7.85 kcal/mol@LB@Hybridization Energy -20.7959 kcal/mol@LB@Unfolding Energy - mRNA 4.71518 kcal/mol@LB@Unfolding Energy - sRNA 8.23265 kcal/mol@LB@@LB@Position - mRNA 30 -- 50@LB@Position - sRNA 15 -- 34@LB@Position Seed - mRNA 44 -- 50@LB@Position Seed - sRNA 15 -- 21@LB@ |
34 |
0.01043 |
0.2518 |
ct_642 |
N/A |
-9.37 |
0.040224 |
239 -- 246 |
53 -- 60 |
|
|
_____________238______247\n_____________|________|\n5'-AGG...UCUUC________CUUCG...CUG-3'\n______________UCCCCCCU\n______________||||||||\n______________AGGGGGGA\n3'-UUU...ACUGA________CACAU...GAA-5'\n_____________|________|\n_____________61_______52\n |
240 -- 246 |
53 -- 59 |
-15.9954 kcal/mol |
0.170944 kcal/mol |
6.45136 kcal/mol |
238 247@LB@ | |@LB@5'-AGG...UCUUC CUUCG...CUG-3'@LB@ UCCCCCCU@LB@ ||||||||@LB@ AGGGGGGA@LB@3'-UUU...ACUGA CACAU...GAA-5'@LB@ | |@LB@ 61 52@LB@@LB@@LB@Energy -9.37 kcal/mol@LB@Hybridization Energy -15.9954 kcal/mol@LB@Unfolding Energy - mRNA 0.170944 kcal/mol@LB@Unfolding Energy - sRNA 6.45136 kcal/mol@LB@@LB@Position - mRNA 239 -- 246@LB@Position - sRNA 53 -- 60@LB@Position Seed - mRNA 240 -- 246@LB@Position Seed - sRNA 53 -- 59@LB@ |
35 |
0.01072 |
0.2518 |
ct_483 |
N/A |
-8.14 |
0.079674 |
97 -- 146 |
5 -- 57 |
|
|
_____________96______________________________________________________147\n_____________|_______________________________________________________|\n5'-UAG...GUCUU____GAC_______G_GAAAU_____UC____________AAAAAAA________AGGUA...GCG-3'\n______________CUCC____UACAGA_A_____GAGUC_____CUAUUCCAU________AAUACCA\n______________|:||____||||:|_|_____|||||_____|||||||||________|||||||\n______________GGGG____AUGUUU_U_____CUCAG_____GAUAAGGUA________UUAUGGU\n3'-UUU...GAAGG____ACAC______G_GAU_______UCUUC_________CCGCAAUC_______UGAA-5'\n_____________|_______________________________________________________|\n_____________58______________________________________________________4\n |
140 -- 146 |
5 -- 11 |
-33.404 kcal/mol |
8.71732 kcal/mol |
16.5501 kcal/mol |
96 147@LB@ | |@LB@5'-UAG...GUCUU GAC G GAAAU UC AAAAAAA AGGUA...GCG-3'@LB@ CUCC UACAGA A GAGUC CUAUUCCAU AAUACCA@LB@ |:|| ||||:| | ||||| ||||||||| |||||||@LB@ GGGG AUGUUU U CUCAG GAUAAGGUA UUAUGGU@LB@3'-UUU...GAAGG ACAC G GAU UCUUC CCGCAAUC UGAA-5'@LB@ | |@LB@ 58 4@LB@@LB@@LB@Energy -8.14 kcal/mol@LB@Hybridization Energy -33.404 kcal/mol@LB@Unfolding Energy - mRNA 8.71732 kcal/mol@LB@Unfolding Energy - sRNA 16.5501 kcal/mol@LB@@LB@Position - mRNA 97 -- 146@LB@Position - sRNA 5 -- 57@LB@Position Seed - mRNA 140 -- 146@LB@Position Seed - sRNA 5 -- 11@LB@ |
36 |
0.01184 |
0.2704 |
ct_030 |
gmk |
-11.03 |
0.015227 |
49 -- 70 |
6 -- 34 |
guanylate kinase |
|
_____________48____________________________71\n_____________|_____________________________|\n5'-AUA...UGAUG_____________________________CCGAG...CAC-3'\n______________CGGAAGCU___UCAUG____UAGAGUACC\n______________|:||||||___:||||____||||:||||\n______________GUCUUCGA___GGUAC____AUCUUAUGG\n3'-UUU...UCUCA________UAA_____CGCA_________UUGAA-5'\n_____________|_____________________________|\n_____________35____________________________5\n |
64 -- 70 |
6 -- 12 |
-24.3478 kcal/mol |
4.72233 kcal/mol |
8.59183 kcal/mol |
48 71@LB@ | |@LB@5'-AUA...UGAUG CCGAG...CAC-3'@LB@ CGGAAGCU UCAUG UAGAGUACC@LB@ |:|||||| :|||| ||||:||||@LB@ GUCUUCGA GGUAC AUCUUAUGG@LB@3'-UUU...UCUCA UAA CGCA UUGAA-5'@LB@ | |@LB@ 35 5@LB@@LB@@LB@Energy -11.03 kcal/mol@LB@Hybridization Energy -24.3478 kcal/mol@LB@Unfolding Energy - mRNA 4.72233 kcal/mol@LB@Unfolding Energy - sRNA 8.59183 kcal/mol@LB@@LB@Position - mRNA 49 -- 70@LB@Position - sRNA 6 -- 34@LB@Position Seed - mRNA 64 -- 70@LB@Position Seed - sRNA 6 -- 12@LB@ |
37 |
0.01294 |
0.2859 |
ct_591 |
sdhB |
-7.06 |
0.139804 |
161 -- 176 |
18 -- 34 |
succinate dehydrogenase iron sulfur subunit |
|
_____________160_______________177\n_____________|_________________|\n5'-AAA...AUUUA_____________UG__AAAUA...GGG-3'\n______________UAGAGGC_GUUCC__GG\n______________:|||:||_:||||__||\n______________GUCUUCG_UAAGG__CC\n3'-UUU...UCUCA_______A_____UA__GCAAU...GAA-5'\n_____________|_________________|\n_____________35________________17\n |
161 -- 167 |
28 -- 34 |
-17.8156 kcal/mol |
5.77845 kcal/mol |
4.97803 kcal/mol |
160 177@LB@ | |@LB@5'-AAA...AUUUA UG AAAUA...GGG-3'@LB@ UAGAGGC GUUCC GG@LB@ :|||:|| :|||| ||@LB@ GUCUUCG UAAGG CC@LB@3'-UUU...UCUCA A UA GCAAU...GAA-5'@LB@ | |@LB@ 35 17@LB@@LB@@LB@Energy -7.06 kcal/mol@LB@Hybridization Energy -17.8156 kcal/mol@LB@Unfolding Energy - mRNA 5.77845 kcal/mol@LB@Unfolding Energy - sRNA 4.97803 kcal/mol@LB@@LB@Position - mRNA 161 -- 176@LB@Position - sRNA 18 -- 34@LB@Position Seed - mRNA 161 -- 167@LB@Position Seed - sRNA 28 -- 34@LB@ |
38 |
0.01345 |
0.2859 |
ct_769 |
ybeB |
-11.98 |
0.008536 |
76 -- 102 |
17 -- 43 |
ribosome silencing factor |
|
_____________75___________________________103\n_____________|____________________________|\n5'-CUU...GAUCU________GAA_________________AAAGA...CCC-3'\n______________CGCUAGAG___AGAGGCUAUUUU_UGGU\n______________|:||||||___|||:||||||::_|||:\n______________GUGAUCUC___UCUUCGAUAAGG_ACCG\n3'-UUU...UGUUU________AG_____________U____CAAUC...GAA-5'\n_____________|____________________________|\n_____________44___________________________16\n |
91 -- 97 |
23 -- 29 |
-31.1732 kcal/mol |
6.53125 kcal/mol |
12.6613 kcal/mol |
75 103@LB@ | |@LB@5'-CUU...GAUCU GAA AAAGA...CCC-3'@LB@ CGCUAGAG AGAGGCUAUUUU UGGU@LB@ |:|||||| |||:||||||:: |||:@LB@ GUGAUCUC UCUUCGAUAAGG ACCG@LB@3'-UUU...UGUUU AG U CAAUC...GAA-5'@LB@ | |@LB@ 44 16@LB@@LB@@LB@Energy -11.98 kcal/mol@LB@Hybridization Energy -31.1732 kcal/mol@LB@Unfolding Energy - mRNA 6.53125 kcal/mol@LB@Unfolding Energy - sRNA 12.6613 kcal/mol@LB@@LB@Position - mRNA 76 -- 102@LB@Position - sRNA 17 -- 43@LB@Position Seed - mRNA 91 -- 97@LB@Position Seed - sRNA 23 -- 29@LB@ |
39 |
0.01357 |
0.2859 |
ct_401 |
gltT |
-7.80 |
0.095127 |
36 -- 47 |
44 -- 55 |
sodium:dicarboxylate symport protein |
|
_____________35___________48\n_____________|____________|\n5'-UGU...GGUAU____________AAAGG...AUA-3'\n______________CCUGUGUACAGA\n______________||||||||||:|\n______________GGACACAUGUUU\n3'-UUU...AGGGG____________GUGAU...GAA-5'\n_____________|____________|\n_____________56___________43\n |
41 -- 47 |
44 -- 50 |
-17.8988 kcal/mol |
2.58215 kcal/mol |
7.51272 kcal/mol |
35 48@LB@ | |@LB@5'-UGU...GGUAU AAAGG...AUA-3'@LB@ CCUGUGUACAGA@LB@ ||||||||||:|@LB@ GGACACAUGUUU@LB@3'-UUU...AGGGG GUGAU...GAA-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -7.80 kcal/mol@LB@Hybridization Energy -17.8988 kcal/mol@LB@Unfolding Energy - mRNA 2.58215 kcal/mol@LB@Unfolding Energy - sRNA 7.51272 kcal/mol@LB@@LB@Position - mRNA 36 -- 47@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 44 -- 50@LB@ |
40 |
0.01393 |
0.2859 |
ct_695 |
N/A |
-4.73 |
0.403172 |
160 -- 166 |
82 -- 88 |
|
|
_____________159_____167\n_____________|_______|\n5'-AUU...AAGGU_______GUUCG...AGG-3'\n______________AUGCGGU\n______________||:|||:\n______________UAUGCCG\n3'-UUU...GCCUC_______AUUGA...GAA-5'\n_____________|_______|\n_____________89______81\n |
160 -- 166 |
82 -- 88 |
-8.16543 kcal/mol |
2.33498 kcal/mol |
1.09753 kcal/mol |
159 167@LB@ | |@LB@5'-AUU...AAGGU GUUCG...AGG-3'@LB@ AUGCGGU@LB@ ||:|||:@LB@ UAUGCCG@LB@3'-UUU...GCCUC AUUGA...GAA-5'@LB@ | |@LB@ 89 81@LB@@LB@@LB@Energy -4.73 kcal/mol@LB@Hybridization Energy -8.16543 kcal/mol@LB@Unfolding Energy - mRNA 2.33498 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 160 -- 166@LB@Position - sRNA 82 -- 88@LB@Position Seed - mRNA 160 -- 166@LB@Position Seed - sRNA 82 -- 88@LB@ |