39 |
0.001399 |
0.1215 |
stm4007 |
glnA |
-20.44 |
0.014679 |
143 -- 217 |
36 -- 106 |
type I glutamate--ammonia ligase |
|
_____________142_____________________________________________________________________________218\n_____________|_______________________________________________________________________________|\n5'-CAC...CAGCA______A_____UC____UAC_____________C___G_C___U___GGA____A____UAU_______U________UUUGA...CGA-3'\n______________GAAUUG_AGAUC____GU___CACGACGAC_CGA_CAU_A_CAA_CCG___GAGU_CAAG___GUCCG_C_GAACACGU\n______________||||:|_|||:|____|:___|||:||:||_|:|_|||_|_|||_|||___:||:_|||:___|:||:_|_|||||||:\n______________CUUAGC_UCUGG____CG___GUGUUGUUG_GUU_GUA_U_GUU_GGC___UUCG_GUUU___CGGGU_G_CUUGUGCG\n3'-UUU...CCAGA______G_____UUAA__UUU_________U_______G_________A___________U_______A_U________UAAGG...UCA-5'\n_____________|_______________________________________________________________________________|\n_____________107_____________________________________________________________________________35\n |
211 -- 217 |
36 -- 42 |
-55.3576 kcal/mol |
10.964 kcal/mol |
31.8708 kcal/mol |
142 218@LB@ | |@LB@5'-CAC...CAGCA A UC UAC C G C U GGA A UAU U UUUGA...CGA-3'@LB@ GAAUUG AGAUC GU CACGACGAC CGA CAU A CAA CCG GAGU CAAG GUCCG C GAACACGU@LB@ ||||:| |||:| |: |||:||:|| |:| ||| | ||| ||| :||: |||: |:||: | |||||||:@LB@ CUUAGC UCUGG CG GUGUUGUUG GUU GUA U GUU GGC UUCG GUUU CGGGU G CUUGUGCG@LB@3'-UUU...CCAGA G UUAA UUU U G A U A U UAAGG...UCA-5'@LB@ | |@LB@ 107 35@LB@@LB@@LB@Energy -20.44 kcal/mol@LB@Hybridization Energy -55.3576 kcal/mol@LB@Unfolding Energy - mRNA 10.964 kcal/mol@LB@Unfolding Energy - sRNA 31.8708 kcal/mol@LB@@LB@Position - mRNA 143 -- 217@LB@Position - sRNA 36 -- 106@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 36 -- 42@LB@ |
190 |
0.01053 |
0.1967 |
stm4032 |
N/A |
-12.98 |
0.242168 |
37 -- 92 |
31 -- 85 |
lipase |
stm0490 |
_____________36__________________93\n_____________|___________________|\n5'-CUU...UCGCG____G______G_______GAGGG...GCU-3'\n______________AACA_AAUAUU_AUGACCG\n______________||||_||:||:_|::||||\n______________UUGU_UUGUAG_UGUUGGC\n3'-UUU...UGUUG____G______________AUUCG...UCA-5'\n_____________|___________________|\n_____________86__________________30\n |
283 -- 289 |
62 -- 68 |
-14.8704 kcal/mol |
1.51414 kcal/mol |
6.51321 kcal/mol |
36 93@LB@ | |@LB@5'-CUU...UCGCG G G GAGGG...GCU-3'@LB@ AACA AAUAUU AUGACCG@LB@ |||| ||:||: |::||||@LB@ UUGU UUGUAG UGUUGGC@LB@3'-UUU...UGUUG G AUUCG...UCA-5'@LB@ | |@LB@ 86 30@LB@@LB@@LB@Energy -12.98 kcal/mol@LB@Hybridization Energy -14.8704 kcal/mol@LB@Unfolding Energy - mRNA 1.51414 kcal/mol@LB@Unfolding Energy - sRNA 6.51321 kcal/mol@LB@@LB@Position - mRNA 37 -- 92@LB@Position - sRNA 31 -- 85@LB@Position Seed - mRNA 283 -- 289@LB@Position Seed - sRNA 62 -- 68@LB@ |
59 |
0.00232 |
0.14 |
stm4105 |
metF |
-16.51 |
0.066936 |
223 -- 245 |
40 -- 59 |
methylenetetrahydrofolate reductase [NAD(P)H] |
|
_____________222__________________246\n_____________|____________________|\n5'-AAG...UUUAC__________AUA_______GCGAU...GCA-3'\n______________AACACAACAA___AUAACAU\n______________||||||||||___|:|||||\n______________UUGUGUUGUU___UGUUGUA\n3'-UUU...AACGU__________G_________GUGUU...UCA-5'\n_____________|____________________|\n_____________60___________________39\n |
175 -- 181 |
70 -- 76 |
-16.6304 kcal/mol |
0.675865 kcal/mol |
3.87174 kcal/mol |
222 246@LB@ | |@LB@5'-AAG...UUUAC AUA GCGAU...GCA-3'@LB@ AACACAACAA AUAACAU@LB@ |||||||||| |:|||||@LB@ UUGUGUUGUU UGUUGUA@LB@3'-UUU...AACGU G GUGUU...UCA-5'@LB@ | |@LB@ 60 39@LB@@LB@@LB@Energy -16.51 kcal/mol@LB@Hybridization Energy -16.6304 kcal/mol@LB@Unfolding Energy - mRNA 0.675865 kcal/mol@LB@Unfolding Energy - sRNA 3.87174 kcal/mol@LB@@LB@Position - mRNA 223 -- 245@LB@Position - sRNA 40 -- 59@LB@Position Seed - mRNA 175 -- 181@LB@Position Seed - sRNA 70 -- 76@LB@ |
95 |
0.004301 |
0.1596 |
stm4114 |
pflD |
-11.77 |
0.360092 |
46 -- 100 |
34 -- 88 |
formate C-acetyltransferase |
stm0843 |
_____________45_____________________101\n_____________|______________________|\n5'-UUU...CGGUA_______C______________GAACA...AGA-3'\n______________AAACGCG_CGACGC__CAUUAU\n______________||||:|:_|:||:|__|||:|:\n______________UUUGUGU_GUUGUG__GUAGUG\n3'-UUU...UAACG_______U______UU______UUGGC...UCA-5'\n_____________|______________________|\n_____________89_____________________33\n |
46 -- 52 |
82 -- 88 |
-16.7675 kcal/mol |
5.49067 kcal/mol |
5.48747 kcal/mol |
45 101@LB@ | |@LB@5'-UUU...CGGUA C GAACA...AGA-3'@LB@ AAACGCG CGACGC CAUUAU@LB@ ||||:|: |:||:| |||:|:@LB@ UUUGUGU GUUGUG GUAGUG@LB@3'-UUU...UAACG U UU UUGGC...UCA-5'@LB@ | |@LB@ 89 33@LB@@LB@@LB@Energy -11.77 kcal/mol@LB@Hybridization Energy -16.7675 kcal/mol@LB@Unfolding Energy - mRNA 5.49067 kcal/mol@LB@Unfolding Energy - sRNA 5.48747 kcal/mol@LB@@LB@Position - mRNA 46 -- 100@LB@Position - sRNA 34 -- 88@LB@Position Seed - mRNA 46 -- 52@LB@Position Seed - sRNA 82 -- 88@LB@ |
64 |
0.003108 |
0.1596 |
stm4162 |
thiF |
-13.53 |
0.200092 |
247 -- 294 |
34 -- 76 |
molybdopterin/thiamine biosynthesis adenylyltransferase |
|
_____________246___________________295\n_____________|_____________________|\n5'-GCA...GCUCG_______________A_____AGCAA...UUG-3'\n______________GCGAUAUCGCGAUUG_AGGCC\n______________:|:|:|||:|:|::|_|:|||\n______________UGUUGUAGUGUUGGC_UUCGG\n3'-UUU...UGUUG_______________A_____UUUUC...UCA-5'\n_____________|_____________________|\n_____________77____________________33\n |
248 -- 254 |
69 -- 75 |
-25.2172 kcal/mol |
7.66984 kcal/mol |
8.92374 kcal/mol |
246 295@LB@ | |@LB@5'-GCA...GCUCG A AGCAA...UUG-3'@LB@ GCGAUAUCGCGAUUG AGGCC@LB@ :|:|:|||:|:|::| |:|||@LB@ UGUUGUAGUGUUGGC UUCGG@LB@3'-UUU...UGUUG A UUUUC...UCA-5'@LB@ | |@LB@ 77 33@LB@@LB@@LB@Energy -13.53 kcal/mol@LB@Hybridization Energy -25.2172 kcal/mol@LB@Unfolding Energy - mRNA 7.66984 kcal/mol@LB@Unfolding Energy - sRNA 8.92374 kcal/mol@LB@@LB@Position - mRNA 247 -- 294@LB@Position - sRNA 34 -- 76@LB@Position Seed - mRNA 248 -- 254@LB@Position Seed - sRNA 69 -- 75@LB@ |
162 |
0.00849 |
0.1864 |
stm4221 |
pgi |
-15.16 |
0.111294 |
249 -- 289 |
56 -- 88 |
glucose-6-phosphate isomerase |
|
_____________248_______________________________________290\n_____________|_________________________________________|\n5'-GCU...UCCAG______U_____GAAAUGAAA_____________C______UUUCG...ACG-3'\n______________AAACAC_ACGAU_________GACGUUACGAUCG_UGAGCU\n______________||||||_||:|:_________:||:|:||:|:||_|:|||:\n______________UUUGUG_UGUUG_________UUGUAGUGUUGGC_AUUCGG\n3'-UUU...UAACG______U_____UG___________________________UUUUC...UCA-5'\n_____________|_________________________________________|\n_____________89________________________________________55\n |
272 -- 278 |
66 -- 72 |
-30.3131 kcal/mol |
6.22888 kcal/mol |
11.698 kcal/mol |
248 290@LB@ | |@LB@5'-GCU...UCCAG U GAAAUGAAA C UUUCG...ACG-3'@LB@ AAACAC ACGAU GACGUUACGAUCG UGAGCU@LB@ |||||| ||:|: :||:|:||:|:|| |:|||:@LB@ UUUGUG UGUUG UUGUAGUGUUGGC AUUCGG@LB@3'-UUU...UAACG U UG UUUUC...UCA-5'@LB@ | |@LB@ 89 55@LB@@LB@@LB@Energy -15.16 kcal/mol@LB@Hybridization Energy -30.3131 kcal/mol@LB@Unfolding Energy - mRNA 6.22888 kcal/mol@LB@Unfolding Energy - sRNA 11.698 kcal/mol@LB@@LB@Position - mRNA 249 -- 289@LB@Position - sRNA 56 -- 88@LB@Position Seed - mRNA 272 -- 278@LB@Position Seed - sRNA 66 -- 72@LB@ |
130 |
0.00652 |
0.1774 |
stm4228 |
malF |
-14.47 |
0.143021 |
162 -- 175 |
1 -- 15 |
maltose ABC transporter permease MalF |
|
_____________161_____________176\n_____________|_______________|\n5'-AAC...ACAUC_______________UUCAA...UAA-3'\n______________UCCGGC_CAGGAAGU\n______________||||||_||||||||\n______________AGGCCG_GUCCUUCA\n3'-UUU...AAGCA______A________-5'\n_____________|______________|\n_____________16_____________1\n |
169 -- 175 |
1 -- 7 |
-25.2779 kcal/mol |
6.67863 kcal/mol |
4.81264 kcal/mol |
161 176@LB@ | |@LB@5'-AAC...ACAUC UUCAA...UAA-3'@LB@ UCCGGC CAGGAAGU@LB@ |||||| ||||||||@LB@ AGGCCG GUCCUUCA@LB@3'-UUU...AAGCA A -5'@LB@ | |@LB@ 16 1@LB@@LB@@LB@Energy -14.47 kcal/mol@LB@Hybridization Energy -25.2779 kcal/mol@LB@Unfolding Energy - mRNA 6.67863 kcal/mol@LB@Unfolding Energy - sRNA 4.81264 kcal/mol@LB@@LB@Position - mRNA 162 -- 175@LB@Position - sRNA 1 -- 15@LB@Position Seed - mRNA 169 -- 175@LB@Position Seed - sRNA 1 -- 7@LB@ |
96 |
0.004303 |
0.1596 |
stm4243 |
yjbN |
-11.74 |
0.363864 |
272 -- 280 |
155 -- 163 |
tRNA dihydrouridine(20/20a) synthase DusA |
|
_____________271______________________________281\n_____________|________________________________|\n5'-UUA...UUAAU___AC_________C____A_____CCU____GGCAG...GUU-3'\n______________GGG____UGUACGG_GAAG_UGAAA___GGGG\n______________|||____|||||:|_||||_|||||___:|||\n______________CCC____ACAUGUC_CUUC_ACUUU___UCCC\n3'-UUU...UCUGU___AUUU__________________U______AUCAG...UCA-5'\n_____________|________________________________|\n_____________164______________________________154\n |
58 -- 64 |
141 -- 147 |
-26.0653 kcal/mol |
8.12251 kcal/mol |
7.07058 kcal/mol |
271 281@LB@ | |@LB@5'-UUA...UUAAU AC C A CCU GGCAG...GUU-3'@LB@ GGG UGUACGG GAAG UGAAA GGGG@LB@ ||| |||||:| |||| ||||| :|||@LB@ CCC ACAUGUC CUUC ACUUU UCCC@LB@3'-UUU...UCUGU AUUU U AUCAG...UCA-5'@LB@ | |@LB@ 164 154@LB@@LB@@LB@Energy -11.74 kcal/mol@LB@Hybridization Energy -26.0653 kcal/mol@LB@Unfolding Energy - mRNA 8.12251 kcal/mol@LB@Unfolding Energy - sRNA 7.07058 kcal/mol@LB@@LB@Position - mRNA 272 -- 280@LB@Position - sRNA 155 -- 163@LB@Position Seed - mRNA 58 -- 64@LB@Position Seed - sRNA 141 -- 147@LB@ |
13 |
0.0002148 |
0.05681 |
stm4275 |
acs |
-17.09 |
0.053801 |
176 -- 229 |
31 -- 87 |
acetate--CoA ligase |
|
_____________175___________________230\n_____________|_____________________|\n5'-UUA...UGAGC________UA______C____CCCGC...ACG-3'\n______________CAAACACA__AACACG_CAUU\n______________||||||||__|||||:_|||:\n______________GUUUGUGU__UUGUGU_GUAG\n3'-UUU...UUAAC________UG______U____UGUUG...UCA-5'\n_____________|_____________________|\n_____________88____________________30\n |
208 -- 214 |
82 -- 88 |
-19.539 kcal/mol |
0.409404 kcal/mol |
4.32311 kcal/mol |
175 230@LB@ | |@LB@5'-UUA...UGAGC UA C CCCGC...ACG-3'@LB@ CAAACACA AACACG CAUU@LB@ |||||||| |||||: |||:@LB@ GUUUGUGU UUGUGU GUAG@LB@3'-UUU...UUAAC UG U UGUUG...UCA-5'@LB@ | |@LB@ 88 30@LB@@LB@@LB@Energy -17.09 kcal/mol@LB@Hybridization Energy -19.539 kcal/mol@LB@Unfolding Energy - mRNA 0.409404 kcal/mol@LB@Unfolding Energy - sRNA 4.32311 kcal/mol@LB@@LB@Position - mRNA 176 -- 229@LB@Position - sRNA 31 -- 87@LB@Position Seed - mRNA 208 -- 214@LB@Position Seed - sRNA 82 -- 88@LB@ |
142 |
0.007269 |
0.182 |
stm4341 |
frdC |
-12.15 |
0.319206 |
131 -- 234 |
54 -- 160 |
fumarate reductase subunit C |
|
_____________130__________________235\n_____________|____________________|\n5'-AGA...AGGAG_______________UA___GCAAA...CGG-3'\n______________UGC_AACAUGACGAC__AAC\n______________|||_||||::||:||__|||\n______________ACG_UUGUGUUGUUG__UUG\n3'-UUU...GGUUA___U___________UG___UAGUG...UCA-5'\n_____________|____________________|\n_____________161__________________53\n |
202 -- 208 |
77 -- 83 |
-18.8897 kcal/mol |
4.02107 kcal/mol |
3.80548 kcal/mol |
130 235@LB@ | |@LB@5'-AGA...AGGAG UA GCAAA...CGG-3'@LB@ UGC AACAUGACGAC AAC@LB@ ||| ||||::||:|| |||@LB@ ACG UUGUGUUGUUG UUG@LB@3'-UUU...GGUUA U UG UAGUG...UCA-5'@LB@ | |@LB@ 161 53@LB@@LB@@LB@Energy -12.15 kcal/mol@LB@Hybridization Energy -18.8897 kcal/mol@LB@Unfolding Energy - mRNA 4.02107 kcal/mol@LB@Unfolding Energy - sRNA 3.80548 kcal/mol@LB@@LB@Position - mRNA 131 -- 234@LB@Position - sRNA 54 -- 160@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 77 -- 83@LB@ |