77 |
0.007102 |
0.3087 |
b0832 |
gsiD |
-8.78 |
0.192254 |
77 -- 85 |
7 -- 15 |
glutathione ABC transporter permease |
|
_____________76________86\n_____________|_________|\n5'-UUG...CGUAG_________AUUAC...GAU-3'\n______________AAAUGCGUG\n______________|||||||:|\n______________UUUACGCGC\n3'-UUU...UAUUG_________AGAAAG-5'\n_____________|_________|\n_____________16________6\n |
79 -- 85 |
7 -- 13 |
-12.0627 kcal/mol |
2.10506 kcal/mol |
1.17837 kcal/mol |
76 86@LB@ | |@LB@5'-UUG...CGUAG AUUAC...GAU-3'@LB@ AAAUGCGUG@LB@ |||||||:|@LB@ UUUACGCGC@LB@3'-UUU...UAUUG AGAAAG-5'@LB@ | |@LB@ 16 6@LB@@LB@@LB@Energy -8.78 kcal/mol@LB@Hybridization Energy -12.0627 kcal/mol@LB@Unfolding Energy - mRNA 2.10506 kcal/mol@LB@Unfolding Energy - sRNA 1.17837 kcal/mol@LB@@LB@Position - mRNA 77 -- 85@LB@Position - sRNA 7 -- 15@LB@Position Seed - mRNA 79 -- 85@LB@Position Seed - sRNA 7 -- 13@LB@ |
63 |
0.0059 |
0.3087 |
b3834 |
ubiJ |
-8.76 |
0.193647 |
289 -- 295 |
4 -- 10 |
aerobic ubiquinone synthesis protein SCP2 family protein |
|
_____________288_____296\n_____________|_______|\n5'-GCU...CCGCU_______GCUGG-3'\n______________CGCGUCU\n______________|||||||\n______________GCGCAGA\n3'-UUU...UUUAC_______AAG-5'\n_____________|_______|\n_____________11______3\n |
289 -- 295 |
4 -- 10 |
-11.2085 kcal/mol |
1.2993 kcal/mol |
1.14958 kcal/mol |
288 296@LB@ | |@LB@5'-GCU...CCGCU GCUGG-3'@LB@ CGCGUCU@LB@ |||||||@LB@ GCGCAGA@LB@3'-UUU...UUUAC AAG-5'@LB@ | |@LB@ 11 3@LB@@LB@@LB@Energy -8.76 kcal/mol@LB@Hybridization Energy -11.2085 kcal/mol@LB@Unfolding Energy - mRNA 1.2993 kcal/mol@LB@Unfolding Energy - sRNA 1.14958 kcal/mol@LB@@LB@Position - mRNA 289 -- 295@LB@Position - sRNA 4 -- 10@LB@Position Seed - mRNA 289 -- 295@LB@Position Seed - sRNA 4 -- 10@LB@ |
168 |
0.01645 |
0.3104 |
b3720 |
bglH |
-8.64 |
0.202347 |
15 -- 28 |
9 -- 22 |
carbohydrate-specific outer membrane porin cryptic |
|
_____________14_____________29\n_____________|______________|\n5'-AUU...GAUCG_________UG___AAGGA...GCC-3'\n______________UGAUGAUAA__GCG\n______________||||:|:||__|||\n______________ACUAUUGUU__CGC\n3'-UUU...CUACU_________UA___GCAGAAAG-5'\n_____________|______________|\n_____________23_____________8\n |
17 -- 23 |
14 -- 20 |
-13.7208 kcal/mol |
3.8428 kcal/mol |
1.23827 kcal/mol |
14 29@LB@ | |@LB@5'-AUU...GAUCG UG AAGGA...GCC-3'@LB@ UGAUGAUAA GCG@LB@ ||||:|:|| |||@LB@ ACUAUUGUU CGC@LB@3'-UUU...CUACU UA GCAGAAAG-5'@LB@ | |@LB@ 23 8@LB@@LB@@LB@Energy -8.64 kcal/mol@LB@Hybridization Energy -13.7208 kcal/mol@LB@Unfolding Energy - mRNA 3.8428 kcal/mol@LB@Unfolding Energy - sRNA 1.23827 kcal/mol@LB@@LB@Position - mRNA 15 -- 28@LB@Position - sRNA 9 -- 22@LB@Position Seed - mRNA 17 -- 23@LB@Position Seed - sRNA 14 -- 20@LB@ |
89 |
0.009028 |
0.3104 |
b0529 |
folD |
-8.62 |
0.203566 |
239 -- 251 |
4 -- 17 |
bifunctional 5 10-methylene-tetrahydrofolate dehydrogenase/ 5 10-methylene-tetrahydrofolate cyclohydrolase |
|
_____________238____________252\n_____________|______________|\n5'-CAA...GCGCA______________GAAGU...CAC-3'\n______________GCAGGUGCGC_UCU\n______________:||::|||||_|||\n______________UGUUUACGCG_AGA\n3'-UUU...ACUAU__________C___AAG-5'\n_____________|______________|\n_____________18_____________3\n |
242 -- 248 |
8 -- 14 |
-17.587 kcal/mol |
7.73476 kcal/mol |
1.22888 kcal/mol |
238 252@LB@ | |@LB@5'-CAA...GCGCA GAAGU...CAC-3'@LB@ GCAGGUGCGC UCU@LB@ :||::||||| |||@LB@ UGUUUACGCG AGA@LB@3'-UUU...ACUAU C AAG-5'@LB@ | |@LB@ 18 3@LB@@LB@@LB@Energy -8.62 kcal/mol@LB@Hybridization Energy -17.587 kcal/mol@LB@Unfolding Energy - mRNA 7.73476 kcal/mol@LB@Unfolding Energy - sRNA 1.22888 kcal/mol@LB@@LB@Position - mRNA 239 -- 251@LB@Position - sRNA 4 -- 17@LB@Position Seed - mRNA 242 -- 248@LB@Position Seed - sRNA 8 -- 14@LB@ |
114 |
0.01161 |
0.3104 |
b3392 |
hofP |
-8.60 |
0.204995 |
138 -- 147 |
1 -- 11 |
DNA catabolic protein |
|
_____________137_________148\n_____________|___________|\n5'-ACU...CGUGA___________GUUAA...GCG-3'\n______________GC_CGUUUUUC\n______________||_|||:||||\n______________CG_GCAGAAAG\n3'-UUU...GUUUA__C________-5'\n_____________|__________|\n_____________12_________1\n |
141 -- 147 |
1 -- 7 |
-12.6405 kcal/mol |
2.86562 kcal/mol |
1.17076 kcal/mol |
137 148@LB@ | |@LB@5'-ACU...CGUGA GUUAA...GCG-3'@LB@ GC CGUUUUUC@LB@ || |||:||||@LB@ CG GCAGAAAG@LB@3'-UUU...GUUUA C -5'@LB@ | |@LB@ 12 1@LB@@LB@@LB@Energy -8.60 kcal/mol@LB@Hybridization Energy -12.6405 kcal/mol@LB@Unfolding Energy - mRNA 2.86562 kcal/mol@LB@Unfolding Energy - sRNA 1.17076 kcal/mol@LB@@LB@Position - mRNA 138 -- 147@LB@Position - sRNA 1 -- 11@LB@Position Seed - mRNA 141 -- 147@LB@Position Seed - sRNA 1 -- 7@LB@ |
133 |
0.01287 |
0.3104 |
b3179 |
rlmE |
-8.60 |
0.205247 |
24 -- 43 |
1 -- 17 |
23S rRNA U2552 2'-O-ribose methyltransferase SAM-dependent |
|
_____________23___________________44\n_____________|____________________|\n5'-GCC...CUUGA__________CAGAC_____AGGUG...CCC-3'\n______________GCGGAUGUGC_____CUUUC\n______________:|::|||:||_____|||||\n______________UGUUUACGCG_____GAAAG\n3'-UUU...ACUAU__________CA________-5'\n_____________|___________________|\n_____________18__________________1\n |
27 -- 33 |
8 -- 14 |
-16.3409 kcal/mol |
6.50016 kcal/mol |
1.23994 kcal/mol |
23 44@LB@ | |@LB@5'-GCC...CUUGA CAGAC AGGUG...CCC-3'@LB@ GCGGAUGUGC CUUUC@LB@ :|::|||:|| |||||@LB@ UGUUUACGCG GAAAG@LB@3'-UUU...ACUAU CA -5'@LB@ | |@LB@ 18 1@LB@@LB@@LB@Energy -8.60 kcal/mol@LB@Hybridization Energy -16.3409 kcal/mol@LB@Unfolding Energy - mRNA 6.50016 kcal/mol@LB@Unfolding Energy - sRNA 1.23994 kcal/mol@LB@@LB@Position - mRNA 24 -- 43@LB@Position - sRNA 1 -- 17@LB@Position Seed - mRNA 27 -- 33@LB@Position Seed - sRNA 8 -- 14@LB@ |
163 |
0.0151 |
0.3104 |
b1517 |
lsrF |
-8.60 |
0.205199 |
166 -- 179 |
8 -- 21 |
putative autoinducer-2 (AI-2) aldolase |
|
_____________165____________180\n_____________|______________|\n5'-AAA...AAUAC___UU_U_______AUUAC...AUU-3'\n______________GAU__C_GAUGUGC\n______________|||__|_:|||:||\n______________CUA__G_UUACGCG\n3'-UUU...UACUA___UU_U_______CAGAAAG-5'\n_____________|______________|\n_____________22_____________7\n |
173 -- 179 |
8 -- 14 |
-12.6785 kcal/mol |
2.84069 kcal/mol |
1.23638 kcal/mol |
165 180@LB@ | |@LB@5'-AAA...AAUAC UU U AUUAC...AUU-3'@LB@ GAU C GAUGUGC@LB@ ||| | :|||:||@LB@ CUA G UUACGCG@LB@3'-UUU...UACUA UU U CAGAAAG-5'@LB@ | |@LB@ 22 7@LB@@LB@@LB@Energy -8.60 kcal/mol@LB@Hybridization Energy -12.6785 kcal/mol@LB@Unfolding Energy - mRNA 2.84069 kcal/mol@LB@Unfolding Energy - sRNA 1.23638 kcal/mol@LB@@LB@Position - mRNA 166 -- 179@LB@Position - sRNA 8 -- 21@LB@Position Seed - mRNA 173 -- 179@LB@Position Seed - sRNA 8 -- 14@LB@ |
43 |
0.003009 |
0.2325 |
b3429 |
glgA |
-8.59 |
0.206361 |
152 -- 163 |
7 -- 22 |
glycogen synthase |
|
_____________151______________164\n_____________|________________|\n5'-GUA...CGUGC________________AAAUG...ACG-3'\n______________UGGUAAC____GCGCG\n______________||:||||____|||||\n______________ACUAUUG____CGCGC\n3'-UUU...CUACU_______UUUA_____AGAAAG-5'\n_____________|________________|\n_____________23_______________6\n |
152 -- 158 |
16 -- 22 |
-13.429 kcal/mol |
3.59934 kcal/mol |
1.24379 kcal/mol |
151 164@LB@ | |@LB@5'-GUA...CGUGC AAAUG...ACG-3'@LB@ UGGUAAC GCGCG@LB@ ||:|||| |||||@LB@ ACUAUUG CGCGC@LB@3'-UUU...CUACU UUUA AGAAAG-5'@LB@ | |@LB@ 23 6@LB@@LB@@LB@Energy -8.59 kcal/mol@LB@Hybridization Energy -13.429 kcal/mol@LB@Unfolding Energy - mRNA 3.59934 kcal/mol@LB@Unfolding Energy - sRNA 1.24379 kcal/mol@LB@@LB@Position - mRNA 152 -- 163@LB@Position - sRNA 7 -- 22@LB@Position Seed - mRNA 152 -- 158@LB@Position Seed - sRNA 16 -- 22@LB@ |
197 |
0.01929 |
0.3104 |
b2185 |
rplY |
-8.58 |
0.206984 |
8 -- 20 |
7 -- 19 |
50S ribosomal subunit protein L25 |
|
_____________7_____________21\n_____________|_____________|\n____5'-CCAGUAC_____________AAAAA...GCA-3'\n______________UGGCAGGUGCGUG\n______________|::||::||||:|\n______________AUUGUUUACGCGC\n3'-UUU...CUACU_____________AGAAAG-5'\n_____________|_____________|\n_____________20____________6\n |
14 -- 20 |
7 -- 13 |
-17.3397 kcal/mol |
7.54262 kcal/mol |
1.21943 kcal/mol |
7 21@LB@ | |@LB@ 5'-CCAGUAC AAAAA...GCA-3'@LB@ UGGCAGGUGCGUG@LB@ |::||::||||:|@LB@ AUUGUUUACGCGC@LB@3'-UUU...CUACU AGAAAG-5'@LB@ | |@LB@ 20 6@LB@@LB@@LB@Energy -8.58 kcal/mol@LB@Hybridization Energy -17.3397 kcal/mol@LB@Unfolding Energy - mRNA 7.54262 kcal/mol@LB@Unfolding Energy - sRNA 1.21943 kcal/mol@LB@@LB@Position - mRNA 8 -- 20@LB@Position - sRNA 7 -- 19@LB@Position Seed - mRNA 14 -- 20@LB@Position Seed - sRNA 7 -- 13@LB@ |
122 |
0.01233 |
0.3104 |
b3599 |
mtlA |
-8.56 |
0.208645 |
247 -- 281 |
4 -- 32 |
mannitol-specific PTS enzyme: IIA IIB and IIC components |
|
_____________246_________________________________282\n_____________|___________________________________|\n5'-GAU...UUUCC____CAAC_________C_____AUCG________AUCGC...UCA-3'\n______________UCAG____AUGGUGAUG_CAAAU____GCGCGUUU\n______________||||____|||:||||:_|||||____||||||:|\n______________AGUC____UACUACUAU_GUUUA____CGCGCAGA\n3'-UUU...ACUUA____CC___________U_________________AAG-5'\n_____________|___________________________________|\n_____________33__________________________________3\n |
275 -- 281 |
4 -- 10 |
-27.4972 kcal/mol |
11.1013 kcal/mol |
7.84022 kcal/mol |
246 282@LB@ | |@LB@5'-GAU...UUUCC CAAC C AUCG AUCGC...UCA-3'@LB@ UCAG AUGGUGAUG CAAAU GCGCGUUU@LB@ |||| |||:||||: ||||| ||||||:|@LB@ AGUC UACUACUAU GUUUA CGCGCAGA@LB@3'-UUU...ACUUA CC U AAG-5'@LB@ | |@LB@ 33 3@LB@@LB@@LB@Energy -8.56 kcal/mol@LB@Hybridization Energy -27.4972 kcal/mol@LB@Unfolding Energy - mRNA 11.1013 kcal/mol@LB@Unfolding Energy - sRNA 7.84022 kcal/mol@LB@@LB@Position - mRNA 247 -- 281@LB@Position - sRNA 4 -- 32@LB@Position Seed - mRNA 275 -- 281@LB@Position Seed - sRNA 4 -- 10@LB@ |