| 137 |
0.007754 |
0.1993 |
b4024 |
lysC |
-8.53 |
0.257132 |
131 -- 141 |
73 -- 85 |
lysine-sensitive aspartokinase 3 |
|
_____________130___________142\n_____________|_____________|\n5'-UGA...UCGCU_____________CGUCU...UGC-3'\n______________CUGCGCC__CACC\n______________|||||||__||||\n______________GACGCGG__GUGG\n3'-UUU...CUUAU_______UU____UCCCU...GUG-5'\n_____________|_____________|\n_____________86____________72\n |
131 -- 137 |
79 -- 85 |
-18.3373 kcal/mol |
2.85158 kcal/mol |
6.95176 kcal/mol |
130 142@LB@ | |@LB@5'-UGA...UCGCU CGUCU...UGC-3'@LB@ CUGCGCC CACC@LB@ ||||||| ||||@LB@ GACGCGG GUGG@LB@3'-UUU...CUUAU UU UCCCU...GUG-5'@LB@ | |@LB@ 86 72@LB@@LB@@LB@Energy -8.53 kcal/mol@LB@Hybridization Energy -18.3373 kcal/mol@LB@Unfolding Energy - mRNA 2.85158 kcal/mol@LB@Unfolding Energy - sRNA 6.95176 kcal/mol@LB@@LB@Position - mRNA 131 -- 141@LB@Position - sRNA 73 -- 85@LB@Position Seed - mRNA 131 -- 137@LB@Position Seed - sRNA 79 -- 85@LB@ |
| 138 |
0.007886 |
0.2012 |
b3991 |
thiG |
-13.21 |
0.033127 |
237 -- 259 |
64 -- 85 |
thiamine biosynthesis ThiGH complex subunit |
|
_____________236______________________260\n_____________|________________________|\n5'-GCA...CACAU____UUA_________________CGCUU...CCG-3'\n______________CUGU___CCGGCA_CAGGGAAAUU\n______________|||:___||::||_|||||||||:\n______________GACG___GGUUGU_GUCCCUUUAG\n3'-UUU...CUUAU____C________G__________AACCG...GUG-5'\n_____________|________________________|\n_____________86_______________________63\n |
253 -- 259 |
64 -- 70 |
-25.8634 kcal/mol |
5.26561 kcal/mol |
7.38387 kcal/mol |
236 260@LB@ | |@LB@5'-GCA...CACAU UUA CGCUU...CCG-3'@LB@ CUGU CCGGCA CAGGGAAAUU@LB@ |||: ||::|| |||||||||:@LB@ GACG GGUUGU GUCCCUUUAG@LB@3'-UUU...CUUAU C G AACCG...GUG-5'@LB@ | |@LB@ 86 63@LB@@LB@@LB@Energy -13.21 kcal/mol@LB@Hybridization Energy -25.8634 kcal/mol@LB@Unfolding Energy - mRNA 5.26561 kcal/mol@LB@Unfolding Energy - sRNA 7.38387 kcal/mol@LB@@LB@Position - mRNA 237 -- 259@LB@Position - sRNA 64 -- 85@LB@Position Seed - mRNA 253 -- 259@LB@Position Seed - sRNA 64 -- 70@LB@ |
| 139 |
0.008022 |
0.2031 |
b0311 |
betA |
-9.91 |
0.144745 |
36 -- 54 |
64 -- 80 |
choline dehydrogenase a flavoprotein |
|
_____________35__________________55\n_____________|___________________|\n5'-CGU...CUGGA________U____C_____CCCGG...AAG-3'\n______________UCAACACC_GGGG_GAAUC\n______________:|||||||_:|||_:||||\n______________GGUUGUGG_UCCC_UUUAG\n3'-UUU...GACGC___________________AACCG...GUG-5'\n_____________|___________________|\n_____________81__________________63\n |
37 -- 43 |
73 -- 79 |
-20.9821 kcal/mol |
4.03056 kcal/mol |
7.04361 kcal/mol |
35 55@LB@ | |@LB@5'-CGU...CUGGA U C CCCGG...AAG-3'@LB@ UCAACACC GGGG GAAUC@LB@ :||||||| :||| :||||@LB@ GGUUGUGG UCCC UUUAG@LB@3'-UUU...GACGC AACCG...GUG-5'@LB@ | |@LB@ 81 63@LB@@LB@@LB@Energy -9.91 kcal/mol@LB@Hybridization Energy -20.9821 kcal/mol@LB@Unfolding Energy - mRNA 4.03056 kcal/mol@LB@Unfolding Energy - sRNA 7.04361 kcal/mol@LB@@LB@Position - mRNA 36 -- 54@LB@Position - sRNA 64 -- 80@LB@Position Seed - mRNA 37 -- 43@LB@Position Seed - sRNA 73 -- 79@LB@ |
| 140 |
0.008117 |
0.2031 |
b3221 |
yhcH |
-13.19 |
0.033484 |
158 -- 212 |
34 -- 73 |
DUF386 family protein cupin superfamily |
|
_____________157_____________________________________________________213\n_____________|_______________________________________________________|\n5'-AUC...UGAUG____UUUAC__GG___________UGGCCCAGGGAGAA_______G_________GAAGU...AAG-3'\n______________CAGG_____UU__GGCUGCGCUGU______________AAAUUAU_AUGAUGGGU\n______________||||_____|:__||||||||:||______________|||||||_||||||:||\n______________GUCC_____AG__CCGACGCGGCA______________UUUAAUA_UACUACUCA\n3'-UUU...UUGUG____CUUU___AA________________________________A_________AUGUU...GUG-5'\n_____________|_______________________________________________________|\n_____________74______________________________________________________33\n |
206 -- 212 |
34 -- 40 |
-41.3429 kcal/mol |
18.8865 kcal/mol |
9.26614 kcal/mol |
157 213@LB@ | |@LB@5'-AUC...UGAUG UUUAC GG UGGCCCAGGGAGAA G GAAGU...AAG-3'@LB@ CAGG UU GGCUGCGCUGU AAAUUAU AUGAUGGGU@LB@ |||| |: ||||||||:|| ||||||| ||||||:||@LB@ GUCC AG CCGACGCGGCA UUUAAUA UACUACUCA@LB@3'-UUU...UUGUG CUUU AA A AUGUU...GUG-5'@LB@ | |@LB@ 74 33@LB@@LB@@LB@Energy -13.19 kcal/mol@LB@Hybridization Energy -41.3429 kcal/mol@LB@Unfolding Energy - mRNA 18.8865 kcal/mol@LB@Unfolding Energy - sRNA 9.26614 kcal/mol@LB@@LB@Position - mRNA 158 -- 212@LB@Position - sRNA 34 -- 73@LB@Position Seed - mRNA 206 -- 212@LB@Position Seed - sRNA 34 -- 40@LB@ |
| 141 |
0.008132 |
0.2031 |
b3412 |
bioH |
-10.51 |
0.111302 |
230 -- 255 |
56 -- 74 |
pimeloyl-ACP methyl ester carboxylesterase |
|
_____________229________________________256\n_____________|__________________________|\n5'-GGC...AAAGG________AUGUUC______U_____UGCAC...ACG-3'\n______________UCAGGGGA______AUCUUG_GCUGC\n______________:|||||:|______||||||_|||||\n______________GGUCCCUU______UAGAAC_CGACG\n3'-UUU...GUUGU__________________________CGGCA...GUG-5'\n_____________|__________________________|\n_____________75_________________________55\n |
231 -- 237 |
67 -- 73 |
-25.2186 kcal/mol |
6.56983 kcal/mol |
8.13729 kcal/mol |
229 256@LB@ | |@LB@5'-GGC...AAAGG AUGUUC U UGCAC...ACG-3'@LB@ UCAGGGGA AUCUUG GCUGC@LB@ :|||||:| |||||| |||||@LB@ GGUCCCUU UAGAAC CGACG@LB@3'-UUU...GUUGU CGGCA...GUG-5'@LB@ | |@LB@ 75 55@LB@@LB@@LB@Energy -10.51 kcal/mol@LB@Hybridization Energy -25.2186 kcal/mol@LB@Unfolding Energy - mRNA 6.56983 kcal/mol@LB@Unfolding Energy - sRNA 8.13729 kcal/mol@LB@@LB@Position - mRNA 230 -- 255@LB@Position - sRNA 56 -- 74@LB@Position Seed - mRNA 231 -- 237@LB@Position Seed - sRNA 67 -- 73@LB@ |
| 142 |
0.00825 |
0.2033 |
b3457 |
livH |
-8.25 |
0.287512 |
56 -- 64 |
3 -- 11 |
branched-chain amino acid ABC transporter permease |
|
_____________55________65\n_____________|_________|\n5'-GAU...CGUGA_________UGAAC...ACG-3'\n______________UUGGGCCGC\n______________|::||||||\n______________AGUCCGGCG\n3'-UUU...CAAAA_________UG-5'\n_____________|_________|\n_____________12________2\n |
58 -- 64 |
3 -- 9 |
-16.0849 kcal/mol |
2.23282 kcal/mol |
5.54194 kcal/mol |
55 65@LB@ | |@LB@5'-GAU...CGUGA UGAAC...ACG-3'@LB@ UUGGGCCGC@LB@ |::||||||@LB@ AGUCCGGCG@LB@3'-UUU...CAAAA UG-5'@LB@ | |@LB@ 12 2@LB@@LB@@LB@Energy -8.25 kcal/mol@LB@Hybridization Energy -16.0849 kcal/mol@LB@Unfolding Energy - mRNA 2.23282 kcal/mol@LB@Unfolding Energy - sRNA 5.54194 kcal/mol@LB@@LB@Position - mRNA 56 -- 64@LB@Position - sRNA 3 -- 11@LB@Position Seed - mRNA 58 -- 64@LB@Position Seed - sRNA 3 -- 9@LB@ |
| 143 |
0.008308 |
0.2033 |
b2049 |
cpsB |
-11.81 |
0.062535 |
184 -- 242 |
25 -- 78 |
mannose-1-phosphate guanyltransferase |
|
_____________183_______________________________________________________________243\n_____________|_________________________________________________________________|\n5'-ACA...UAAAU____U_______U____A_______A________CUCUAUCCA__________________U___UCCGG...GCC-3'\n______________GAUA_UCGGGGA_AAUU_UGGC_GC_GUCG_AAA_________GUUGUGAUG____GCAGG_GGC\n______________:|:|_:|:||||_|||:_||||_||_|:||_|||_________:||:|||||____:||:|_|||\n______________UUGU_GGUCCCU_UUAG_ACCG_CG_CGGC_UUU_________UAAUACUAC____UGUUC_CCG\n3'-UUU...CGCGG_________________A____A_______A___AA________________UCAA_________UGUCG...GUG-5'\n_____________|_________________________________________________________________|\n_____________79________________________________________________________________24\n |
227 -- 233 |
37 -- 43 |
-41.0645 kcal/mol |
15.3492 kcal/mol |
13.8987 kcal/mol |
183 243@LB@ | |@LB@5'-ACA...UAAAU U U A A CUCUAUCCA U UCCGG...GCC-3'@LB@ GAUA UCGGGGA AAUU UGGC GC GUCG AAA GUUGUGAUG GCAGG GGC@LB@ :|:| :|:|||| |||: |||| || |:|| ||| :||:||||| :||:| |||@LB@ UUGU GGUCCCU UUAG ACCG CG CGGC UUU UAAUACUAC UGUUC CCG@LB@3'-UUU...CGCGG A A A AA UCAA UGUCG...GUG-5'@LB@ | |@LB@ 79 24@LB@@LB@@LB@Energy -11.81 kcal/mol@LB@Hybridization Energy -41.0645 kcal/mol@LB@Unfolding Energy - mRNA 15.3492 kcal/mol@LB@Unfolding Energy - sRNA 13.8987 kcal/mol@LB@@LB@Position - mRNA 184 -- 242@LB@Position - sRNA 25 -- 78@LB@Position Seed - mRNA 227 -- 233@LB@Position Seed - sRNA 37 -- 43@LB@ |
| 144 |
0.008344 |
0.2033 |
b3159 |
yhbV |
-10.12 |
0.132236 |
144 -- 228 |
15 -- 82 |
U32 peptidase family protein |
|
_____________143______________________________________________________________________________________229\n_____________|________________________________________________________________________________________|\n5'-GUG...AUGUC__AA_____G__AACCAC__________AUAUCA________GGCA_______AAA___AUGAAAUAUUCCUU_______________GGUAC...AUC-3'\n______________CG__GGCAC_CA______UCUUGGC_GC______CCGUAAAU____GUGA_GA___GCA______________AGGGC_CAGUGCUGU\n______________||__::|||_||______|||||||_||______||||||||____:|||_||___:||______________|||||_|||::||||\n______________GC__UUGUG_GU______AGAACCG_CG______GGCAUUUA____UACU_CU___UGU______________UCCCG_GUCGUGACA\n3'-UUU...AUGAC__GG________CCCUUU_______A__C_____________AUAA____A__CAA______________________U_________AAAAG...GUG-5'\n_____________|________________________________________________________________________________________|\n_____________83_______________________________________________________________________________________14\n |
177 -- 183 |
48 -- 54 |
-52.1529 kcal/mol |
19.8598 kcal/mol |
22.1763 kcal/mol |
143 229@LB@ | |@LB@5'-GUG...AUGUC AA G AACCAC AUAUCA GGCA AAA AUGAAAUAUUCCUU GGUAC...AUC-3'@LB@ CG GGCAC CA UCUUGGC GC CCGUAAAU GUGA GA GCA AGGGC CAGUGCUGU@LB@ || ::||| || ||||||| || |||||||| :||| || :|| ||||| |||::||||@LB@ GC UUGUG GU AGAACCG CG GGCAUUUA UACU CU UGU UCCCG GUCGUGACA@LB@3'-UUU...AUGAC GG CCCUUU A C AUAA A CAA U AAAAG...GUG-5'@LB@ | |@LB@ 83 14@LB@@LB@@LB@Energy -10.12 kcal/mol@LB@Hybridization Energy -52.1529 kcal/mol@LB@Unfolding Energy - mRNA 19.8598 kcal/mol@LB@Unfolding Energy - sRNA 22.1763 kcal/mol@LB@@LB@Position - mRNA 144 -- 228@LB@Position - sRNA 15 -- 82@LB@Position Seed - mRNA 177 -- 183@LB@Position Seed - sRNA 48 -- 54@LB@ |
| 145 |
0.008374 |
0.2033 |
b0068 |
thiB |
-7.61 |
0.367750 |
229 -- 244 |
73 -- 87 |
thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein |
|
_____________228______________245\n_____________|________________|\n5'-UUU...GCUGU________A_______CGUUU...ACU-3'\n______________UGCUGUGC_CAGCGCC\n______________|:|||:||_||:|:||\n______________AUGACGCG_GUUGUGG\n3'-UUU...CGCUU________________UCCCU...GUG-5'\n_____________|________________|\n_____________88_______________72\n |
230 -- 236 |
80 -- 86 |
-23.483 kcal/mol |
8.91653 kcal/mol |
6.95602 kcal/mol |
228 245@LB@ | |@LB@5'-UUU...GCUGU A CGUUU...ACU-3'@LB@ UGCUGUGC CAGCGCC@LB@ |:|||:|| ||:|:||@LB@ AUGACGCG GUUGUGG@LB@3'-UUU...CGCUU UCCCU...GUG-5'@LB@ | |@LB@ 88 72@LB@@LB@@LB@Energy -7.61 kcal/mol@LB@Hybridization Energy -23.483 kcal/mol@LB@Unfolding Energy - mRNA 8.91653 kcal/mol@LB@Unfolding Energy - sRNA 6.95602 kcal/mol@LB@@LB@Position - mRNA 229 -- 244@LB@Position - sRNA 73 -- 87@LB@Position Seed - mRNA 230 -- 236@LB@Position Seed - sRNA 80 -- 86@LB@ |
| 146 |
0.008611 |
0.2059 |
b3750 |
rbsC |
-8.88 |
0.223197 |
137 -- 159 |
56 -- 77 |
D-ribose ABC transporter permease |
|
_____________136_______________________160\n_____________|_________________________|\n5'-GAU...AGGCC_____________G_UAA_______CGCUG...UCU-3'\n______________AC_CCA_GGAAGU_U___UGGCUGC\n______________||_|||_||||:|_|___|||||||\n______________UG_GGU_CCUUUA_A___ACCGACG\n3'-UUU...GCGGU__U___C______G___________CGGCA...GUG-5'\n_____________|_________________________|\n_____________78________________________55\n |
153 -- 159 |
56 -- 62 |
-22.4095 kcal/mol |
5.11916 kcal/mol |
8.4081 kcal/mol |
136 160@LB@ | |@LB@5'-GAU...AGGCC G UAA CGCUG...UCU-3'@LB@ AC CCA GGAAGU U UGGCUGC@LB@ || ||| ||||:| | |||||||@LB@ UG GGU CCUUUA A ACCGACG@LB@3'-UUU...GCGGU U C G CGGCA...GUG-5'@LB@ | |@LB@ 78 55@LB@@LB@@LB@Energy -8.88 kcal/mol@LB@Hybridization Energy -22.4095 kcal/mol@LB@Unfolding Energy - mRNA 5.11916 kcal/mol@LB@Unfolding Energy - sRNA 8.4081 kcal/mol@LB@@LB@Position - mRNA 137 -- 159@LB@Position - sRNA 56 -- 77@LB@Position Seed - mRNA 153 -- 159@LB@Position Seed - sRNA 56 -- 62@LB@ |
