194 |
0.01081 |
0.197 |
stm1954 |
fliY |
-13.82 |
0.181182 |
183 -- 228 |
153 -- 193 |
cystine ABC transporter substrate-binding protein |
|
_____________182________________________229\n_____________|__________________________|\n5'-CAG...GUCUA_________AC____AUAUU______UACUA...UGC-3'\n______________UGGUCAUUA__GGCA_____CGGGGU\n______________|::|||:||__|:||_____|:||||\n______________AUUAGUGAU__CUGU_____GUCCCA\n3'-UUU...AUGUA_________AC____CU_________UUUAC...UCA-5'\n_____________|__________________________|\n_____________194________________________152\n |
173 -- 179 |
165 -- 171 |
-18.5851 kcal/mol |
4.12345 kcal/mol |
4.10259 kcal/mol |
182 229@LB@ | |@LB@5'-CAG...GUCUA AC AUAUU UACUA...UGC-3'@LB@ UGGUCAUUA GGCA CGGGGU@LB@ |::|||:|| |:|| |:||||@LB@ AUUAGUGAU CUGU GUCCCA@LB@3'-UUU...AUGUA AC CU UUUAC...UCA-5'@LB@ | |@LB@ 194 152@LB@@LB@@LB@Energy -13.82 kcal/mol@LB@Hybridization Energy -18.5851 kcal/mol@LB@Unfolding Energy - mRNA 4.12345 kcal/mol@LB@Unfolding Energy - sRNA 4.10259 kcal/mol@LB@@LB@Position - mRNA 183 -- 228@LB@Position - sRNA 153 -- 193@LB@Position Seed - mRNA 173 -- 179@LB@Position Seed - sRNA 165 -- 171@LB@ |
199 |
0.01101 |
0.197 |
stm3346 |
yhcM |
-12.83 |
0.254909 |
186 -- 228 |
33 -- 82 |
cell division protein ZapE |
|
_____________185____________________229\n_____________|______________________|\n5'-CAG...UUCAA_G__UA__________UAU___AAGCC...AAA-3'\n______________G_AA__ACAAUAACAU___GCA\n______________|_||__||||:||||:___:||\n______________C_UU__UGUUGUUGUG___UGU\n3'-UUU...GUUAA_G__UG__________U_____AGUGU...UCA-5'\n_____________|______________________|\n_____________83_____________________32\n |
193 -- 199 |
75 -- 81 |
-14.0954 kcal/mol |
2.45302 kcal/mol |
3.80671 kcal/mol |
185 229@LB@ | |@LB@5'-CAG...UUCAA G UA UAU AAGCC...AAA-3'@LB@ G AA ACAAUAACAU GCA@LB@ | || ||||:||||: :||@LB@ C UU UGUUGUUGUG UGU@LB@3'-UUU...GUUAA G UG U AGUGU...UCA-5'@LB@ | |@LB@ 83 32@LB@@LB@@LB@Energy -12.83 kcal/mol@LB@Hybridization Energy -14.0954 kcal/mol@LB@Unfolding Energy - mRNA 2.45302 kcal/mol@LB@Unfolding Energy - sRNA 3.80671 kcal/mol@LB@@LB@Position - mRNA 186 -- 228@LB@Position - sRNA 33 -- 82@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 75 -- 81@LB@ |
101 |
0.005112 |
0.1728 |
stm0113 |
leuA |
-13.72 |
0.187230 |
187 -- 230 |
37 -- 84 |
2-isopropylmalate synthase |
|
_____________186_____________________231\n_____________|_______________________|\n5'-AUA...UGGAG____G_____________G____AGCAA...UGG-3'\n______________ACAA_GAC_C_ACAUCAU_AGCC\n______________||||_:||_|_||||||:_|:||\n______________UGUU_UUG_G_UGUAGUG_UUGG\n3'-UUU...GUUUG____G___U_U____________CAUUC...UCA-5'\n_____________|_______________________|\n_____________85______________________36\n |
196 -- 202 |
67 -- 73 |
-19.8594 kcal/mol |
2.76514 kcal/mol |
8.15907 kcal/mol |
186 231@LB@ | |@LB@5'-AUA...UGGAG G G AGCAA...UGG-3'@LB@ ACAA GAC C ACAUCAU AGCC@LB@ |||| :|| | ||||||: |:||@LB@ UGUU UUG G UGUAGUG UUGG@LB@3'-UUU...GUUUG G U U CAUUC...UCA-5'@LB@ | |@LB@ 85 36@LB@@LB@@LB@Energy -13.72 kcal/mol@LB@Hybridization Energy -19.8594 kcal/mol@LB@Unfolding Energy - mRNA 2.76514 kcal/mol@LB@Unfolding Energy - sRNA 8.15907 kcal/mol@LB@@LB@Position - mRNA 187 -- 230@LB@Position - sRNA 37 -- 84@LB@Position Seed - mRNA 196 -- 202@LB@Position Seed - sRNA 67 -- 73@LB@ |
177 |
0.009665 |
0.1945 |
stm0079 |
yaaU |
-14.30 |
0.152587 |
187 -- 218 |
40 -- 79 |
MFS transporter |
|
_____________186___________219\n_____________|_____________|\n5'-GAA...GUUGA____G________CAUGC...UGC-3'\n______________AACA_GACAUCAC\n______________||||_:|||||||\n______________UUGU_UUGUAGUG\n3'-UUU...UGUUG____G________UUGGC...UCA-5'\n_____________|_____________|\n_____________80____________39\n |
193 -- 199 |
67 -- 73 |
-15.1412 kcal/mol |
3.61479 kcal/mol |
3.57243 kcal/mol |
186 219@LB@ | |@LB@5'-GAA...GUUGA G CAUGC...UGC-3'@LB@ AACA GACAUCAC@LB@ |||| :|||||||@LB@ UUGU UUGUAGUG@LB@3'-UUU...UGUUG G UUGGC...UCA-5'@LB@ | |@LB@ 80 39@LB@@LB@@LB@Energy -14.30 kcal/mol@LB@Hybridization Energy -15.1412 kcal/mol@LB@Unfolding Energy - mRNA 3.61479 kcal/mol@LB@Unfolding Energy - sRNA 3.57243 kcal/mol@LB@@LB@Position - mRNA 187 -- 218@LB@Position - sRNA 40 -- 79@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 67 -- 73@LB@ |
192 |
0.01067 |
0.197 |
stm2650 |
yfiP |
-13.22 |
0.223534 |
188 -- 232 |
36 -- 90 |
DTW domain-containing protein |
|
_____________187_________________________233\n_____________|___________________________|\n5'-UCA...UCUCC________UUUCUAUGACC________UGUCC...GCU-3'\n______________GCAAACGC___________AAUAACGC\n______________||||||:|___________||:|||:|\n______________CGUUUGUG___________UUGUUGUG\n3'-UUU...GUUAA___________________________UUGUA...UCA-5'\n_____________|___________________________|\n_____________91__________________________35\n |
208 -- 214 |
75 -- 81 |
-16.7007 kcal/mol |
3.95203 kcal/mol |
3.72363 kcal/mol |
187 233@LB@ | |@LB@5'-UCA...UCUCC UUUCUAUGACC UGUCC...GCU-3'@LB@ GCAAACGC AAUAACGC@LB@ ||||||:| ||:|||:|@LB@ CGUUUGUG UUGUUGUG@LB@3'-UUU...GUUAA UUGUA...UCA-5'@LB@ | |@LB@ 91 35@LB@@LB@@LB@Energy -13.22 kcal/mol@LB@Hybridization Energy -16.7007 kcal/mol@LB@Unfolding Energy - mRNA 3.95203 kcal/mol@LB@Unfolding Energy - sRNA 3.72363 kcal/mol@LB@@LB@Position - mRNA 188 -- 232@LB@Position - sRNA 36 -- 90@LB@Position Seed - mRNA 208 -- 214@LB@Position Seed - sRNA 75 -- 81@LB@ |
80 |
0.003756 |
0.1596 |
stm0132 |
ftsA |
-17.45 |
0.046754 |
189 -- 236 |
139 -- 186 |
cell division protein FtsA |
|
_____________188_______________________________________237\n_____________|_________________________________________|\n5'-AAU...GAACA___A______AG___C_________AAAACUG___G_____CUGGA...UCA-3'\n______________ACA_UGAUCA____G_GACGGACAG_______GUA_UAGGA\n______________|||_|:||||____|_|||:|||||_______|||_:||||\n______________UGU_AUUAGU____C_CUGUCUGUC_______CAU_GUCCU\n3'-UUU...CACGA___A______GAUA___________CCAUUUA_________UCACU...UCA-5'\n_____________|_________________________________________|\n_____________187_______________________________________138\n |
214 -- 220 |
154 -- 160 |
-27.6527 kcal/mol |
5.88434 kcal/mol |
5.72652 kcal/mol |
188 237@LB@ | |@LB@5'-AAU...GAACA A AG C AAAACUG G CUGGA...UCA-3'@LB@ ACA UGAUCA G GACGGACAG GUA UAGGA@LB@ ||| |:|||| | |||:||||| ||| :||||@LB@ UGU AUUAGU C CUGUCUGUC CAU GUCCU@LB@3'-UUU...CACGA A GAUA CCAUUUA UCACU...UCA-5'@LB@ | |@LB@ 187 138@LB@@LB@@LB@Energy -17.45 kcal/mol@LB@Hybridization Energy -27.6527 kcal/mol@LB@Unfolding Energy - mRNA 5.88434 kcal/mol@LB@Unfolding Energy - sRNA 5.72652 kcal/mol@LB@@LB@Position - mRNA 189 -- 236@LB@Position - sRNA 139 -- 186@LB@Position Seed - mRNA 214 -- 220@LB@Position Seed - sRNA 154 -- 160@LB@ |
144 |
0.00736 |
0.182 |
stm4559 |
yjjG |
-11.80 |
0.356804 |
189 -- 218 |
128 -- 159 |
putative haloacid dehalogenase-like hydrolase |
|
_____________188_________________________________219\n_____________|___________________________________|\n5'-UUG...AUAAA_G_____A____U__________________CU__AUUUU...UCA-3'\n______________A_AGGCA_GGUG_AAUG_AU__GAAGUGGGA__GG\n______________|_||:||_|||:_||||_|:__||||||::|__||\n______________U_UCUGU_CCAU_UUAC_UG__CUUCACUUU__CC\n3'-UUU...AUACC_G_____C_________A__UC_________UU__CAUCA...UCA-5'\n_____________|___________________________________|\n_____________160_________________________________127\n |
208 -- 214 |
132 -- 138 |
-24.694 kcal/mol |
5.33554 kcal/mol |
7.83417 kcal/mol |
188 219@LB@ | |@LB@5'-UUG...AUAAA G A U CU AUUUU...UCA-3'@LB@ A AGGCA GGUG AAUG AU GAAGUGGGA GG@LB@ | ||:|| |||: |||| |: ||||||::| ||@LB@ U UCUGU CCAU UUAC UG CUUCACUUU CC@LB@3'-UUU...AUACC G C A UC UU CAUCA...UCA-5'@LB@ | |@LB@ 160 127@LB@@LB@@LB@Energy -11.80 kcal/mol@LB@Hybridization Energy -24.694 kcal/mol@LB@Unfolding Energy - mRNA 5.33554 kcal/mol@LB@Unfolding Energy - sRNA 7.83417 kcal/mol@LB@@LB@Position - mRNA 189 -- 218@LB@Position - sRNA 128 -- 159@LB@Position Seed - mRNA 208 -- 214@LB@Position Seed - sRNA 132 -- 138@LB@ |
25 |
0.0006298 |
0.08814 |
stm3161 |
metC |
-13.21 |
0.223681 |
190 -- 249 |
35 -- 90 |
cystathionine beta-lyase |
|
_____________189__________________250\n_____________|____________________|\n5'-CAA...AACUG_________G__________AAAAA...CAC-3'\n______________GUAAACGCA__GACGCAGCA\n______________|:||||:||__:||:||:||\n______________CGUUUGUGU__UUGUGUUGU\n3'-UUU...GUUAA_________UG_________AGUGU...UCA-5'\n_____________|____________________|\n_____________91___________________34\n |
243 -- 249 |
71 -- 77 |
-21.5854 kcal/mol |
5.07977 kcal/mol |
3.80671 kcal/mol |
189 250@LB@ | |@LB@5'-CAA...AACUG G AAAAA...CAC-3'@LB@ GUAAACGCA GACGCAGCA@LB@ |:||||:|| :||:||:||@LB@ CGUUUGUGU UUGUGUUGU@LB@3'-UUU...GUUAA UG AGUGU...UCA-5'@LB@ | |@LB@ 91 34@LB@@LB@@LB@Energy -13.21 kcal/mol@LB@Hybridization Energy -21.5854 kcal/mol@LB@Unfolding Energy - mRNA 5.07977 kcal/mol@LB@Unfolding Energy - sRNA 3.80671 kcal/mol@LB@@LB@Position - mRNA 190 -- 249@LB@Position - sRNA 35 -- 90@LB@Position Seed - mRNA 243 -- 249@LB@Position Seed - sRNA 71 -- 77@LB@ |
74 |
0.003449 |
0.1596 |
stm1129 |
N/A |
-19.64 |
0.020096 |
190 -- 238 |
139 -- 186 |
N-acetylmannosamine-6-phosphate 2-epimerase |
stm3337 |
_____________189__________________________________239\n_____________|____________________________________|\n5'-AUA...UGGAU________UAGC_____U__AACA_________C__AAACG...AAA-3'\n______________GUCACUAU____CAGGC_GG____AAGUGUACA_GA\n______________:|||||||____|||:|_||____||:||||||_||\n______________UAGUGAUA____GUCUG_CC____UUUACAUGU_CU\n3'-UUU...GUAAU________CCU______U__CA___________C__UCACU...UCA-5'\n_____________|____________________________________|\n_____________187__________________________________138\n |
229 -- 235 |
142 -- 148 |
-26.4502 kcal/mol |
8.56913 kcal/mol |
5.67007 kcal/mol |
189 239@LB@ | |@LB@5'-AUA...UGGAU UAGC U AACA C AAACG...AAA-3'@LB@ GUCACUAU CAGGC GG AAGUGUACA GA@LB@ :||||||| |||:| || ||:|||||| ||@LB@ UAGUGAUA GUCUG CC UUUACAUGU CU@LB@3'-UUU...GUAAU CCU U CA C UCACU...UCA-5'@LB@ | |@LB@ 187 138@LB@@LB@@LB@Energy -19.64 kcal/mol@LB@Hybridization Energy -26.4502 kcal/mol@LB@Unfolding Energy - mRNA 8.56913 kcal/mol@LB@Unfolding Energy - sRNA 5.67007 kcal/mol@LB@@LB@Position - mRNA 190 -- 238@LB@Position - sRNA 139 -- 186@LB@Position Seed - mRNA 229 -- 235@LB@Position Seed - sRNA 142 -- 148@LB@ |
122 |
0.00604 |
0.1758 |
stm2353 |
hisQ |
-14.65 |
0.134227 |
190 -- 212 |
140 -- 163 |
amino acid ABC transporter permease |
|
_____________189______________________213\n_____________|________________________|\n5'-GAU...CAACA________UGCAUGU_________UUUUC...UCG-3'\n______________GGACAGGC________UGUACGGG\n______________||||||:|________|||||:||\n______________CCUGUCUG________ACAUGUCC\n3'-UUU...UGAUA________UCCCAUUU________UUCAC...UCA-5'\n_____________|________________________|\n_____________164______________________139\n |
206 -- 212 |
140 -- 146 |
-25.7393 kcal/mol |
6.65037 kcal/mol |
3.70771 kcal/mol |
189 213@LB@ | |@LB@5'-GAU...CAACA UGCAUGU UUUUC...UCG-3'@LB@ GGACAGGC UGUACGGG@LB@ ||||||:| |||||:||@LB@ CCUGUCUG ACAUGUCC@LB@3'-UUU...UGAUA UCCCAUUU UUCAC...UCA-5'@LB@ | |@LB@ 164 139@LB@@LB@@LB@Energy -14.65 kcal/mol@LB@Hybridization Energy -25.7393 kcal/mol@LB@Unfolding Energy - mRNA 6.65037 kcal/mol@LB@Unfolding Energy - sRNA 3.70771 kcal/mol@LB@@LB@Position - mRNA 190 -- 212@LB@Position - sRNA 140 -- 163@LB@Position Seed - mRNA 206 -- 212@LB@Position Seed - sRNA 140 -- 146@LB@ |