141 |
0.008132 |
0.2031 |
b3412 |
bioH |
-10.51 |
0.111302 |
230 -- 255 |
56 -- 74 |
pimeloyl-ACP methyl ester carboxylesterase |
|
_____________229________________________256\n_____________|__________________________|\n5'-GGC...AAAGG________AUGUUC______U_____UGCAC...ACG-3'\n______________UCAGGGGA______AUCUUG_GCUGC\n______________:|||||:|______||||||_|||||\n______________GGUCCCUU______UAGAAC_CGACG\n3'-UUU...GUUGU__________________________CGGCA...GUG-5'\n_____________|__________________________|\n_____________75_________________________55\n |
231 -- 237 |
67 -- 73 |
-25.2186 kcal/mol |
6.56983 kcal/mol |
8.13729 kcal/mol |
229 256@LB@ | |@LB@5'-GGC...AAAGG AUGUUC U UGCAC...ACG-3'@LB@ UCAGGGGA AUCUUG GCUGC@LB@ :|||||:| |||||| |||||@LB@ GGUCCCUU UAGAAC CGACG@LB@3'-UUU...GUUGU CGGCA...GUG-5'@LB@ | |@LB@ 75 55@LB@@LB@@LB@Energy -10.51 kcal/mol@LB@Hybridization Energy -25.2186 kcal/mol@LB@Unfolding Energy - mRNA 6.56983 kcal/mol@LB@Unfolding Energy - sRNA 8.13729 kcal/mol@LB@@LB@Position - mRNA 230 -- 255@LB@Position - sRNA 56 -- 74@LB@Position Seed - mRNA 231 -- 237@LB@Position Seed - sRNA 67 -- 73@LB@ |
69 |
0.003463 |
0.1727 |
b2346 |
mlaA |
-10.50 |
0.111973 |
167 -- 195 |
66 -- 86 |
ABC transporter maintaining OM lipid asymmetry OM lipoprotein component |
|
_____________166___________________________196\n_____________|_____________________________|\n5'-GCG...GGCAA_____AUAA____UAAAAAAA________CAUUU...AAG-3'\n______________ACUGC____GCCA________CAGGGAGA\n______________|||||____||||________||||||:|\n______________UGACG____CGGU________GUCCCUUU\n3'-UUU...GCUUA_____________UGUG____________AGAAC...GUG-5'\n_____________|_____________________________|\n_____________87____________________________65\n |
189 -- 195 |
66 -- 72 |
-21.8219 kcal/mol |
3.94189 kcal/mol |
7.38216 kcal/mol |
166 196@LB@ | |@LB@5'-GCG...GGCAA AUAA UAAAAAAA CAUUU...AAG-3'@LB@ ACUGC GCCA CAGGGAGA@LB@ ||||| |||| ||||||:|@LB@ UGACG CGGU GUCCCUUU@LB@3'-UUU...GCUUA UGUG AGAAC...GUG-5'@LB@ | |@LB@ 87 65@LB@@LB@@LB@Energy -10.50 kcal/mol@LB@Hybridization Energy -21.8219 kcal/mol@LB@Unfolding Energy - mRNA 3.94189 kcal/mol@LB@Unfolding Energy - sRNA 7.38216 kcal/mol@LB@@LB@Position - mRNA 167 -- 195@LB@Position - sRNA 66 -- 86@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 66 -- 72@LB@ |
124 |
0.006738 |
0.1913 |
b2533 |
suhB |
-10.44 |
0.114821 |
158 -- 166 |
51 -- 59 |
inositol monophosphatase |
|
_____________157_______167\n_____________|_________|\n5'-UUG...AUACU_________UUUCC...AGA-3'\n______________CUGCGCCGU\n______________|||||||||\n______________GACGCGGCA\n3'-UUU...GAACC_________UUUAA...GUG-5'\n_____________|_________|\n_____________60________50\n |
160 -- 166 |
51 -- 57 |
-17.2912 kcal/mol |
2.02049 kcal/mol |
4.83013 kcal/mol |
157 167@LB@ | |@LB@5'-UUG...AUACU UUUCC...AGA-3'@LB@ CUGCGCCGU@LB@ |||||||||@LB@ GACGCGGCA@LB@3'-UUU...GAACC UUUAA...GUG-5'@LB@ | |@LB@ 60 50@LB@@LB@@LB@Energy -10.44 kcal/mol@LB@Hybridization Energy -17.2912 kcal/mol@LB@Unfolding Energy - mRNA 2.02049 kcal/mol@LB@Unfolding Energy - sRNA 4.83013 kcal/mol@LB@@LB@Position - mRNA 158 -- 166@LB@Position - sRNA 51 -- 59@LB@Position Seed - mRNA 160 -- 166@LB@Position Seed - sRNA 51 -- 57@LB@ |
98 |
0.005208 |
0.1855 |
b4174 |
hflK |
-10.42 |
0.116019 |
265 -- 284 |
65 -- 83 |
modulator for HflB protease specific for phage lambda cII repressor |
|
_____________264__________________285\n_____________|____________________|\n5'-AGA...ACCUG___G____U__G________GGAAA...GUC-3'\n______________GCG_CAAC_CU_AGGGAAAU\n______________|||_||||_|:_||||||||\n______________CGC_GUUG_GG_UCCCUUUA\n3'-UUU...UAUGA___G____U___________GAACC...GUG-5'\n_____________|____________________|\n_____________84___________________64\n |
278 -- 284 |
65 -- 71 |
-24.0318 kcal/mol |
6.25533 kcal/mol |
7.35968 kcal/mol |
264 285@LB@ | |@LB@5'-AGA...ACCUG G U G GGAAA...GUC-3'@LB@ GCG CAAC CU AGGGAAAU@LB@ ||| |||| |: ||||||||@LB@ CGC GUUG GG UCCCUUUA@LB@3'-UUU...UAUGA G U GAACC...GUG-5'@LB@ | |@LB@ 84 64@LB@@LB@@LB@Energy -10.42 kcal/mol@LB@Hybridization Energy -24.0318 kcal/mol@LB@Unfolding Energy - mRNA 6.25533 kcal/mol@LB@Unfolding Energy - sRNA 7.35968 kcal/mol@LB@@LB@Position - mRNA 265 -- 284@LB@Position - sRNA 65 -- 83@LB@Position Seed - mRNA 278 -- 284@LB@Position Seed - sRNA 65 -- 71@LB@ |
171 |
0.01011 |
0.2071 |
b4086 |
alsC |
-10.38 |
0.118114 |
189 -- 207 |
53 -- 70 |
D-allose ABC transporter permease |
|
_____________188_________________208\n_____________|___________________|\n5'-CGC...GAAGA_______A____A__G___UUACC...CGA-3'\n______________GGAGAUU_UGGC_UG_GCU\n______________|||:||:_||||_||_||:\n______________CCUUUAG_ACCG_AC_CGG\n3'-UUU...UGGUC_______A_______G___CAUUU...GUG-5'\n_____________|___________________|\n_____________71__________________52\n |
189 -- 195 |
64 -- 70 |
-21.9341 kcal/mol |
4.72392 kcal/mol |
6.83419 kcal/mol |
188 208@LB@ | |@LB@5'-CGC...GAAGA A A G UUACC...CGA-3'@LB@ GGAGAUU UGGC UG GCU@LB@ |||:||: |||| || ||:@LB@ CCUUUAG ACCG AC CGG@LB@3'-UUU...UGGUC A G CAUUU...GUG-5'@LB@ | |@LB@ 71 52@LB@@LB@@LB@Energy -10.38 kcal/mol@LB@Hybridization Energy -21.9341 kcal/mol@LB@Unfolding Energy - mRNA 4.72392 kcal/mol@LB@Unfolding Energy - sRNA 6.83419 kcal/mol@LB@@LB@Position - mRNA 189 -- 207@LB@Position - sRNA 53 -- 70@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 64 -- 70@LB@ |
78 |
0.004296 |
0.1855 |
b3258 |
panF |
-10.37 |
0.118507 |
142 -- 153 |
52 -- 62 |
pantothenate:sodium symporter |
|
_____________141__________154\n_____________|____________|\n5'-GGC...UUUAU___A________GGCGA...UUA-3'\n______________UGG_CUGUGCUG\n______________|||_|||:||:|\n______________ACC_GACGCGGC\n3'-UUU...UUAGA____________AUUUA...GUG-5'\n_____________|____________|\n_____________63___________51\n |
147 -- 153 |
52 -- 58 |
-17.1407 kcal/mol |
1.89201 kcal/mol |
4.8804 kcal/mol |
141 154@LB@ | |@LB@5'-GGC...UUUAU A GGCGA...UUA-3'@LB@ UGG CUGUGCUG@LB@ ||| |||:||:|@LB@ ACC GACGCGGC@LB@3'-UUU...UUAGA AUUUA...GUG-5'@LB@ | |@LB@ 63 51@LB@@LB@@LB@Energy -10.37 kcal/mol@LB@Hybridization Energy -17.1407 kcal/mol@LB@Unfolding Energy - mRNA 1.89201 kcal/mol@LB@Unfolding Energy - sRNA 4.8804 kcal/mol@LB@@LB@Position - mRNA 142 -- 153@LB@Position - sRNA 52 -- 62@LB@Position Seed - mRNA 147 -- 153@LB@Position Seed - sRNA 52 -- 58@LB@ |
113 |
0.005997 |
0.1855 |
b1765 |
ydjA |
-10.36 |
0.119141 |
118 -- 144 |
49 -- 76 |
putative oxidoreductase |
|
_____________117___________________________145\n_____________|_____________________________|\n5'-AUU...CUUGU__G__________GC__A___________CAAAA...GUA-3'\n______________CA_CAGG__AAUU__GG_CUGUGCUGUAA\n______________||_||||__|||:__||_|||:||:||||\n______________GU_GUCC__UUAG__CC_GACGCGGCAUU\n3'-UUU...CGGUU__G____CU____AA______________UAAUA...GUG-5'\n_____________|_____________________________|\n_____________77____________________________48\n |
138 -- 144 |
49 -- 55 |
-28.7704 kcal/mol |
9.07167 kcal/mol |
9.34253 kcal/mol |
117 145@LB@ | |@LB@5'-AUU...CUUGU G GC A CAAAA...GUA-3'@LB@ CA CAGG AAUU GG CUGUGCUGUAA@LB@ || |||| |||: || |||:||:||||@LB@ GU GUCC UUAG CC GACGCGGCAUU@LB@3'-UUU...CGGUU G CU AA UAAUA...GUG-5'@LB@ | |@LB@ 77 48@LB@@LB@@LB@Energy -10.36 kcal/mol@LB@Hybridization Energy -28.7704 kcal/mol@LB@Unfolding Energy - mRNA 9.07167 kcal/mol@LB@Unfolding Energy - sRNA 9.34253 kcal/mol@LB@@LB@Position - mRNA 118 -- 144@LB@Position - sRNA 49 -- 76@LB@Position Seed - mRNA 138 -- 144@LB@Position Seed - sRNA 49 -- 55@LB@ |
175 |
0.01031 |
0.2074 |
b1834 |
yebT |
-10.32 |
0.121003 |
270 -- 282 |
51 -- 62 |
MCE domain protein |
|
_____________269___________283\n_____________|_____________|\n5'-UCU...CUUUC_______U_____UCAUC...UUG-3'\n______________UGGCUGC_GCCGU\n______________|||||||_|||||\n______________ACCGACG_CGGCA\n3'-UUU...UUAGA_____________UUUAA...GUG-5'\n_____________|_____________|\n_____________63____________50\n |
270 -- 276 |
56 -- 62 |
-21.4836 kcal/mol |
6.28034 kcal/mol |
4.8826 kcal/mol |
269 283@LB@ | |@LB@5'-UCU...CUUUC U UCAUC...UUG-3'@LB@ UGGCUGC GCCGU@LB@ ||||||| |||||@LB@ ACCGACG CGGCA@LB@3'-UUU...UUAGA UUUAA...GUG-5'@LB@ | |@LB@ 63 50@LB@@LB@@LB@Energy -10.32 kcal/mol@LB@Hybridization Energy -21.4836 kcal/mol@LB@Unfolding Energy - mRNA 6.28034 kcal/mol@LB@Unfolding Energy - sRNA 4.8826 kcal/mol@LB@@LB@Position - mRNA 270 -- 282@LB@Position - sRNA 51 -- 62@LB@Position Seed - mRNA 270 -- 276@LB@Position Seed - sRNA 56 -- 62@LB@ |
67 |
0.003373 |
0.1727 |
b0723 |
sdhA |
-10.29 |
0.122560 |
175 -- 204 |
36 -- 70 |
succinate dehydrogenase flavoprotein subunit |
|
_____________174_________________________________205\n_____________|___________________________________|\n5'-GGU...UUUAU___U____________G______GUG_________AAUUG...GUG-3'\n______________GGA__UC___GUUGUG_UGUGGG____UGUGAUGA\n______________|||__||___|:||:|_:||:::____|:||||||\n______________CCU__AG___CGACGC_GCAUUU____AUACUACU\n3'-UUU...UGGUC___UU__AAC______G______AAUA________CAAUG...GUG-5'\n_____________|___________________________________|\n_____________71__________________________________35\n |
198 -- 204 |
36 -- 42 |
-24.7755 kcal/mol |
5.81881 kcal/mol |
8.66537 kcal/mol |
174 205@LB@ | |@LB@5'-GGU...UUUAU U G GUG AAUUG...GUG-3'@LB@ GGA UC GUUGUG UGUGGG UGUGAUGA@LB@ ||| || |:||:| :||::: |:||||||@LB@ CCU AG CGACGC GCAUUU AUACUACU@LB@3'-UUU...UGGUC UU AAC G AAUA CAAUG...GUG-5'@LB@ | |@LB@ 71 35@LB@@LB@@LB@Energy -10.29 kcal/mol@LB@Hybridization Energy -24.7755 kcal/mol@LB@Unfolding Energy - mRNA 5.81881 kcal/mol@LB@Unfolding Energy - sRNA 8.66537 kcal/mol@LB@@LB@Position - mRNA 175 -- 204@LB@Position - sRNA 36 -- 70@LB@Position Seed - mRNA 198 -- 204@LB@Position Seed - sRNA 36 -- 42@LB@ |
122 |
0.006658 |
0.1913 |
b0600 |
ybdL |
-10.23 |
0.125775 |
275 -- 297 |
68 -- 86 |
methionine aminotransferase PLP-dependent |
|
_____________274_____________________298\n_____________|_______________________|\n5'-UCA...AGCGC___G____AG__________C__UUA-3'\n______________GCU_GCGC__CAACACCAGG_GA\n______________:||_||||__||||||||||_||\n______________UGA_CGCG__GUUGUGGUCC_CU\n3'-UUU...GCUUA_______________________UUAGA...GUG-5'\n_____________|_______________________|\n_____________87______________________67\n |
288 -- 294 |
70 -- 76 |
-27.7616 kcal/mol |
10.1544 kcal/mol |
7.37523 kcal/mol |
274 298@LB@ | |@LB@5'-UCA...AGCGC G AG C UUA-3'@LB@ GCU GCGC CAACACCAGG GA@LB@ :|| |||| |||||||||| ||@LB@ UGA CGCG GUUGUGGUCC CU@LB@3'-UUU...GCUUA UUAGA...GUG-5'@LB@ | |@LB@ 87 67@LB@@LB@@LB@Energy -10.23 kcal/mol@LB@Hybridization Energy -27.7616 kcal/mol@LB@Unfolding Energy - mRNA 10.1544 kcal/mol@LB@Unfolding Energy - sRNA 7.37523 kcal/mol@LB@@LB@Position - mRNA 275 -- 297@LB@Position - sRNA 68 -- 86@LB@Position Seed - mRNA 288 -- 294@LB@Position Seed - sRNA 70 -- 76@LB@ |