101 |
0.008451 |
0.2778 |
bsu32150 |
paiA |
-11.07 |
0.148459 |
77 -- 92 |
23 -- 39 |
protease synthase and sporulation negative regulatory protein PAI 1 |
|
_____________76________________93\n_____________|_________________|\n5'-AUU...AUCAC_______A______U__UGAAG...CAC-3'\n______________GAUAGGG__GUUGG_GA\n______________|||||:|__|||||_||\n______________CUAUCUC__CAACC_CU\n3'-UUU...CUAGA_______CC_____C__UGUCU...AUA-5'\n_____________|_________________|\n_____________40________________22\n |
77 -- 83 |
33 -- 39 |
-14.8457 kcal/mol |
2.98855 kcal/mol |
0.791731 kcal/mol |
76 93@LB@ | |@LB@5'-AUU...AUCAC A U UGAAG...CAC-3'@LB@ GAUAGGG GUUGG GA@LB@ |||||:| ||||| ||@LB@ CUAUCUC CAACC CU@LB@3'-UUU...CUAGA CC C UGUCU...AUA-5'@LB@ | |@LB@ 40 22@LB@@LB@@LB@Energy -11.07 kcal/mol@LB@Hybridization Energy -14.8457 kcal/mol@LB@Unfolding Energy - mRNA 2.98855 kcal/mol@LB@Unfolding Energy - sRNA 0.791731 kcal/mol@LB@@LB@Position - mRNA 77 -- 92@LB@Position - sRNA 23 -- 39@LB@Position Seed - mRNA 77 -- 83@LB@Position Seed - sRNA 33 -- 39@LB@ |
102 |
0.008773 |
0.2778 |
bsu06170 |
ydjE |
-10.58 |
0.175640 |
264 -- 284 |
30 -- 50 |
sugar kinase YdjE |
|
_____________263___________________285\n_____________|_____________________|\n5'-GGG...AUGUU__CG_______A_____A___CGCCA...AAA-3'\n______________GA__UUGAUUU_AUGGA_GGG\n______________||__|||||:|_||:||_|||\n______________CU__AACUAGA_UAUCU_CCC\n3'-UUU...AAAGC__AG_______C_____C___AACCC...AUA-5'\n_____________|_____________________|\n_____________51____________________29\n |
268 -- 274 |
40 -- 46 |
-17.5575 kcal/mol |
6.00068 kcal/mol |
0.974272 kcal/mol |
263 285@LB@ | |@LB@5'-GGG...AUGUU CG A A CGCCA...AAA-3'@LB@ GA UUGAUUU AUGGA GGG@LB@ || |||||:| ||:|| |||@LB@ CU AACUAGA UAUCU CCC@LB@3'-UUU...AAAGC AG C C AACCC...AUA-5'@LB@ | |@LB@ 51 29@LB@@LB@@LB@Energy -10.58 kcal/mol@LB@Hybridization Energy -17.5575 kcal/mol@LB@Unfolding Energy - mRNA 6.00068 kcal/mol@LB@Unfolding Energy - sRNA 0.974272 kcal/mol@LB@@LB@Position - mRNA 264 -- 284@LB@Position - sRNA 30 -- 50@LB@Position Seed - mRNA 268 -- 274@LB@Position Seed - sRNA 40 -- 46@LB@ |
103 |
0.008788 |
0.2778 |
bsu06070 |
ydiP |
-8.66 |
0.321247 |
183 -- 194 |
27 -- 44 |
BsuMI modification methylase subunit YdiP |
bsu20250 |
_____________182________________195\n_____________|__________________|\n5'-GGA...AAAAA__________________AUAUC...UGG-3'\n______________GAUUUGA______GGUUG\n______________|||:|||______|||||\n______________CUAGACU______CCAAC\n3'-UUU...UAGAA_______AUCUCC_____CCCUU...AUA-5'\n_____________|__________________|\n_____________45_________________26\n |
183 -- 189 |
38 -- 44 |
-12.3729 kcal/mol |
2.73997 kcal/mol |
0.971452 kcal/mol |
182 195@LB@ | |@LB@5'-GGA...AAAAA AUAUC...UGG-3'@LB@ GAUUUGA GGUUG@LB@ |||:||| |||||@LB@ CUAGACU CCAAC@LB@3'-UUU...UAGAA AUCUCC CCCUU...AUA-5'@LB@ | |@LB@ 45 26@LB@@LB@@LB@Energy -8.66 kcal/mol@LB@Hybridization Energy -12.3729 kcal/mol@LB@Unfolding Energy - mRNA 2.73997 kcal/mol@LB@Unfolding Energy - sRNA 0.971452 kcal/mol@LB@@LB@Position - mRNA 183 -- 194@LB@Position - sRNA 27 -- 44@LB@Position Seed - mRNA 183 -- 189@LB@Position Seed - sRNA 38 -- 44@LB@ |
104 |
0.009018 |
0.2778 |
bsu08080 |
acoC |
-12.10 |
0.101314 |
188 -- 194 |
30 -- 36 |
dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system |
|
_____________187_____195\n_____________|_______|\n5'-UGC...AUUAA_______ACACA...GAG-3'\n______________AGGGGGG\n______________||:||||\n______________UCUCCCC\n3'-UUU...GACUA_______AACCC...AUA-5'\n_____________|_______|\n_____________37______29\n |
188 -- 194 |
30 -- 36 |
-13.004 kcal/mol |
0.767034 kcal/mol |
0.133643 kcal/mol |
187 195@LB@ | |@LB@5'-UGC...AUUAA ACACA...GAG-3'@LB@ AGGGGGG@LB@ ||:||||@LB@ UCUCCCC@LB@3'-UUU...GACUA AACCC...AUA-5'@LB@ | |@LB@ 37 29@LB@@LB@@LB@Energy -12.10 kcal/mol@LB@Hybridization Energy -13.004 kcal/mol@LB@Unfolding Energy - mRNA 0.767034 kcal/mol@LB@Unfolding Energy - sRNA 0.133643 kcal/mol@LB@@LB@Position - mRNA 188 -- 194@LB@Position - sRNA 30 -- 36@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 30 -- 36@LB@ |
105 |
0.009074 |
0.2778 |
bsu03220 |
ycgO |
-6.59 |
0.539508 |
105 -- 111 |
67 -- 73 |
symporter |
|
_____________104_____112\n_____________|_______|\n5'-GAA...CCUGC_______UCCAU...GUG-3'\n______________GGGGGUG\n______________||||||:\n______________CCCCCAU\n3'-UUU...AACCG_______CGCGG...AUA-5'\n_____________|_______|\n_____________74______66\n |
105 -- 111 |
67 -- 73 |
-12.2711 kcal/mol |
3.65196 kcal/mol |
2.02624 kcal/mol |
104 112@LB@ | |@LB@5'-GAA...CCUGC UCCAU...GUG-3'@LB@ GGGGGUG@LB@ ||||||:@LB@ CCCCCAU@LB@3'-UUU...AACCG CGCGG...AUA-5'@LB@ | |@LB@ 74 66@LB@@LB@@LB@Energy -6.59 kcal/mol@LB@Hybridization Energy -12.2711 kcal/mol@LB@Unfolding Energy - mRNA 3.65196 kcal/mol@LB@Unfolding Energy - sRNA 2.02624 kcal/mol@LB@@LB@Position - mRNA 105 -- 111@LB@Position - sRNA 67 -- 73@LB@Position Seed - mRNA 105 -- 111@LB@Position Seed - sRNA 67 -- 73@LB@ |
106 |
0.009109 |
0.2778 |
bsu01390 |
infA |
-12.86 |
0.075307 |
175 -- 189 |
30 -- 45 |
translation initiation factor IF-1 |
|
_____________174______________190\n_____________|________________|\n5'-CCA...GUUAC____________A___AGAAC...UGG-3'\n______________UGAUUUGA_AGA_GGG\n______________||||:|||_|||_|||\n______________ACUAGACU_UCU_CCC\n3'-UUU...CUAGA________A___C___AACCC...AUA-5'\n_____________|________________|\n_____________46_______________29\n |
176 -- 182 |
38 -- 44 |
-16.3452 kcal/mol |
2.51395 kcal/mol |
0.969561 kcal/mol |
174 190@LB@ | |@LB@5'-CCA...GUUAC A AGAAC...UGG-3'@LB@ UGAUUUGA AGA GGG@LB@ ||||:||| ||| |||@LB@ ACUAGACU UCU CCC@LB@3'-UUU...CUAGA A C AACCC...AUA-5'@LB@ | |@LB@ 46 29@LB@@LB@@LB@Energy -12.86 kcal/mol@LB@Hybridization Energy -16.3452 kcal/mol@LB@Unfolding Energy - mRNA 2.51395 kcal/mol@LB@Unfolding Energy - sRNA 0.969561 kcal/mol@LB@@LB@Position - mRNA 175 -- 189@LB@Position - sRNA 30 -- 45@LB@Position Seed - mRNA 176 -- 182@LB@Position Seed - sRNA 38 -- 44@LB@ |
107 |
0.009163 |
0.2778 |
bsu12780 |
xepA |
-15.86 |
0.020153 |
79 -- 99 |
29 -- 48 |
phage-like element PBSX protein XepA |
|
_____________78____________________100\n_____________|_____________________|\n5'-UUG...UCAAU__AG_______C______U__GAACA...UUU-3'\n______________UC__GAUCUGG_AGAGGG_GU\n______________||__||||||:_||||||_||\n______________AG__CUAGACU_UCUCCC_CA\n3'-UUU...AGCCU__AA_______A_________ACCCC...AUA-5'\n_____________|_____________________|\n_____________49____________________28\n |
83 -- 89 |
38 -- 44 |
-22.9588 kcal/mol |
6.12286 kcal/mol |
0.974361 kcal/mol |
78 100@LB@ | |@LB@5'-UUG...UCAAU AG C U GAACA...UUU-3'@LB@ UC GAUCUGG AGAGGG GU@LB@ || ||||||: |||||| ||@LB@ AG CUAGACU UCUCCC CA@LB@3'-UUU...AGCCU AA A ACCCC...AUA-5'@LB@ | |@LB@ 49 28@LB@@LB@@LB@Energy -15.86 kcal/mol@LB@Hybridization Energy -22.9588 kcal/mol@LB@Unfolding Energy - mRNA 6.12286 kcal/mol@LB@Unfolding Energy - sRNA 0.974361 kcal/mol@LB@@LB@Position - mRNA 79 -- 99@LB@Position - sRNA 29 -- 48@LB@Position Seed - mRNA 83 -- 89@LB@Position Seed - sRNA 38 -- 44@LB@ |
108 |
0.009234 |
0.2778 |
bsu12360 |
exuT |
-9.24 |
0.271038 |
118 -- 128 |
32 -- 43 |
hexuronate transporter |
|
_____________117__________129\n_____________|____________|\n5'-AAA...UUCCU____________AUUUA...UUA-3'\n______________GUC_GAUGGAGG\n______________:||_|||:||||\n______________UAG_CUAUCUCC\n3'-UUU...AGAAC___A________CCAAC...AUA-5'\n_____________|____________|\n_____________44___________31\n |
122 -- 128 |
32 -- 38 |
-13.9988 kcal/mol |
3.80022 kcal/mol |
0.959872 kcal/mol |
117 129@LB@ | |@LB@5'-AAA...UUCCU AUUUA...UUA-3'@LB@ GUC GAUGGAGG@LB@ :|| |||:||||@LB@ UAG CUAUCUCC@LB@3'-UUU...AGAAC A CCAAC...AUA-5'@LB@ | |@LB@ 44 31@LB@@LB@@LB@Energy -9.24 kcal/mol@LB@Hybridization Energy -13.9988 kcal/mol@LB@Unfolding Energy - mRNA 3.80022 kcal/mol@LB@Unfolding Energy - sRNA 0.959872 kcal/mol@LB@@LB@Position - mRNA 118 -- 128@LB@Position - sRNA 32 -- 43@LB@Position Seed - mRNA 122 -- 128@LB@Position Seed - sRNA 32 -- 38@LB@ |
109 |
0.009307 |
0.2778 |
bsu07880 |
yfkJ |
-15.70 |
0.021808 |
288 -- 299 |
30 -- 51 |
low molecular weight protein-tyrosine-phosphatase YfkJ |
|
_____________287____________________300\n_____________|______________________|\n5'-GGU...AAAAA______________________A-3'\n______________GGAU__________UAGAGGGG\n______________||||__________||||||||\n______________CCUA__________AUCUCCCC\n3'-UUU...AAAAG____GAACUAGACU________AACCC...AUA-5'\n_____________|______________________|\n_____________52_____________________29\n |
293 -- 299 |
30 -- 36 |
-17.0834 kcal/mol |
0.412933 kcal/mol |
0.974282 kcal/mol |
287 300@LB@ | |@LB@5'-GGU...AAAAA A-3'@LB@ GGAU UAGAGGGG@LB@ |||| ||||||||@LB@ CCUA AUCUCCCC@LB@3'-UUU...AAAAG GAACUAGACU AACCC...AUA-5'@LB@ | |@LB@ 52 29@LB@@LB@@LB@Energy -15.70 kcal/mol@LB@Hybridization Energy -17.0834 kcal/mol@LB@Unfolding Energy - mRNA 0.412933 kcal/mol@LB@Unfolding Energy - sRNA 0.974282 kcal/mol@LB@@LB@Position - mRNA 288 -- 299@LB@Position - sRNA 30 -- 51@LB@Position Seed - mRNA 293 -- 299@LB@Position Seed - sRNA 30 -- 36@LB@ |
110 |
0.009311 |
0.2778 |
bsu18230 |
yngG |
-6.09 |
0.597733 |
269 -- 285 |
32 -- 53 |
hydroxymethylglutaryl-CoA lyase YngG |
|
_____________268____________________286\n_____________|______________________|\n5'-AAA...CCCGU_______GCAAC__________AUAAA...GGA-3'\n______________UUGGAUC__________AGAGG\n______________|:|||||__________|||||\n______________AGCCUAG__________UCUCC\n3'-UUU...AAAAA_______AACUAGACUA_____CCAAC...AUA-5'\n_____________|______________________|\n_____________54_____________________31\n |
269 -- 275 |
47 -- 53 |
-12.5955 kcal/mol |
5.52332 kcal/mol |
0.981755 kcal/mol |
268 286@LB@ | |@LB@5'-AAA...CCCGU GCAAC AUAAA...GGA-3'@LB@ UUGGAUC AGAGG@LB@ |:||||| |||||@LB@ AGCCUAG UCUCC@LB@3'-UUU...AAAAA AACUAGACUA CCAAC...AUA-5'@LB@ | |@LB@ 54 31@LB@@LB@@LB@Energy -6.09 kcal/mol@LB@Hybridization Energy -12.5955 kcal/mol@LB@Unfolding Energy - mRNA 5.52332 kcal/mol@LB@Unfolding Energy - sRNA 0.981755 kcal/mol@LB@@LB@Position - mRNA 269 -- 285@LB@Position - sRNA 32 -- 53@LB@Position Seed - mRNA 269 -- 275@LB@Position Seed - sRNA 47 -- 53@LB@ |