| 62 |
0.003053 |
0.1727 |
b3812 |
yigB |
-11.80 |
0.062766 |
182 -- 199 |
65 -- 83 |
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis |
|
_____________181_________________200\n_____________|___________________|\n5'-CUG...UCCAC__________G________AAUGC...GAG-3'\n______________GCGCCAA_AC_GGGGAAAU\n______________|||||||_||_:|||||||\n______________CGCGGUU_UG_UCCCUUUA\n3'-UUU...UAUGA_______G__G________GAACC...GUG-5'\n_____________|___________________|\n_____________84__________________64\n |
193 -- 199 |
65 -- 71 |
-28.1563 kcal/mol |
8.99645 kcal/mol |
7.35968 kcal/mol |
181 200@LB@ | |@LB@5'-CUG...UCCAC G AAUGC...GAG-3'@LB@ GCGCCAA AC GGGGAAAU@LB@ ||||||| || :|||||||@LB@ CGCGGUU UG UCCCUUUA@LB@3'-UUU...UAUGA G G GAACC...GUG-5'@LB@ | |@LB@ 84 64@LB@@LB@@LB@Energy -11.80 kcal/mol@LB@Hybridization Energy -28.1563 kcal/mol@LB@Unfolding Energy - mRNA 8.99645 kcal/mol@LB@Unfolding Energy - sRNA 7.35968 kcal/mol@LB@@LB@Position - mRNA 182 -- 199@LB@Position - sRNA 65 -- 83@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 65 -- 71@LB@ |
| 103 |
0.005609 |
0.1855 |
b2912 |
fau |
-11.92 |
0.059425 |
103 -- 124 |
64 -- 85 |
5-formyltetrahydrofolate cyclo-ligase family protein |
|
_____________102____________________125\n_____________|______________________|\n5'-GAA...ACAGC_____G_______UC_______CCCUU...UGG-3'\n______________CUGCG_CGGCAUC__GGAGAUU\n______________|||||_|::||:|__|||:||:\n______________GACGC_GUUGUGG__CCUUUAG\n3'-UUU...CUUAU_____G_______UC_______AACCG...GUG-5'\n_____________|______________________|\n_____________86_____________________63\n |
118 -- 124 |
64 -- 70 |
-27.7471 kcal/mol |
8.44142 kcal/mol |
7.38387 kcal/mol |
102 125@LB@ | |@LB@5'-GAA...ACAGC G UC CCCUU...UGG-3'@LB@ CUGCG CGGCAUC GGAGAUU@LB@ ||||| |::||:| |||:||:@LB@ GACGC GUUGUGG CCUUUAG@LB@3'-UUU...CUUAU G UC AACCG...GUG-5'@LB@ | |@LB@ 86 63@LB@@LB@@LB@Energy -11.92 kcal/mol@LB@Hybridization Energy -27.7471 kcal/mol@LB@Unfolding Energy - mRNA 8.44142 kcal/mol@LB@Unfolding Energy - sRNA 7.38387 kcal/mol@LB@@LB@Position - mRNA 103 -- 124@LB@Position - sRNA 64 -- 85@LB@Position Seed - mRNA 118 -- 124@LB@Position Seed - sRNA 64 -- 70@LB@ |
| 99 |
0.005465 |
0.1855 |
b0767 |
pgl |
-9.37 |
0.182441 |
275 -- 291 |
70 -- 86 |
6-phosphogluconolactonase |
|
_____________274________________292\n_____________|__________________|\n5'-UCA...GGCGC____A_____________UUGUC...AUG-3'\n______________ACUG_CGCUGACA_CAGG\n______________||||_|||::|||_||||\n______________UGAC_GCGGUUGU_GUCC\n3'-UUU...GCUUA_____________G____CUUUA...GUG-5'\n_____________|__________________|\n_____________87_________________69\n |
281 -- 287 |
75 -- 81 |
-21.4952 kcal/mol |
4.85205 kcal/mol |
7.27772 kcal/mol |
274 292@LB@ | |@LB@5'-UCA...GGCGC A UUGUC...AUG-3'@LB@ ACUG CGCUGACA CAGG@LB@ |||| |||::||| ||||@LB@ UGAC GCGGUUGU GUCC@LB@3'-UUU...GCUUA G CUUUA...GUG-5'@LB@ | |@LB@ 87 69@LB@@LB@@LB@Energy -9.37 kcal/mol@LB@Hybridization Energy -21.4952 kcal/mol@LB@Unfolding Energy - mRNA 4.85205 kcal/mol@LB@Unfolding Energy - sRNA 7.27772 kcal/mol@LB@@LB@Position - mRNA 275 -- 291@LB@Position - sRNA 70 -- 86@LB@Position Seed - mRNA 281 -- 287@LB@Position Seed - sRNA 75 -- 81@LB@ |
| 91 |
0.004841 |
0.1855 |
b3194 |
mlaE |
-9.16 |
0.198986 |
180 -- 189 |
67 -- 76 |
ABC transporter maintaining OM lipid asymmetry inner membrane permease protein |
|
_____________179________190\n_____________|__________|\n5'-GGA...UCUUU__________UUAAG...GCA-3'\n______________UACCAGGGAG\n______________:||||||||:\n______________GUGGUCCCUU\n3'-UUU...CGGUU__________UAGAA...GUG-5'\n_____________|__________|\n_____________77_________66\n |
183 -- 189 |
67 -- 73 |
-15.9485 kcal/mol |
2.86999 kcal/mol |
3.9178 kcal/mol |
179 190@LB@ | |@LB@5'-GGA...UCUUU UUAAG...GCA-3'@LB@ UACCAGGGAG@LB@ :||||||||:@LB@ GUGGUCCCUU@LB@3'-UUU...CGGUU UAGAA...GUG-5'@LB@ | |@LB@ 77 66@LB@@LB@@LB@Energy -9.16 kcal/mol@LB@Hybridization Energy -15.9485 kcal/mol@LB@Unfolding Energy - mRNA 2.86999 kcal/mol@LB@Unfolding Energy - sRNA 3.9178 kcal/mol@LB@@LB@Position - mRNA 180 -- 189@LB@Position - sRNA 67 -- 76@LB@Position Seed - mRNA 183 -- 189@LB@Position Seed - sRNA 67 -- 73@LB@ |
| 69 |
0.003463 |
0.1727 |
b2346 |
mlaA |
-10.50 |
0.111973 |
167 -- 195 |
66 -- 86 |
ABC transporter maintaining OM lipid asymmetry OM lipoprotein component |
|
_____________166___________________________196\n_____________|_____________________________|\n5'-GCG...GGCAA_____AUAA____UAAAAAAA________CAUUU...AAG-3'\n______________ACUGC____GCCA________CAGGGAGA\n______________|||||____||||________||||||:|\n______________UGACG____CGGU________GUCCCUUU\n3'-UUU...GCUUA_____________UGUG____________AGAAC...GUG-5'\n_____________|_____________________________|\n_____________87____________________________65\n |
189 -- 195 |
66 -- 72 |
-21.8219 kcal/mol |
3.94189 kcal/mol |
7.38216 kcal/mol |
166 196@LB@ | |@LB@5'-GCG...GGCAA AUAA UAAAAAAA CAUUU...AAG-3'@LB@ ACUGC GCCA CAGGGAGA@LB@ ||||| |||| ||||||:|@LB@ UGACG CGGU GUCCCUUU@LB@3'-UUU...GCUUA UGUG AGAAC...GUG-5'@LB@ | |@LB@ 87 65@LB@@LB@@LB@Energy -10.50 kcal/mol@LB@Hybridization Energy -21.8219 kcal/mol@LB@Unfolding Energy - mRNA 3.94189 kcal/mol@LB@Unfolding Energy - sRNA 7.38216 kcal/mol@LB@@LB@Position - mRNA 167 -- 195@LB@Position - sRNA 66 -- 86@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 66 -- 72@LB@ |
| 87 |
0.004792 |
0.1855 |
b0476 |
aes |
-9.71 |
0.157345 |
34 -- 55 |
56 -- 76 |
acetyl esterase |
|
_____________33______________________56\n_____________|_______________________|\n5'-CGU...ACGUU______________CA_______UUUUA...CAA-3'\n______________UACC_GGGAAAUUU__UGGUUGU\n______________:|||_|||||||:|__|||:||:\n______________GUGG_CCCUUUAGA__ACCGACG\n3'-UUU...CGGUU____U__________________CGGCA...GUG-5'\n_____________|_______________________|\n_____________77______________________55\n |
49 -- 55 |
56 -- 62 |
-24.1621 kcal/mol |
6.04137 kcal/mol |
8.40711 kcal/mol |
33 56@LB@ | |@LB@5'-CGU...ACGUU CA UUUUA...CAA-3'@LB@ UACC GGGAAAUUU UGGUUGU@LB@ :||| |||||||:| |||:||:@LB@ GUGG CCCUUUAGA ACCGACG@LB@3'-UUU...CGGUU U CGGCA...GUG-5'@LB@ | |@LB@ 77 55@LB@@LB@@LB@Energy -9.71 kcal/mol@LB@Hybridization Energy -24.1621 kcal/mol@LB@Unfolding Energy - mRNA 6.04137 kcal/mol@LB@Unfolding Energy - sRNA 8.40711 kcal/mol@LB@@LB@Position - mRNA 34 -- 55@LB@Position - sRNA 56 -- 76@LB@Position Seed - mRNA 49 -- 55@LB@Position Seed - sRNA 56 -- 62@LB@ |
| 43 |
0.002187 |
0.1727 |
b2222 |
atoA |
-7.38 |
0.400797 |
260 -- 273 |
68 -- 82 |
acetyl-CoA:acetoacetyl-CoA transferase beta subunit |
|
_____________259_____________274\n_____________|_______________|\n5'-CGC...GACAU_______________UCGGU...AUU-3'\n______________CGUUAAC_UUAGGGA\n______________||::|||_::|||||\n______________GCGGUUG_GGUCCCU\n3'-UUU...AUGAC_______U_______UUAGA...GUG-5'\n_____________|_______________|\n_____________83______________67\n |
267 -- 273 |
68 -- 74 |
-16.5153 kcal/mol |
2.15948 kcal/mol |
6.98098 kcal/mol |
259 274@LB@ | |@LB@5'-CGC...GACAU UCGGU...AUU-3'@LB@ CGUUAAC UUAGGGA@LB@ ||::||| ::|||||@LB@ GCGGUUG GGUCCCU@LB@3'-UUU...AUGAC U UUAGA...GUG-5'@LB@ | |@LB@ 83 67@LB@@LB@@LB@Energy -7.38 kcal/mol@LB@Hybridization Energy -16.5153 kcal/mol@LB@Unfolding Energy - mRNA 2.15948 kcal/mol@LB@Unfolding Energy - sRNA 6.98098 kcal/mol@LB@@LB@Position - mRNA 260 -- 273@LB@Position - sRNA 68 -- 82@LB@Position Seed - mRNA 267 -- 273@LB@Position Seed - sRNA 68 -- 74@LB@ |
| 4 |
3.471e-06 |
0.003055 |
b2099 |
yegU |
-19.38 |
0.001997 |
173 -- 198 |
64 -- 88 |
ADP-ribosylglycohydrolase family protein |
|
_____________172________________________199\n_____________|__________________________|\n5'-GUG...UCGCG_______________AA_________AAAUG...CAC-3'\n______________AUAUUGCGUUGACAC__GGGGAAGUU\n______________|||:||||:::||||__:|||||:|:\n______________UAUGACGCGGUUGUG__UCCCUUUAG\n3'-UUU...GCGCU_______________G__________AACCG...GUG-5'\n_____________|__________________________|\n_____________89_________________________63\n |
192 -- 198 |
64 -- 70 |
-32.1286 kcal/mol |
5.35868 kcal/mol |
7.38555 kcal/mol |
172 199@LB@ | |@LB@5'-GUG...UCGCG AA AAAUG...CAC-3'@LB@ AUAUUGCGUUGACAC GGGGAAGUU@LB@ |||:||||:::|||| :|||||:|:@LB@ UAUGACGCGGUUGUG UCCCUUUAG@LB@3'-UUU...GCGCU G AACCG...GUG-5'@LB@ | |@LB@ 89 63@LB@@LB@@LB@Energy -19.38 kcal/mol@LB@Hybridization Energy -32.1286 kcal/mol@LB@Unfolding Energy - mRNA 5.35868 kcal/mol@LB@Unfolding Energy - sRNA 7.38555 kcal/mol@LB@@LB@Position - mRNA 173 -- 198@LB@Position - sRNA 64 -- 88@LB@Position Seed - mRNA 192 -- 198@LB@Position Seed - sRNA 64 -- 70@LB@ |
| 119 |
0.006508 |
0.1913 |
b3834 |
ubiJ |
-9.73 |
0.156135 |
145 -- 181 |
28 -- 78 |
aerobic ubiquinone synthesis protein SCP2 family protein |
|
_____________144_________________________________________________182\n_____________|___________________________________________________|\n5'-GCU...AAUCU____G______UUGUGGC_____A___________________________UUCUG...UGG-3'\n______________GACG_CAGGGG_______GCUGC_UCGU______________GGUUAUAAG\n______________:||:_|||||:_______|||||_:|||______________:||||:|||\n______________UUGU_GUCCCU_______CGACG_GGCA______________UCAAUGUUC\n3'-UUU...CGCGG____G______UUAGAAC_____C____UUUAAUAAUACUAC_________CCGUG...GUG-5'\n_____________|___________________________________________________|\n_____________79__________________________________________________27\n |
175 -- 181 |
28 -- 34 |
-33.2852 kcal/mol |
14.1676 kcal/mol |
9.38606 kcal/mol |
144 182@LB@ | |@LB@5'-GCU...AAUCU G UUGUGGC A UUCUG...UGG-3'@LB@ GACG CAGGGG GCUGC UCGU GGUUAUAAG@LB@ :||: |||||: ||||| :||| :||||:|||@LB@ UUGU GUCCCU CGACG GGCA UCAAUGUUC@LB@3'-UUU...CGCGG G UUAGAAC C UUUAAUAAUACUAC CCGUG...GUG-5'@LB@ | |@LB@ 79 27@LB@@LB@@LB@Energy -9.73 kcal/mol@LB@Hybridization Energy -33.2852 kcal/mol@LB@Unfolding Energy - mRNA 14.1676 kcal/mol@LB@Unfolding Energy - sRNA 9.38606 kcal/mol@LB@@LB@Position - mRNA 145 -- 181@LB@Position - sRNA 28 -- 78@LB@Position Seed - mRNA 175 -- 181@LB@Position Seed - sRNA 28 -- 34@LB@ |
| 19 |
0.001118 |
0.1727 |
b2455 |
eutE |
-12.39 |
0.048028 |
37 -- 59 |
68 -- 89 |
aldehyde oxidoreductase ethanolamine utilization protein |
|
_____________36______________________60\n_____________|_______________________|\n5'-GGU...UCGAC_______G___G__A________GUGGG...UCG-3'\n______________AAUAUUG_CGC_GG_ACCGGGGA\n______________||||:||_|||_::_|||:||||\n______________UUAUGAC_GCG_UU_UGGUCCCU\n3'-UUU...CGCGC___________G__G________UUAGA...GUG-5'\n_____________|_______________________|\n_____________90______________________67\n |
37 -- 43 |
83 -- 89 |
-25.7412 kcal/mol |
5.46666 kcal/mol |
7.88032 kcal/mol |
36 60@LB@ | |@LB@5'-GGU...UCGAC G G A GUGGG...UCG-3'@LB@ AAUAUUG CGC GG ACCGGGGA@LB@ ||||:|| ||| :: |||:||||@LB@ UUAUGAC GCG UU UGGUCCCU@LB@3'-UUU...CGCGC G G UUAGA...GUG-5'@LB@ | |@LB@ 90 67@LB@@LB@@LB@Energy -12.39 kcal/mol@LB@Hybridization Energy -25.7412 kcal/mol@LB@Unfolding Energy - mRNA 5.46666 kcal/mol@LB@Unfolding Energy - sRNA 7.88032 kcal/mol@LB@@LB@Position - mRNA 37 -- 59@LB@Position - sRNA 68 -- 89@LB@Position Seed - mRNA 37 -- 43@LB@Position Seed - sRNA 83 -- 89@LB@ |
